FFCP PHASE1:Hg19::chr8:30300119..30300137,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJ31 | |||
|association_with_transcript=0bp_to_ENST00000520191_5end | |||
|description=CAGE_peak_11_at_RBPMS_5end | |||
|id=chr8:30300119..30300137,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.10e-13!6;CL:0002138!1.10e-13!6;CL:0005022!1.10e-13!6;CL:0002139!3.90e-11!24;CL:0002322!1.08e-09!5;CL:0000115!2.53e-09!35;CL:0002144!7.69e-08!3;CL:0002078!7.75e-08!44;CL:0002618!1.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.21e-39;6!CL:0002139;8.25e-31;24!CL:0002144;4.69e-29;3!CL:0000115;1.61e-17;36!CL:0000540;2.77e-15;6!CL:0000404;2.77e-15;6!CL:0002078;2.33e-14;45!CL:0000213;5.53e-09;58!CL:0000215;5.53e-09;58!CL:0000071;1.20e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,6.42e-40,6;CL:0002138,6.42e-40,6;CL:0005022,6.42e-40,6;CL:0002139,7.06e-31,24;CL:0002144,4.28e-29,3;CL:0000115,4.42e-25,36;CL:0002078,8.75e-20,45;CL:0000540,2.85e-15,6;CL:0000031,2.85e-15,6;CL:0000404,2.85e-15,6;CL:0000213,4.99e-15,58;CL:0000215,4.99e-15,58;CL:0000047,1.36e-11,8;CL:0000071,1.29e-08,18;CL:0002546,1.29e-08,18 | |||
|ontology_enrichment_development_v019=CL:0005022;1.21e-39;6!CL:0000031;2.77e-15;6!UBERON:0010226;9.49e-11;1!UBERON:0006242;9.49e-11;1!CL:0002546;1.20e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-17!115;UBERON:0002465!3.27e-10!10;UBERON:0001473!5.22e-10!8;UBERON:0004536!5.22e-10!8;UBERON:0006558!5.22e-10!8;UBERON:0003135!3.99e-08!11;UBERON:0001915!7.69e-08!3;UBERON:0001982!7.69e-08!3;UBERON:0003103!3.86e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;9.50e-30;8!UBERON:0004536;9.50e-30;8!UBERON:0006558;9.50e-30;8!UBERON:0010523;4.69e-29;3!UBERON:0001915;4.69e-29;3!UBERON:0001982;4.69e-29;3!UBERON:0002465;8.38e-24;10!UBERON:0004151;1.70e-13;3!UBERON:0002084;9.49e-11;1!UBERON:0002134;9.49e-11;1!UBERON:0002082;9.49e-11;1!UBERON:0005208;9.49e-11;1!UBERON:0004145;9.49e-11;1!UBERON:0005946;9.49e-11;1!UBERON:0005965;9.49e-11;1!UBERON:0002078;9.49e-11;1!UBERON:0000055;8.33e-09;65!UBERON:0002405;9.37e-09;27!UBERON:0004638;1.20e-08;18!UBERON:0001986;1.20e-08;18!UBERON:0004852;1.20e-08;18!UBERON:0002049;2.64e-07;75!UBERON:0007798;2.64e-07;75!UBERON:0000487;4.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.91e-30,8;UBERON:0004536,5.91e-30,8;UBERON:0006558,5.91e-30,8;UBERON:0010523,4.28e-29,3;UBERON:0001915,4.28e-29,3;UBERON:0001982,4.28e-29,3;UBERON:0002465,5.75e-24,10;UBERON:0004151,1.60e-13,3;UBERON:0000055,1.53e-12,68;UBERON:0002134,7.46e-11,1;UBERON:0005208,7.46e-11,1;UBERON:0005946,7.46e-11,1;UBERON:0005965,7.46e-11,1;UBERON:0002078,7.46e-11,1;UBERON:0002049,9.58e-11,78;UBERON:0007798,9.58e-11,78;UBERON:0002084,1.10e-10,1;UBERON:0002082,1.10e-10,1;UBERON:0010226,1.10e-10,1;UBERON:0004535,7.34e-09,109;UBERON:0004638,1.29e-08,18;UBERON:0001986,1.29e-08,18;UBERON:0004852,1.29e-08,18;UBERON:0001009,1.41e-08,112;UBERON:0000487,4.47e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.42306505074684,1.33888245105868,1.20848795132744,1.52054421143703,2.4406205754817,0,0,0.625098097988558,1.12264686313085,0.675668882899933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,1.73239737313289,4.1668696131895,3.04406643575357,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,9.25363516141736,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,1.43574604915363,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,2.08979093004525,2.88832816854191,4.15440338029185,0,0,0,0,0.0788057072991982,0.577000469484979,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.620916591138472,0,0,0,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,1.71603825227734,0,0,0.297046400327086,0,0.169927114687817,0.187967835959707,0.193373663920732,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0.126166424835079,0.109265571963696,0,0.509944148709909,0,0.0918948995348449,0.50141507858475,0.303114792872958,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0.202056159043763,0.430333232356058,0,0,0,0,0,0,0.977931553462932,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p11@RBPMS | |||
}} |
Revision as of 21:33, 22 January 2014
Short description: | p11@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RBPMS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520191_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | E5RJ31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 6.42e-40 | 6 |
endothelial cell of lymphatic vessel | 6.42e-40 | 6 |
vascular lymphangioblast | 6.42e-40 | 6 |
endothelial cell of vascular tree | 7.06e-31 | 24 |
capillary endothelial cell | 4.28e-29 | 3 |
endothelial cell | 4.42e-25 | 36 |
meso-epithelial cell | 8.75e-20 | 45 |
neuron | 2.85e-15 | 6 |
neuroblast | 2.85e-15 | 6 |
electrically signaling cell | 2.85e-15 | 6 |
lining cell | 4.99e-15 | 58 |
barrier cell | 4.99e-15 | 58 |
neuronal stem cell | 1.36e-11 | 8 |
blood vessel endothelial cell | 1.29e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.29e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 5.91e-30 | 8 |
lymph vasculature | 5.91e-30 | 8 |
lymphatic part of lymphoid system | 5.91e-30 | 8 |
microcirculatory vessel | 4.28e-29 | 3 |
endothelium of capillary | 4.28e-29 | 3 |
capillary | 4.28e-29 | 3 |
lymphoid system | 5.75e-24 | 10 |
cardiac chamber | 1.60e-13 | 3 |
vessel | 1.53e-12 | 68 |
tricuspid valve | 7.46e-11 | 1 |
right atrium valve | 7.46e-11 | 1 |
outflow tract of atrium | 7.46e-11 | 1 |
outflow part of right atrium | 7.46e-11 | 1 |
right cardiac atrium | 7.46e-11 | 1 |
vasculature | 9.58e-11 | 78 |
vascular system | 9.58e-11 | 78 |
heart left ventricle | 1.10e-10 | 1 |
cardiac ventricle | 1.10e-10 | 1 |
future cardiac ventricle | 1.10e-10 | 1 |
cardiovascular system | 7.34e-09 | 109 |
blood vessel endothelium | 1.29e-08 | 18 |
endothelium | 1.29e-08 | 18 |
cardiovascular system endothelium | 1.29e-08 | 18 |
circulatory system | 1.41e-08 | 112 |
simple squamous epithelium | 4.47e-07 | 22 |