FFCP PHASE1:Mm9::chr5:114453734..114453746,+: Difference between revisions
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{{FFCP|EntrezGene=13142|HGNC=|MCL_coexpression_id=30|UniProt=P18894|association_with_transcript=22bp_to_ENSMUST00000112292_5end|description=CAGE_peak_5_at_Dao_5end|id=chr5:114453734..114453746,+|ontology_enrichment_celltype=CL:0002614!3.69e-09!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!1.87e-17!6;UBERON:0002113!2.75e-12!14;UBERON:0003918!2.75e-12!14;UBERON:0005095!2.75e-12!14;UBERON:0007687!2.75e-12!14;UBERON:0002950!7.91e-12!4;UBERON:0001891!7.91e-12!4;UBERON:0009616!7.91e-12!4;UBERON:0006554!1.38e-10!16;UBERON:0000489!5.91e-10!21;UBERON:0001008!6.92e-10!17;UBERON:0002038!3.69e-09!3;UBERON:0002308!3.69e-09!3;UBERON:0009663!3.69e-09!3;UBERON:0009661!3.69e-09!3;UBERON:0006331!3.69e-09!3;UBERON:0000125!3.69e-09!3;UBERON:0004733!9.27e-09!6;UBERON:0004732!9.27e-09!6;UBERON:0002028!9.27e-09!6;UBERON:0007277!9.27e-09!6;UBERON:0001896!2.94e-07!2;UBERON:0005290!2.94e-07!2;UBERON:0010096!2.94e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.12e-33,6;UBERON:0004732,1.12e-33,6;UBERON:0002028,1.12e-33,6;UBERON:0007277,1.12e-33,6;UBERON:0003076,2.38e-26,12;UBERON:0003057,2.38e-26,12;UBERON:0001896,2.40e-25,2;UBERON:0002298,2.40e-25,2;UBERON:0005290,2.40e-25,2;UBERON:0010096,2.40e-25,2;UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78342391034641,5.44561437714983,0.255457055208591,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0.758838445491087,2.21415221969403,2.98297582898612,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Dao}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13142 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P18894 | |||
|association_with_transcript=22bp_to_ENSMUST00000112292_5end | |||
|cluster_id=chr5:114453734..114453746,+ | |||
|description=CAGE_peak_5_at_Dao_5end | |||
|id=chr5:114453734..114453746,+ | |||
|ontology_enrichment_celltype=CL:0002614!3.69e-09!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.87e-17!6;UBERON:0002113!2.75e-12!14;UBERON:0003918!2.75e-12!14;UBERON:0005095!2.75e-12!14;UBERON:0007687!2.75e-12!14;UBERON:0002950!7.91e-12!4;UBERON:0001891!7.91e-12!4;UBERON:0009616!7.91e-12!4;UBERON:0006554!1.38e-10!16;UBERON:0000489!5.91e-10!21;UBERON:0001008!6.92e-10!17;UBERON:0002038!3.69e-09!3;UBERON:0002308!3.69e-09!3;UBERON:0009663!3.69e-09!3;UBERON:0009661!3.69e-09!3;UBERON:0006331!3.69e-09!3;UBERON:0000125!3.69e-09!3;UBERON:0004733!9.27e-09!6;UBERON:0004732!9.27e-09!6;UBERON:0002028!9.27e-09!6;UBERON:0007277!9.27e-09!6;UBERON:0001896!2.94e-07!2;UBERON:0005290!2.94e-07!2;UBERON:0010096!2.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.12e-33,6;UBERON:0004732,1.12e-33,6;UBERON:0002028,1.12e-33,6;UBERON:0007277,1.12e-33,6;UBERON:0003076,2.38e-26,12;UBERON:0003057,2.38e-26,12;UBERON:0001896,2.40e-25,2;UBERON:0002298,2.40e-25,2;UBERON:0005290,2.40e-25,2;UBERON:0010096,2.40e-25,2;UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78342391034641,5.44561437714983,0.255457055208591,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0.758838445491087,2.21415221969403,2.98297582898612,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Dao | |||
}} |
Revision as of 01:50, 6 August 2015
Short description: | p5@Dao |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dao_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 22bp_to_ENSMUST00000112292_5end |
EntrezGene: | 13142 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 1.12e-33 | 6 |
segmental subdivision of nervous system | 1.12e-33 | 6 |
hindbrain | 1.12e-33 | 6 |
presumptive hindbrain | 1.12e-33 | 6 |
posterior neural tube | 2.38e-26 | 12 |
chordal neural plate | 2.38e-26 | 12 |
medulla oblongata | 2.40e-25 | 2 |
brainstem | 2.40e-25 | 2 |
myelencephalon | 2.40e-25 | 2 |
future myelencephalon | 2.40e-25 | 2 |
cerebellum | 8.72e-14 | 4 |
regional part of metencephalon | 8.72e-14 | 4 |
metencephalon | 8.72e-14 | 4 |
future metencephalon | 8.72e-14 | 4 |
rhombic lip | 8.72e-14 | 4 |