FFCP PHASE1:Mm9::chr5:5694559..5694581,-: Difference between revisions
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{{FFCP|EntrezGene=74051|HGNC=|MCL_coexpression_id=218|UniProt=Q8BWB6,B2RX33,D3YUM6|association_with_transcript=0bp_to_ENSMUST00000115426,NM_028734,uc008wiz.2,uc008wja.1_5end|description=CAGE_peak_5_at_Steap2_5end|id=chr5:5694559..5694581,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,4.58e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!7.08e-08!85;UBERON:0005172!1.99e-07!49;UBERON:0005173!1.99e-07!49;UBERON:0002417!1.99e-07!49;UBERON:0000916!1.99e-07!49;UBERON:0002100!4.28e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.58e-10,3;UBERON:0002275,4.58e-10,3;UBERON:0002113,8.38e-10,14;UBERON:0003918,8.38e-10,14;UBERON:0011143,8.38e-10,14;UBERON:0005095,8.38e-10,14;UBERON:0007687,8.38e-10,14;UBERON:0004733,6.91e-09,6;UBERON:0004732,6.91e-09,6;UBERON:0002028,6.91e-09,6;UBERON:0007277,6.91e-09,6;UBERON:0000489,3.05e-08,21;UBERON:0001896,7.99e-08,2;UBERON:0002298,7.99e-08,2;UBERON:0005290,7.99e-08,2;UBERON:0010096,7.99e-08,2;UBERON:0006554,2.04e-07,18;UBERON:0001008,5.62e-07,19;UBERON:0003104,8.94e-07,61;UBERON:0009142,8.94e-07,61|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,1.10128051297009,0,0,0,0.58328969722285,0,0,0,0,0,3.08711323243136,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0,0,0.191690942036473,0,2.20231761998777,2.17068474744819,3.07213066512487,0,0.0914876436024097,0,5.02529398202486,0.56276261003168,0.916789486660861,0.589257170947335,0.569486723196412,0.372798891650601,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,0.852151612890289,0.259786004602869,0.35333957451034,0,0,0,0,0.865964164044856,0,0.505524445014783,0.45673551887624,0,5.34391700633369,0.173485326766136,0.913396434936424,0.922461989024234,1.3565037649736,0.587943535678524,1.25666591329675,0,0,0,0,0,0,0,1.46390398505774,3.14170060220183,0.255457055208591,0,0,0,2.09706895166752,0,0,0.347648640384553,0.255715457330331,1.87009240103604,1.1356888414743,0,0,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0.134206418760372,1.05144974282064,0.205809224758569,0,0.528901133327089,0,0,0.515469845288373,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.685491075658373,1.1270773567308,2.03651327845314,0.775809948670503,1.47285221769669,1.45444035385792,2.65698266363284,3.1399745568275,4.56569506510662,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.811440485554012,0.482354319504834,0.25462585178142,0,1.29708181420028,0.549122826376163,1.43768206527355,0,0,0,0.538192240565737,0.482443521363367,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.345369963731791,0.578596234326046,0,0,1.96705709207614,0.275936746304732,7.38532713943843,6.44664276257117,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,0.329940245945071,0,0.728341908464944,0.604647113929502,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.328281799490123,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.539457385539283,0.165306911450672,0,0,0,0,0,0.165458490457098,0.583353565032143,0,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,1.07656627931371,0,0.19318959403219,2.064507229963,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p5@Steap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74051 | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BWB6,uniprot:B2RX33,uniprot:D3YUM6 | |||
|association_with_transcript=0bp_to_ENSMUST00000115426,NM_028734,uc008wiz.2,uc008wja.1_5end | |||
|cluster_id=chr5:5694559..5694581,- | |||
|description=CAGE_peak_5_at_Steap2_5end | |||
|id=chr5:5694559..5694581,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.58e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!7.08e-08!85;UBERON:0005172!1.99e-07!49;UBERON:0005173!1.99e-07!49;UBERON:0002417!1.99e-07!49;UBERON:0000916!1.99e-07!49;UBERON:0002100!4.28e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.58e-10,3;UBERON:0002275,4.58e-10,3;UBERON:0002113,8.38e-10,14;UBERON:0003918,8.38e-10,14;UBERON:0011143,8.38e-10,14;UBERON:0005095,8.38e-10,14;UBERON:0007687,8.38e-10,14;UBERON:0004733,6.91e-09,6;UBERON:0004732,6.91e-09,6;UBERON:0002028,6.91e-09,6;UBERON:0007277,6.91e-09,6;UBERON:0000489,3.05e-08,21;UBERON:0001896,7.99e-08,2;UBERON:0002298,7.99e-08,2;UBERON:0005290,7.99e-08,2;UBERON:0010096,7.99e-08,2;UBERON:0006554,2.04e-07,18;UBERON:0001008,5.62e-07,19;UBERON:0003104,8.94e-07,61;UBERON:0009142,8.94e-07,61 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,1.10128051297009,0,0,0,0.58328969722285,0,0,0,0,0,3.08711323243136,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0,0,0.191690942036473,0,2.20231761998777,2.17068474744819,3.07213066512487,0,0.0914876436024097,0,5.02529398202486,0.56276261003168,0.916789486660861,0.589257170947335,0.569486723196412,0.372798891650601,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,0.852151612890289,0.259786004602869,0.35333957451034,0,0,0,0,0.865964164044856,0,0.505524445014783,0.45673551887624,0,5.34391700633369,0.173485326766136,0.913396434936424,0.922461989024234,1.3565037649736,0.587943535678524,1.25666591329675,0,0,0,0,0,0,0,1.46390398505774,3.14170060220183,0.255457055208591,0,0,0,2.09706895166752,0,0,0.347648640384553,0.255715457330331,1.87009240103604,1.1356888414743,0,0,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0.134206418760372,1.05144974282064,0.205809224758569,0,0.528901133327089,0,0,0.515469845288373,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.685491075658373,1.1270773567308,2.03651327845314,0.775809948670503,1.47285221769669,1.45444035385792,2.65698266363284,3.1399745568275,4.56569506510662,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.811440485554012,0.482354319504834,0.25462585178142,0,1.29708181420028,0.549122826376163,1.43768206527355,0,0,0,0.538192240565737,0.482443521363367,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.345369963731791,0.578596234326046,0,0,1.96705709207614,0.275936746304732,7.38532713943843,6.44664276257117,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,0.329940245945071,0,0.728341908464944,0.604647113929502,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.328281799490123,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.539457385539283,0.165306911450672,0,0,0,0,0,0.165458490457098,0.583353565032143,0,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,1.07656627931371,0,0.19318959403219,2.064507229963,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Steap2 | |||
}} |
Revision as of 11:49, 4 August 2015
Short description: | p5@Steap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Steap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | 0bp_to_ENSMUST00000115426, NM_028734, uc008wiz.2, uc008wja.1_5end |
EntrezGene: | 74051 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.58e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.58e-10 | 3 |
reticular formation | 4.58e-10 | 3 |
kidney | 8.38e-10 | 14 |
kidney mesenchyme | 8.38e-10 | 14 |
upper urinary tract | 8.38e-10 | 14 |
kidney rudiment | 8.38e-10 | 14 |
kidney field | 8.38e-10 | 14 |
segmental subdivision of hindbrain | 6.91e-09 | 6 |
segmental subdivision of nervous system | 6.91e-09 | 6 |
hindbrain | 6.91e-09 | 6 |
presumptive hindbrain | 6.91e-09 | 6 |
cavitated compound organ | 3.05e-08 | 21 |
medulla oblongata | 7.99e-08 | 2 |
brainstem | 7.99e-08 | 2 |
myelencephalon | 7.99e-08 | 2 |
future myelencephalon | 7.99e-08 | 2 |
urinary system structure | 2.04e-07 | 18 |
renal system | 5.62e-07 | 19 |
mesenchyme | 8.94e-07 | 61 |
entire embryonic mesenchyme | 8.94e-07 | 61 |