FFCP PHASE1:Mm9::chr6:41802747..41802789,+: Difference between revisions
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{{FFCP|EntrezGene=84543|HGNC=|MCL_coexpression_id=44|UniProt=D3Z617|association_with_transcript=-198bp_to_ENSMUST00000120605_5end|description=CAGE_peak_3_at_Sval2_5end|id=chr6:41802747..41802789,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000078!4.66e-19!2;UBERON:0010147!4.66e-19!2;UBERON:0003937!4.66e-19!2;UBERON:0005399!4.66e-19!2;UBERON:0000165!4.66e-19!2;UBERON:0000166!4.66e-19!2;UBERON:0000930!4.66e-19!2;UBERON:0000161!7.42e-17!5;UBERON:0000998!1.63e-10!1;UBERON:0007194!1.63e-10!1;UBERON:0006868!1.63e-10!1;UBERON:0001044!2.01e-10!1;UBERON:0001736!2.01e-10!1;UBERON:0003293!2.01e-10!1;UBERON:0003294!2.01e-10!1;UBERON:0010047!2.01e-10!1;UBERON:0001829!2.01e-10!1;UBERON:0000167!2.01e-10!1;UBERON:0006298!2.01e-10!1;UBERON:0001723!2.48e-10!1;UBERON:0001033!2.48e-10!1;UBERON:0010056!2.48e-10!1;UBERON:0002367!3.04e-10!1;UBERON:0009846!3.04e-10!1;UBERON:0003353!3.04e-10!1;UBERON:0004902!3.04e-10!1;UBERON:0003820!3.04e-10!1;UBERON:0009847!3.04e-10!1;UBERON:0006834!6.88e-10!1;UBERON:0001444!5.99e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.74e-44,1;UBERON:0007194,2.74e-44,1;UBERON:0006868,2.74e-44,1;UBERON:0001044,7.47e-44,1;UBERON:0001736,7.47e-44,1;UBERON:0003293,7.47e-44,1;UBERON:0003294,7.47e-44,1;UBERON:0001829,7.47e-44,1;UBERON:0010047,7.47e-44,1;UBERON:0000167,7.47e-44,1;UBERON:0006298,7.47e-44,1;UBERON:0010147,5.75e-23,2;UBERON:0003937,5.75e-23,2;UBERON:0005399,5.75e-23,2;UBERON:0000165,9.50e-23,2;UBERON:0000166,9.50e-23,2;UBERON:0000930,9.50e-23,2;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0000161,5.59e-10,5;UBERON:0000058,1.41e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0.187682475451182,0,0,30.5958983461572,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Sval2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:84543 | |||
|HGNC= | |||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z617 | |||
|association_with_transcript=-198bp_to_ENSMUST00000120605_5end | |||
|cluster_id=chr6:41802747..41802789,+ | |||
|description=CAGE_peak_3_at_Sval2_5end | |||
|id=chr6:41802747..41802789,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000078!4.66e-19!2;UBERON:0010147!4.66e-19!2;UBERON:0003937!4.66e-19!2;UBERON:0005399!4.66e-19!2;UBERON:0000165!4.66e-19!2;UBERON:0000166!4.66e-19!2;UBERON:0000930!4.66e-19!2;UBERON:0000161!7.42e-17!5;UBERON:0000998!1.63e-10!1;UBERON:0007194!1.63e-10!1;UBERON:0006868!1.63e-10!1;UBERON:0001044!2.01e-10!1;UBERON:0001736!2.01e-10!1;UBERON:0003293!2.01e-10!1;UBERON:0003294!2.01e-10!1;UBERON:0010047!2.01e-10!1;UBERON:0001829!2.01e-10!1;UBERON:0000167!2.01e-10!1;UBERON:0006298!2.01e-10!1;UBERON:0001723!2.48e-10!1;UBERON:0001033!2.48e-10!1;UBERON:0010056!2.48e-10!1;UBERON:0002367!3.04e-10!1;UBERON:0009846!3.04e-10!1;UBERON:0003353!3.04e-10!1;UBERON:0004902!3.04e-10!1;UBERON:0003820!3.04e-10!1;UBERON:0009847!3.04e-10!1;UBERON:0006834!6.88e-10!1;UBERON:0001444!5.99e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.74e-44,1;UBERON:0007194,2.74e-44,1;UBERON:0006868,2.74e-44,1;UBERON:0001044,7.47e-44,1;UBERON:0001736,7.47e-44,1;UBERON:0003293,7.47e-44,1;UBERON:0003294,7.47e-44,1;UBERON:0001829,7.47e-44,1;UBERON:0010047,7.47e-44,1;UBERON:0000167,7.47e-44,1;UBERON:0006298,7.47e-44,1;UBERON:0010147,5.75e-23,2;UBERON:0003937,5.75e-23,2;UBERON:0005399,5.75e-23,2;UBERON:0000165,9.50e-23,2;UBERON:0000166,9.50e-23,2;UBERON:0000930,9.50e-23,2;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0000161,5.59e-10,5;UBERON:0000058,1.41e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0.187682475451182,0,0,30.5958983461572,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Sval2 | |||
}} |
Revision as of 18:20, 5 August 2015
Short description: | p3@Sval2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sval2_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | -198bp_to_ENSMUST00000120605_5end |
EntrezGene: | 84543 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.74e-44 | 1 |
vesicular gland | 2.74e-44 | 1 |
seminal fluid secreting gland | 2.74e-44 | 1 |
saliva-secreting gland | 7.47e-44 | 1 |
submandibular gland | 7.47e-44 | 1 |
gland of oral region | 7.47e-44 | 1 |
gland of foregut | 7.47e-44 | 1 |
major salivary gland | 7.47e-44 | 1 |
oral gland | 7.47e-44 | 1 |
oral cavity | 7.47e-44 | 1 |
submandibular gland primordium | 7.47e-44 | 1 |
male accessory sex gland | 5.75e-23 | 2 |
sex gland | 5.75e-23 | 2 |
male reproductive gland | 5.75e-23 | 2 |
mouth | 9.50e-23 | 2 |
oral opening | 9.50e-23 | 2 |
stomodeum | 9.50e-23 | 2 |
mesonephros | 3.12e-12 | 4 |
duct of male reproductive system | 3.12e-12 | 4 |
male genital duct | 3.12e-12 | 4 |
pronephros | 3.12e-12 | 4 |
internal male genitalia | 3.12e-12 | 4 |
nephrogenic cord | 3.12e-12 | 4 |
urogenital ridge | 3.12e-12 | 4 |
pronephric mesoderm | 3.12e-12 | 4 |
rostral part of nephrogenic cord | 3.12e-12 | 4 |
presumptive pronephric mesoderm | 3.12e-12 | 4 |
orifice | 5.59e-10 | 5 |
duct | 1.41e-07 | 7 |