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FFCP PHASE1:Mm9::chr7:20283555..20283610,-: Difference between revisions

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{{FFCP|EntrezGene=11816|HGNC=|MCL_coexpression_id=200|UniProt=G3UZM8|association_with_transcript=0bp_to_ENSMUST00000172808_5end|description=CAGE_peak_2_at_Apoe_5end|id=chr7:20283555..20283610,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.71e-12!25;UBERON:0002330!1.71e-12!25;UBERON:0009854!5.09e-12!23;UBERON:0009856!5.09e-12!23;UBERON:0002107!6.38e-12!22;UBERON:0007499!6.38e-12!22;UBERON:0006925!6.38e-12!22;UBERON:0009497!6.38e-12!22;UBERON:0000015!6.38e-12!22;UBERON:0002423!6.38e-12!22;UBERON:0006235!6.38e-12!22;UBERON:0008835!6.38e-12!22;UBERON:0003894!6.38e-12!22;UBERON:0004161!6.38e-12!22;UBERON:0008836!6.38e-12!22;UBERON:0004111!1.43e-11!122;UBERON:0000025!1.45e-11!114;UBERON:0004121!8.49e-09!102;UBERON:0000924!8.49e-09!102;UBERON:0006601!8.49e-09!102;UBERON:0001017!5.35e-08!73;UBERON:0005743!5.35e-08!73;UBERON:0000073!2.54e-07!75;UBERON:0001016!2.54e-07!75;UBERON:0003914!2.99e-07!47;UBERON:0005256!9.00e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.90e-14,25;UBERON:0002330,3.90e-14,25;UBERON:0009854,1.42e-13,23;UBERON:0009856,1.42e-13,23;UBERON:0002107,1.87e-13,22;UBERON:0007499,1.87e-13,22;UBERON:0006925,1.87e-13,22;UBERON:0009497,1.87e-13,22;UBERON:0000015,1.87e-13,22;UBERON:0002423,1.87e-13,22;UBERON:0006235,1.87e-13,22;UBERON:0008835,1.87e-13,22;UBERON:0003894,1.87e-13,22;UBERON:0004161,1.87e-13,22;UBERON:0008836,1.87e-13,22;UBERON:0004111,4.04e-10,122;UBERON:0000025,5.03e-10,114;UBERON:0001017,1.25e-08,73;UBERON:0004121,2.89e-08,95;UBERON:0000924,2.89e-08,95;UBERON:0006601,2.89e-08,95;UBERON:0001016,6.01e-08,75;UBERON:0005256,3.60e-07,45;UBERON:0005172,8.46e-07,49;UBERON:0005173,8.46e-07,49;UBERON:0002417,8.46e-07,49;UBERON:0000916,8.46e-07,49|phase1_expression=2.08193501236232,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0.666219523631325,0.404950534779652,6.29605690315332,0.630924330716475,1.64537320326887,2.12194825899015,2.38121212422995,0,0,1.11994695955385,1.83527424853736,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.550640256485045,23.4717403304412,5.45062890951116,6.15121311656521,5.24960727500565,2.2397827460058,4.31257693094915,0.335565212115473,0,0,1.28629718017973,0.85960031981627,3.09403255366465,0,0,0.633831403506179,3.04960078862219,4.4464739805557,148.933403210072,177.007078899488,152.042744598465,52.7296194512392,80.3016258122049,0.414758449233911,0.270011876663381,0,7.42692559449889,9.718215801871,0.122490799214954,0.0958454710182364,0,6.60695285996332,5.10749352340751,6.14426133024974,0.131886287730194,0.0914876436024097,0.52091337055676,6.42120897703176,11.8180148106653,9.16789486660861,3.83017161115768,7.11858403995515,0.745597783301202,0.151452386666368,0.302286240427142,18.2614627882057,103.250865237766,91.1161587168386,99.3053872613583,210.527559253045,165.321921338917,14.4657752735704,0,0,0,1.83096445709685,0,0,0,0,0,0,22.836775943812,3.10725460376606,2.07818994690755,0.520455980298408,0,1.84492397804847,1.20578112442098,1.52865319276416,2.13633205260448,6.42706916109372,3.61498392299779,0,0.323533699894818,0.441683036920787,0.969750506270444,1.86391761218122,1.17112318804619,0.41889341362691,1.78819938646014,0.599075622529601,1.19980546198682,1.14363204365758,1.64769703345305,2.28750301409313,0.376963056338593,1.91206752211504,2.55715457330331,3.32460871295296,2.27137768294861,0.81471491080253,1.7416975885413,2.0217820674694,1.47309299120532,0.390361328888111,0.229902104433473,0.720248519221397,0.90422890701429,0.544291993210623,0.640568601424249,0.749613796477831,2.32833033665114,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0.59710280045548,0.702213187313235,1.02939162845886,0.284163499395593,0,0.469052119962192,0.180062061461015,0.473489471170421,0.787056926989615,1.54267112887378,0,0.536546802799238,0.934122738937356,1.31647879930784,0.985004784474571,1.05389452409612,2.48539978623065,1.09775057645525,2.14730270016595,0.841159794256509,0.514523061896422,0,0,0,0,0.38660238396628,0,0.667134131534611,0.570676878337677,1.89811624617805,0.658795818896044,1.00534083520108,1.1937388322469,0.779856348476481,1.79763881730844,1.94524244887225,0.995706366271836,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.701358198903186,1.26473074248515,1.62371162777562,0.470996183524124,1.1105744752962,56.6224517736454,0.500535317148282,1.76903095601883,1.57403478669398,2.43432145666204,6.99413763282009,8.91190481234969,14.6725030099913,17.6727397184789,31.8491239298175,129.391385874619,36.8419538191818,48.6778770058715,62.8921406088308,57.5865697405338,66.5772059481447,1.84753190166605,0.189491411770485,0.325929952884052,0.848725428875941,0.938760993154008,0.335012514883631,0.952174563544055,2.53673742215138,0.157635144106191,1.10732344824387,1.43509291791738,1.80249646187312,1.726849818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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11816
|HGNC=
|MCL_coexpression_id=200
|TSSclassifier=NA
|UniProt=uniprot:G3UZM8
|association_with_transcript=0bp_to_ENSMUST00000172808_5end
|cluster_id=chr7:20283555..20283610,-
|description=CAGE_peak_2_at_Apoe_5end
|id=chr7:20283555..20283610,-
|ontology_enrichment_celltype=
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|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.90e-14,25;UBERON:0002330,3.90e-14,25;UBERON:0009854,1.42e-13,23;UBERON:0009856,1.42e-13,23;UBERON:0002107,1.87e-13,22;UBERON:0007499,1.87e-13,22;UBERON:0006925,1.87e-13,22;UBERON:0009497,1.87e-13,22;UBERON:0000015,1.87e-13,22;UBERON:0002423,1.87e-13,22;UBERON:0006235,1.87e-13,22;UBERON:0008835,1.87e-13,22;UBERON:0003894,1.87e-13,22;UBERON:0004161,1.87e-13,22;UBERON:0008836,1.87e-13,22;UBERON:0004111,4.04e-10,122;UBERON:0000025,5.03e-10,114;UBERON:0001017,1.25e-08,73;UBERON:0004121,2.89e-08,95;UBERON:0000924,2.89e-08,95;UBERON:0006601,2.89e-08,95;UBERON:0001016,6.01e-08,75;UBERON:0005256,3.60e-07,45;UBERON:0005172,8.46e-07,49;UBERON:0005173,8.46e-07,49;UBERON:0002417,8.46e-07,49;UBERON:0000916,8.46e-07,49
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0.666219523631325,0.404950534779652,6.29605690315332,0.630924330716475,1.64537320326887,2.12194825899015,2.38121212422995,0,0,1.11994695955385,1.83527424853736,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.550640256485045,23.4717403304412,5.45062890951116,6.15121311656521,5.24960727500565,2.2397827460058,4.31257693094915,0.335565212115473,0,0,1.28629718017973,0.85960031981627,3.09403255366465,0,0,0.633831403506179,3.04960078862219,4.4464739805557,148.933403210072,177.007078899488,152.042744598465,52.7296194512392,80.3016258122049,0.414758449233911,0.270011876663381,0,7.42692559449889,9.718215801871,0.122490799214954,0.0958454710182364,0,6.60695285996332,5.10749352340751,6.14426133024974,0.131886287730194,0.0914876436024097,0.52091337055676,6.42120897703176,11.8180148106653,9.16789486660861,3.83017161115768,7.11858403995515,0.745597783301202,0.151452386666368,0.302286240427142,18.2614627882057,103.250865237766,91.1161587168386,99.3053872613583,210.527559253045,165.321921338917,14.4657752735704,0,0,0,1.83096445709685,0,0,0,0,0,0,22.836775943812,3.10725460376606,2.07818994690755,0.520455980298408,0,1.84492397804847,1.20578112442098,1.52865319276416,2.13633205260448,6.42706916109372,3.61498392299779,0,0.323533699894818,0.441683036920787,0.969750506270444,1.86391761218122,1.17112318804619,0.41889341362691,1.78819938646014,0.599075622529601,1.19980546198682,1.14363204365758,1.64769703345305,2.28750301409313,0.376963056338593,1.91206752211504,2.55715457330331,3.32460871295296,2.27137768294861,0.81471491080253,1.7416975885413,2.0217820674694,1.47309299120532,0.390361328888111,0.229902104433473,0.720248519221397,0.90422890701429,0.544291993210623,0.640568601424249,0.749613796477831,2.32833033665114,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0.59710280045548,0.702213187313235,1.02939162845886,0.284163499395593,0,0.469052119962192,0.180062061461015,0.473489471170421,0.787056926989615,1.54267112887378,0,0.536546802799238,0.934122738937356,1.31647879930784,0.985004784474571,1.05389452409612,2.48539978623065,1.09775057645525,2.14730270016595,0.841159794256509,0.514523061896422,0,0,0,0,0.38660238396628,0,0.667134131534611,0.570676878337677,1.89811624617805,0.658795818896044,1.00534083520108,1.1937388322469,0.779856348476481,1.79763881730844,1.94524244887225,0.995706366271836,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.701358198903186,1.26473074248515,1.62371162777562,0.470996183524124,1.1105744752962,56.6224517736454,0.500535317148282,1.76903095601883,1.57403478669398,2.43432145666204,6.99413763282009,8.91190481234969,14.6725030099913,17.6727397184789,31.8491239298175,129.391385874619,36.8419538191818,48.6778770058715,62.8921406088308,57.5865697405338,66.5772059481447,1.84753190166605,0.189491411770485,0.325929952884052,0.848725428875941,0.938760993154008,0.335012514883631,0.952174563544055,2.53673742215138,0.157635144106191,1.10732344824387,1.43509291791738,1.80249646187312,1.72684981865896,1.59113964439663,18.0949540727127,3.26343410291226,2.95058563811422,1.93155722413313,2.88991061978026,2.57865710502847,0,1.00988370881749,0.315508219416257,1.17131623288992,1.93881057959519,2.86762557543062,2.45078541490634,3.39691836946599,3.23848561339915,2.33804686329049,1.58115111178609,3.53453448063988,1.56134093729095,1.06839362200353,0.488660878060728,1.48473110675282,1.32745138339963,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0,0.727067458955011,1.78248689192361,1.58018378967908,0,1.03135543248187,1.02131881726136,0,0.646793418913773,0.643011105094777,0.532020700926821,1.42695054081656,1.31639216481697,0.608929898229199,0.469343416127421,0.847328283455281,1.10264199027481,6.26567761177624,1.29171541356724,1.20625849856312,2.02932984805332,3.28281799490123,0.291480836629851,3.8939313422207,1.36696704638282,1.857481811669,1.11116716421827,0.753473828018764,0.546776910884101,1.83022538565218,0,0,0.138199973804424,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0.436725127492355,0.809186078308924,2.56225712748541,0.523511883968059,0.518459893167171,1.86401793926078,1.12738587736838,0.448549638131936,0.496375471371293,1.36115831840833,0.387479470433193,0.337912250981556,0.352071715937262,1.43224823328345,0.419437377702843,0,0.288030006257865,0.948033361884535,0.608175645870493,0.205421914329655,0.129920822977795,0,0.993406773906324,0.480781798079875,0.295379054349154,0.302899349844443,0.228620419965,0.100826185136841,0.584747284438515,0.962118416403295,1.05189211963412,0.453460767230423,0,0,0,2.12508553435409,0.563047426353546,0.183151624267265,0.428736758158132,0,6.21227026878773,5.52390283808612,6.30185064783336,3.60891682921744,6.16574267793578,8.3093328712867,6.75022500231806,5.40385443869065,5.89085131679466,6.21312374102184,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.367687016900028,0.888986911206461,2.47242068686673,0.320919209591815,1.01078884705519,1.77435509923168,1.13175804831646,2.34103768674706,1.34452820050225,1.43588672389033,1.90517476513229,1.0429589335037,1.35036454324594,0.824171801606613,1.03039244094078,2.40008476669791,2.48466128623072,0.715308569841963,1.0174249164263,1.12931256498397,1.52306294205018,0.73171189149109,1.8414879800649,1.7654534799962,1.12228454331548,1.30498519936592,1.87158516513571,0.409231043169689,1.39443157067369,0.964533054905707,0.499621155875892,2.10538447600868,2.36358159453128,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p2@Apoe
}}

Revision as of 18:30, 4 August 2015

Short description:p2@Apoe
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Apoe_5end
Coexpression cluster:MCL_coexpression_mm9:200
Association with transcript: 0bp_to_ENSMUST00000172808_5end
EntrezGene:11816
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Apoe

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7148.93
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7177.01
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2152.04
Mouse Microglia, donor1.CNhs12629.11718-123C852.73
Mouse Microglia, donor2.CNhs12634.11736-123E880.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7103.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C491.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C899.31
Mouse hepatocyte, donor6.CNhs13090.11822-124F4210.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F6165.32
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.84
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B256.62
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A38.91
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F417.67
liver, neonate N03.CNhs11123.1345-25G231.85
liver, neonate N06.CNhs11101.684-20A8129.39
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B948.68
liver, neonate N20.CNhs11220.823-25A362.89
liver, neonate N25.CNhs11198.1368-26H157.59
liver, neonate N30.CNhs11106.1382-42D166.58
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland3.90e-1425
exocrine system3.90e-1425
digestive tract diverticulum1.42e-1323
sac1.42e-1323
liver1.87e-1322
epithelial sac1.87e-1322
digestive gland1.87e-1322
epithelium of foregut-midgut junction1.87e-1322
anatomical boundary1.87e-1322
hepatobiliary system1.87e-1322
foregut-midgut junction1.87e-1322
hepatic diverticulum1.87e-1322
liver primordium1.87e-1322
septum transversum1.87e-1322
liver bud1.87e-1322
anatomical conduit4.04e-10122
tube5.03e-10114
central nervous system1.25e-0873
ectoderm-derived structure2.89e-0895
ectoderm2.89e-0895
presumptive ectoderm2.89e-0895
nervous system6.01e-0875
trunk mesenchyme3.60e-0745
abdomen element8.46e-0749
abdominal segment element8.46e-0749
abdominal segment of trunk8.46e-0749
abdomen8.46e-0749
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