FFCP PHASE1:Mm9::chr7:75483223..75483226,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3635|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:75483223..75483226,+|id=chr7:75483223..75483226,+|ontology_enrichment_celltype=CL:0000791!1.90e-14!9;CL:0000789!1.90e-14!9;CL:0002420!1.90e-14!9;CL:0002419!1.90e-14!9;CL:0000790!1.90e-14!9;CL:0000624!5.10e-13!8;CL:0000838!1.36e-12!12;CL:0000084!1.81e-11!11;CL:0000827!1.81e-11!11;CL:0000542!1.87e-11!13;CL:0000051!1.87e-11!13;CL:0000893!1.44e-09!6;CL:0002489!1.44e-09!6;CL:0000898!1.44e-09!6;CL:0000809!1.44e-09!6;CL:0000810!1.44e-09!6;CL:0000895!1.44e-09!6;CL:0000808!1.44e-09!6;CL:0000894!1.44e-09!6;CL:0000806!1.44e-09!6;CL:0000807!1.44e-09!6;CL:0000805!1.44e-09!6;CL:0002425!1.44e-09!6;CL:0002436!1.44e-09!6;CL:0002427!1.44e-09!6;CL:0002428!1.44e-09!6;CL:0002429!1.44e-09!6;CL:0002433!1.44e-09!6;CL:0002431!1.44e-09!6;CL:0002432!1.44e-09!6;CL:0000738!3.01e-08!17;CL:0002087!3.01e-08!17;CL:0002031!2.56e-07!25|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.31e-28!29;UBERON:0002370!4.76e-28!23;UBERON:0000974!4.76e-28!23;UBERON:0004807!4.76e-28!23;UBERON:0005058!4.76e-28!23;UBERON:0003351!4.76e-28!23;UBERON:0009113!4.76e-28!23;UBERON:0003295!4.76e-28!23;UBERON:0009722!4.76e-28!23;UBERON:0005562!4.76e-28!23;UBERON:0007690!4.76e-28!23;UBERON:0006562!1.23e-26!24;UBERON:0003408!1.23e-26!24;UBERON:0001557!1.23e-26!24;UBERON:0001042!1.23e-26!24;UBERON:0008814!1.23e-26!24;UBERON:0009145!1.23e-26!24;UBERON:0000072!4.95e-23!27;UBERON:0005057!4.97e-20!51;UBERON:0002390!2.80e-19!45;UBERON:0003061!2.80e-19!45;UBERON:0002193!3.75e-19!48;UBERON:0000065!9.63e-18!41;UBERON:0001004!3.62e-17!42;UBERON:0000063!1.83e-16!35;UBERON:0002405!3.57e-16!70;UBERON:0003929!1.11e-13!55;UBERON:0002368!2.97e-13!60;UBERON:0005911!1.35e-12!69;UBERON:0002530!1.03e-11!65;UBERON:0000490!2.57e-10!66;UBERON:0001041!2.74e-10!92;UBERON:0000077!3.34e-10!97;UBERON:0000949!6.32e-10!72;UBERON:0001007!1.55e-08!128;UBERON:0001555!1.55e-08!128;UBERON:0007026!1.55e-08!128;UBERON:0004119!2.84e-08!130;UBERON:0000925!2.84e-08!130;UBERON:0006595!2.84e-08!130;UBERON:0004921!4.02e-08!126;UBERON:0004185!4.02e-08!126;UBERON:0003081!2.27e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.32e-10,23;UBERON:0000974,1.32e-10,23;UBERON:0004807,1.32e-10,23;UBERON:0005058,1.32e-10,23;UBERON:0003351,1.32e-10,23;UBERON:0009113,1.32e-10,23;UBERON:0003295,1.32e-10,23;UBERON:0009722,1.32e-10,23;UBERON:0005562,1.32e-10,23;UBERON:0007690,1.32e-10,23;UBERON:0006562,3.46e-10,24;UBERON:0003408,3.46e-10,24;UBERON:0001557,3.46e-10,24;UBERON:0001042,3.46e-10,24;UBERON:0008814,3.46e-10,24;UBERON:0009145,3.46e-10,24;UBERON:0000072,4.09e-09,27;UBERON:0004177,1.61e-08,29;UBERON:0005057,1.61e-08,29;UBERON:0000077,3.85e-07,35;UBERON:0003929,5.04e-07,55;UBERON:0007811,5.91e-07,36|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,0.234064526321993,0.171217968225505,0.159544317990673,0.513602189793617,0.611942816932982,0,0,0,0.157731082679119,0.685572168028694,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0.549122826376163,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0.202725215290164,0.821687657318618,1.42912905275575,0.537080087002444,0.39736270956253,1.80293174279953,0.295379054349154,0.605798699688886,0.685861259894999,0.806609481094724,1.16949456887703,0.865906574762965,0.701261413089414,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:75483223..75483226,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3635 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:75483223..75483226,+ | |||
|description=CAGE_peak_at_chr7:75483223..75483226,+ | |||
|id=chr7:75483223..75483226,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.90e-14!9;CL:0000789!1.90e-14!9;CL:0002420!1.90e-14!9;CL:0002419!1.90e-14!9;CL:0000790!1.90e-14!9;CL:0000624!5.10e-13!8;CL:0000838!1.36e-12!12;CL:0000084!1.81e-11!11;CL:0000827!1.81e-11!11;CL:0000542!1.87e-11!13;CL:0000051!1.87e-11!13;CL:0000893!1.44e-09!6;CL:0002489!1.44e-09!6;CL:0000898!1.44e-09!6;CL:0000809!1.44e-09!6;CL:0000810!1.44e-09!6;CL:0000895!1.44e-09!6;CL:0000808!1.44e-09!6;CL:0000894!1.44e-09!6;CL:0000806!1.44e-09!6;CL:0000807!1.44e-09!6;CL:0000805!1.44e-09!6;CL:0002425!1.44e-09!6;CL:0002436!1.44e-09!6;CL:0002427!1.44e-09!6;CL:0002428!1.44e-09!6;CL:0002429!1.44e-09!6;CL:0002433!1.44e-09!6;CL:0002431!1.44e-09!6;CL:0002432!1.44e-09!6;CL:0000738!3.01e-08!17;CL:0002087!3.01e-08!17;CL:0002031!2.56e-07!25 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.31e-28!29;UBERON:0002370!4.76e-28!23;UBERON:0000974!4.76e-28!23;UBERON:0004807!4.76e-28!23;UBERON:0005058!4.76e-28!23;UBERON:0003351!4.76e-28!23;UBERON:0009113!4.76e-28!23;UBERON:0003295!4.76e-28!23;UBERON:0009722!4.76e-28!23;UBERON:0005562!4.76e-28!23;UBERON:0007690!4.76e-28!23;UBERON:0006562!1.23e-26!24;UBERON:0003408!1.23e-26!24;UBERON:0001557!1.23e-26!24;UBERON:0001042!1.23e-26!24;UBERON:0008814!1.23e-26!24;UBERON:0009145!1.23e-26!24;UBERON:0000072!4.95e-23!27;UBERON:0005057!4.97e-20!51;UBERON:0002390!2.80e-19!45;UBERON:0003061!2.80e-19!45;UBERON:0002193!3.75e-19!48;UBERON:0000065!9.63e-18!41;UBERON:0001004!3.62e-17!42;UBERON:0000063!1.83e-16!35;UBERON:0002405!3.57e-16!70;UBERON:0003929!1.11e-13!55;UBERON:0002368!2.97e-13!60;UBERON:0005911!1.35e-12!69;UBERON:0002530!1.03e-11!65;UBERON:0000490!2.57e-10!66;UBERON:0001041!2.74e-10!92;UBERON:0000077!3.34e-10!97;UBERON:0000949!6.32e-10!72;UBERON:0001007!1.55e-08!128;UBERON:0001555!1.55e-08!128;UBERON:0007026!1.55e-08!128;UBERON:0004119!2.84e-08!130;UBERON:0000925!2.84e-08!130;UBERON:0006595!2.84e-08!130;UBERON:0004921!4.02e-08!126;UBERON:0004185!4.02e-08!126;UBERON:0003081!2.27e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.32e-10,23;UBERON:0000974,1.32e-10,23;UBERON:0004807,1.32e-10,23;UBERON:0005058,1.32e-10,23;UBERON:0003351,1.32e-10,23;UBERON:0009113,1.32e-10,23;UBERON:0003295,1.32e-10,23;UBERON:0009722,1.32e-10,23;UBERON:0005562,1.32e-10,23;UBERON:0007690,1.32e-10,23;UBERON:0006562,3.46e-10,24;UBERON:0003408,3.46e-10,24;UBERON:0001557,3.46e-10,24;UBERON:0001042,3.46e-10,24;UBERON:0008814,3.46e-10,24;UBERON:0009145,3.46e-10,24;UBERON:0000072,4.09e-09,27;UBERON:0004177,1.61e-08,29;UBERON:0005057,1.61e-08,29;UBERON:0000077,3.85e-07,35;UBERON:0003929,5.04e-07,55;UBERON:0007811,5.91e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,0.234064526321993,0.171217968225505,0.159544317990673,0.513602189793617,0.611942816932982,0,0,0,0.157731082679119,0.685572168028694,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0.549122826376163,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0.202725215290164,0.821687657318618,1.42912905275575,0.537080087002444,0.39736270956253,1.80293174279953,0.295379054349154,0.605798699688886,0.685861259894999,0.806609481094724,1.16949456887703,0.865906574762965,0.701261413089414,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:75483223..75483226,+ | |||
}} |
Latest revision as of 13:11, 5 August 2015
Short description: | p@chr7:75483223..75483226, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:75483223..75483226, + |
Coexpression cluster: | MCL_coexpression_mm9:3635 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.32e-10 | 23 |
neck | 1.32e-10 | 23 |
respiratory system epithelium | 1.32e-10 | 23 |
hemolymphoid system gland | 1.32e-10 | 23 |
pharyngeal epithelium | 1.32e-10 | 23 |
thymic region | 1.32e-10 | 23 |
pharyngeal gland | 1.32e-10 | 23 |
entire pharyngeal arch endoderm | 1.32e-10 | 23 |
thymus primordium | 1.32e-10 | 23 |
early pharyngeal endoderm | 1.32e-10 | 23 |
pharynx | 3.46e-10 | 24 |
gland of gut | 3.46e-10 | 24 |
upper respiratory tract | 3.46e-10 | 24 |
chordate pharynx | 3.46e-10 | 24 |
pharyngeal arch system | 3.46e-10 | 24 |
pharyngeal region of foregut | 3.46e-10 | 24 |
segment of respiratory tract | 4.09e-09 | 27 |
hemopoietic organ | 1.61e-08 | 29 |
immune organ | 1.61e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.85e-07 | 35 |
gut epithelium | 5.04e-07 | 55 |
craniocervical region | 5.91e-07 | 36 |