FFCP PHASE1:Hg19::chr11:106266838..106266843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:106266838..106266843,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr11:106266838..106266843,+ | |description=CAGE_peak_at_chr11:106266838..106266843,+ | ||
Latest revision as of 17:45, 23 July 2015
| Short description: | p@chr11:106266838..106266843, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr11:106266838..106266843, + |
| Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr11:106266838..106266843+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pneumocyte | 4.27e-34 | 3 |
| epithelial cell of tracheobronchial tree | 2.19e-12 | 9 |
| epithelial cell of lower respiratory tract | 2.19e-12 | 9 |
| respiratory epithelial cell | 5.28e-09 | 13 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| bronchoalveolar duct junction | 2.74e-50 | 2 |
| alveolar duct | 2.74e-50 | 2 |
| bronchiole | 2.74e-50 | 2 |
| pulmonary alveolus epithelium | 4.27e-34 | 3 |
| alveolus | 4.27e-34 | 3 |
| pulmonary lobule | 4.27e-34 | 3 |
| lobule | 4.27e-34 | 3 |
| alveolus of lung | 4.27e-34 | 3 |
| alveolar system | 4.27e-34 | 3 |
| pulmonary acinus | 4.27e-34 | 3 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| lung adenocarcinoma | 2.74e-50 | 2 |
| non-small cell lung carcinoma | 4.21e-21 | 5 |
| bronchus cancer | 1.65e-15 | 7 |
| bronchogenic carcinoma | 1.65e-15 | 7 |
| lung carcinoma | 2.19e-12 | 9 |
| lung cancer | 5.55e-08 | 15 |
| respiratory system cancer | 1.45e-07 | 16 |
Showing 1 to 7 of 7 entries
