FFCP PHASE2:Hg19::chr2:176973275..176973300,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3236 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5133 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5133 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 08:52, 18 September 2015
| Short description: | p4@HOXD10 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_HOXD10_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -217bp_to_ENST00000490088_5end |
| EntrezGene: | HOXD10 |
| HGNC: | 5133 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@HOXD10 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesangial cell | 1.23e-16 | 2 |
| kidney interstitial cell | 1.23e-16 | 2 |
| juxtaglomerular complex cell | 1.23e-16 | 2 |
| renal interstitial pericyte | 1.23e-16 | 2 |
| extraglomerular mesangial cell | 1.23e-16 | 2 |
| glomerular cell | 1.23e-10 | 7 |
| kidney corpuscule cell | 1.23e-10 | 7 |
| lung fibroblast | 7.98e-10 | 1 |
| pericyte cell | 8.89e-09 | 4 |
| amnion mesenchymal stem cell | 2.07e-07 | 5 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| abdomen connective tissue | 1.23e-16 | 2 |
| abdominal segment connective tissue | 1.23e-16 | 2 |
| trunk connective tissue | 1.23e-16 | 2 |
| interstitial tissue | 1.23e-16 | 2 |
| extraglomerular mesangium | 1.23e-16 | 2 |
| kidney interstitium | 1.23e-16 | 2 |
| juxtaglomerular apparatus | 1.23e-16 | 2 |
| mesangium | 1.23e-16 | 2 |
| primitive nephron | 1.23e-10 | 7 |
| renal glomerulus | 1.23e-10 | 7 |
Showing 1 to 10 of 41 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 2.22e-13 | 10 |
| cell type benign neoplasm | 1.51e-11 | 3 |
| leiomyoma | 1.51e-11 | 3 |
| benign neoplasm | 7.00e-09 | 4 |
Showing 1 to 4 of 4 entries
