FFCP PHASE2:Hg19::chrX:19688507..19688554,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:30011 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13867 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13867 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B7Z6E8 | ||
|association_with_transcript=-27bp_to_ENST00000541422,uc011mje.1_5end | |association_with_transcript=-27bp_to_ENST00000541422,uc011mje.1_5end | ||
|cluster_id=chrX:19688507..19688554,- | |cluster_id=chrX:19688507..19688554,- |
Latest revision as of 07:53, 20 September 2015
Short description: | p7@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SH3KBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000541422, uc011mje.1_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | B7Z6E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@SH3KBP1 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.19e-14 | 76 |
fibroblast of dermis | 4.77e-12 | 6 |
fibroblast of gingiva | 4.12e-10 | 5 |
mesenchymal stem cell of adipose | 5.79e-10 | 8 |
skin fibroblast | 2.04e-09 | 23 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
surface structure | 2.14e-16 | 99 |
adipose tissue | 7.92e-11 | 14 |
dermis | 2.15e-10 | 9 |
dermatome | 2.15e-10 | 9 |
future dermis | 2.15e-10 | 9 |
integument | 1.42e-08 | 46 |
integumental system | 1.42e-08 | 46 |
skin of body | 9.29e-08 | 41 |
dense mesenchyme tissue | 7.53e-07 | 73 |
Showing 1 to 9 of 9 entries