FFCP PHASE1:Mm9::chrX:108008153..108008162,-: Difference between revisions
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|id=chrX:108008153..108008162,- | |id=chrX:108008153..108008162,- | ||
|ontology_enrichment_celltype=CL:0000117!6.86e-12!23;CL:0000337!6.86e-12!23;CL:0000540!4.58e-08!33;CL:0000047!4.58e-08!33;CL:0000031!4.58e-08!33;CL:0000404!4.58e-08!33 | |ontology_enrichment_celltype=CL:0000117!6.86e-12!23;CL:0000337!6.86e-12!23;CL:0000540!4.58e-08!33;CL:0000047!4.58e-08!33;CL:0000031!4.58e-08!33;CL:0000404!4.58e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.50e-13,3;CL:0002609,2.72e-11,6;CL:0000117,4.72e-08,23;CL:0000337,4.72e-08,23;CL:0000540,4.75e-07,33;CL:0000047,4.75e-07,33;CL:0000031,4.75e-07,33;CL:0000404,4.75e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.04e-19!34;UBERON:0001049!1.59e-18!52;UBERON:0005068!1.59e-18!52;UBERON:0006241!1.59e-18!52;UBERON:0007135!1.59e-18!52;UBERON:0002791!4.97e-18!29;UBERON:0003528!4.97e-18!29;UBERON:0001893!4.97e-18!29;UBERON:0001017!9.80e-18!73;UBERON:0005743!9.80e-18!73;UBERON:0000073!6.19e-17!75;UBERON:0001016!6.19e-17!75;UBERON:0000955!8.86e-17!50;UBERON:0006238!8.86e-17!50;UBERON:0003080!2.00e-16!40;UBERON:0002616!4.27e-16!49;UBERON:0002780!1.62e-15!39;UBERON:0001890!1.62e-15!39;UBERON:0006240!1.62e-15!39;UBERON:0000033!2.23e-14!63;UBERON:0003056!8.00e-14!49;UBERON:0002346!1.87e-12!71;UBERON:0003075!1.87e-12!71;UBERON:0007284!1.87e-12!71;UBERON:0000956!4.50e-12!21;UBERON:0001869!4.50e-12!21;UBERON:0000203!4.50e-12!21;UBERON:0004121!2.70e-11!102;UBERON:0000924!2.70e-11!102;UBERON:0006601!2.70e-11!102;UBERON:0002619!3.09e-10!17;UBERON:0007811!6.31e-08!86;UBERON:0002420!2.79e-07!8;UBERON:0007245!2.79e-07!8;UBERON:0010009!2.79e-07!8;UBERON:0010011!2.79e-07!8;UBERON:0000454!2.79e-07!8;UBERON:0002021!3.04e-07!10;UBERON:0000411!3.04e-07!10;UBERON:0001950!3.04e-07!10;UBERON:0000369!3.48e-07!5;UBERON:0002435!3.48e-07!5;UBERON:0000204!3.48e-07!5;UBERON:0010082!3.48e-07!5 | |ontology_enrichment_uberon=UBERON:0002020!8.04e-19!34;UBERON:0001049!1.59e-18!52;UBERON:0005068!1.59e-18!52;UBERON:0006241!1.59e-18!52;UBERON:0007135!1.59e-18!52;UBERON:0002791!4.97e-18!29;UBERON:0003528!4.97e-18!29;UBERON:0001893!4.97e-18!29;UBERON:0001017!9.80e-18!73;UBERON:0005743!9.80e-18!73;UBERON:0000073!6.19e-17!75;UBERON:0001016!6.19e-17!75;UBERON:0000955!8.86e-17!50;UBERON:0006238!8.86e-17!50;UBERON:0003080!2.00e-16!40;UBERON:0002616!4.27e-16!49;UBERON:0002780!1.62e-15!39;UBERON:0001890!1.62e-15!39;UBERON:0006240!1.62e-15!39;UBERON:0000033!2.23e-14!63;UBERON:0003056!8.00e-14!49;UBERON:0002346!1.87e-12!71;UBERON:0003075!1.87e-12!71;UBERON:0007284!1.87e-12!71;UBERON:0000956!4.50e-12!21;UBERON:0001869!4.50e-12!21;UBERON:0000203!4.50e-12!21;UBERON:0004121!2.70e-11!102;UBERON:0000924!2.70e-11!102;UBERON:0006601!2.70e-11!102;UBERON:0002619!3.09e-10!17;UBERON:0007811!6.31e-08!86;UBERON:0002420!2.79e-07!8;UBERON:0007245!2.79e-07!8;UBERON:0010009!2.79e-07!8;UBERON:0010011!2.79e-07!8;UBERON:0000454!2.79e-07!8;UBERON:0002021!3.04e-07!10;UBERON:0000411!3.04e-07!10;UBERON:0001950!3.04e-07!10;UBERON:0000369!3.48e-07!5;UBERON:0002435!3.48e-07!5;UBERON:0000204!3.48e-07!5;UBERON:0010082!3.48e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.00e-10,29;UBERON:0002791,3.00e-10,29;UBERON:0001893,3.00e-10,29;UBERON:0002780,6.16e-09,39;UBERON:0001890,6.16e-09,39;UBERON:0006240,6.16e-09,39;UBERON:0003080,1.13e-08,40;UBERON:0002020,1.53e-08,34;UBERON:0000369,4.05e-08,5;UBERON:0002435,4.05e-08,5;UBERON:0000204,4.05e-08,5;UBERON:0010082,4.05e-08,5;UBERON:0001017,2.21e-07,73;UBERON:0002616,2.47e-07,46;UBERON:0000955,3.83e-07,47;UBERON:0006238,3.83e-07,47;UBERON:0001016,4.00e-07,75;UBERON:0003056,8.69e-07,49 | |||
|phase1_expression=9.44878197918284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,1.82084814773638,3.70293685490423,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.405017814995072,0,0.571301968807607,0,2.08234358665422,2.77951865952885,1.83843757322004,0,0.127687338085188,0,0.791317726381163,1.18933936683133,0.52091337055676,0.279182999001381,0,0.45839474333043,0,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,3.20250421973039,3.76963056338593,0.695297280769106,1.27857728665165,1.0389402227978,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,1.3492355185943,1.19707462020309,1.19513524027894,1.45864030240976,0,0,0.44449345560323,1.44224540067226,0.320919209591815,0.758091635291392,0.25347929989024,1.32038438970253,0.561849044819294,0.89635213366817,0.574354689556133,0.952587382566147,0.579421629724277,0.192909220463705,1.23625770240992,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.872078499793971,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0,1.49886346762768,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=9.44878197918284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,1.82084814773638,3.70293685490423,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.405017814995072,0,0.571301968807607,0,2.08234358665422,2.77951865952885,1.83843757322004,0,0.127687338085188,0,0.791317726381163,1.18933936683133,0.52091337055676,0.279182999001381,0,0.45839474333043,0,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,3.20250421973039,3.76963056338593,0.695297280769106,1.27857728665165,1.0389402227978,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,1.3492355185943,1.19707462020309,1.19513524027894,1.45864030240976,0,0,0.44449345560323,1.44224540067226,0.320919209591815,0.758091635291392,0.25347929989024,1.32038438970253,0.561849044819294,0.89635213366817,0.574354689556133,0.952587382566147,0.579421629724277,0.192909220463705,1.23625770240992,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.872078499793971,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0,1.49886346762768,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p@chrX:108008153..108008162,- | |short_description=p@chrX:108008153..108008162,- | ||
}} | }} |
Revision as of 12:31, 14 November 2012
Short description: | p@chrX:108008153..108008162, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:108008153..108008162, - |
Coexpression cluster: | MCL_coexpression_mm9:1857 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.50e-13 | 3 |
neuron of cerebral cortex | 2.72e-11 | 6 |
CNS neuron (sensu Vertebrata) | 4.72e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.72e-08 | 23 |
neuron | 4.75e-07 | 33 |
neuronal stem cell | 4.75e-07 | 33 |
neuroblast | 4.75e-07 | 33 |
electrically signaling cell | 4.75e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 3.00e-10 | 29 |
regional part of telencephalon | 3.00e-10 | 29 |
telencephalon | 3.00e-10 | 29 |
regional part of forebrain | 6.16e-09 | 39 |
forebrain | 6.16e-09 | 39 |
future forebrain | 6.16e-09 | 39 |
anterior neural tube | 1.13e-08 | 40 |
gray matter | 1.53e-08 | 34 |
corpus striatum | 4.05e-08 | 5 |
striatum | 4.05e-08 | 5 |
ventral part of telencephalon | 4.05e-08 | 5 |
future corpus striatum | 4.05e-08 | 5 |
central nervous system | 2.21e-07 | 73 |
regional part of brain | 2.47e-07 | 46 |
brain | 3.83e-07 | 47 |
future brain | 3.83e-07 | 47 |
nervous system | 4.00e-07 | 75 |
pre-chordal neural plate | 8.69e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.