FFCP PHASE1:Hg19::chr1:153113974..153113991,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002166!1.26e-22!3;CL:0002076!4.18e-12!43;CL:0002621!1.05e-10!3;CL:0000068!1.70e-10!3;CL:0000069!1.70e-10!3;CL:0000307!1.70e-10!3;CL:0000377!1.70e-10!3;CL:0000223!1.93e-10!59;CL:0002368!5.56e-09!13;CL:0002251!1.97e-08!21;CL:0002336!3.28e-08!1;CL:0002261!3.28e-08!1;CL:0002170!3.28e-08!1;CL:1001319!3.79e-08!1;CL:1000600!3.79e-08!1;CL:0002202!9.58e-08!9;CL:0002632!9.58e-08!9 | |ontology_enrichment_celltype=CL:0002166!1.26e-22!3;CL:0002076!4.18e-12!43;CL:0002621!1.05e-10!3;CL:0000068!1.70e-10!3;CL:0000069!1.70e-10!3;CL:0000307!1.70e-10!3;CL:0000377!1.70e-10!3;CL:0000223!1.93e-10!59;CL:0002368!5.56e-09!13;CL:0002251!1.97e-08!21;CL:0002336!3.28e-08!1;CL:0002261!3.28e-08!1;CL:0002170!3.28e-08!1;CL:1001319!3.79e-08!1;CL:1000600!3.79e-08!1;CL:0002202!9.58e-08!9;CL:0002632!9.58e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.56e-27;3!CL:0000307;6.78e-08;3!CL:0002621;6.78e-08;3!CL:0002623;6.78e-08;3 | |ontology_enrichment_celltype_v019=CL:0002166;3.56e-27;3!CL:0000307;6.78e-08;3!CL:0002621;6.78e-08;3!CL:0002623;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,4.07e-27,3;CL:0002621,5.54e-08,3;CL:0002623,6.34e-08,3;CL:0000068,7.26e-08,3;CL:0000069,7.26e-08,3;CL:0000307,7.26e-08,3;CL:0000377,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.30e-21;1!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!CL:0000377;6.78e-08;3 | |ontology_enrichment_development_v019=UBERON:0009143;2.30e-21;1!UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!CL:0000377;6.78e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!4.02e-17!4;UBERON:0001704!4.02e-17!4;UBERON:0000166!2.33e-16!21;UBERON:0000165!1.50e-15!28;UBERON:0000930!1.50e-15!28;UBERON:0001004!2.52e-12!72;UBERON:0000161!3.33e-12!35;UBERON:0002090!1.35e-11!6;UBERON:0004119!1.43e-11!169;UBERON:0000925!1.43e-11!169;UBERON:0006595!1.43e-11!169;UBERON:0001723!8.26e-11!3;UBERON:0001033!8.26e-11!3;UBERON:0010056!8.26e-11!3;UBERON:0001949!1.05e-10!3;UBERON:0001007!4.85e-10!155;UBERON:0001555!4.85e-10!155;UBERON:0007026!4.85e-10!155;UBERON:0003126!7.50e-10!7;UBERON:0001005!7.50e-10!7;UBERON:0000344!1.12e-09!12;UBERON:0002372!6.03e-09!1;UBERON:0001961!6.03e-09!1;UBERON:0001744!6.03e-09!1;UBERON:0001735!6.03e-09!1;UBERON:0001444!1.32e-08!48;UBERON:0000997!1.84e-08!1;UBERON:0005056!1.84e-08!1;UBERON:0007196!1.85e-08!14;UBERON:0001558!1.85e-08!14;UBERON:0000077!3.55e-08!130;UBERON:0004645!3.79e-08!1;UBERON:0001256!3.79e-08!1;UBERON:0001259!3.79e-08!1;UBERON:0000065!1.16e-07!53;UBERON:0001042!3.12e-07!10;UBERON:0009145!3.12e-07!10;UBERON:0001041!4.54e-07!98;UBERON:0000072!5.65e-07!46;UBERON:0000078!8.90e-07!18 | |ontology_enrichment_uberon=UBERON:0001708!4.02e-17!4;UBERON:0001704!4.02e-17!4;UBERON:0000166!2.33e-16!21;UBERON:0000165!1.50e-15!28;UBERON:0000930!1.50e-15!28;UBERON:0001004!2.52e-12!72;UBERON:0000161!3.33e-12!35;UBERON:0002090!1.35e-11!6;UBERON:0004119!1.43e-11!169;UBERON:0000925!1.43e-11!169;UBERON:0006595!1.43e-11!169;UBERON:0001723!8.26e-11!3;UBERON:0001033!8.26e-11!3;UBERON:0010056!8.26e-11!3;UBERON:0001949!1.05e-10!3;UBERON:0001007!4.85e-10!155;UBERON:0001555!4.85e-10!155;UBERON:0007026!4.85e-10!155;UBERON:0003126!7.50e-10!7;UBERON:0001005!7.50e-10!7;UBERON:0000344!1.12e-09!12;UBERON:0002372!6.03e-09!1;UBERON:0001961!6.03e-09!1;UBERON:0001744!6.03e-09!1;UBERON:0001735!6.03e-09!1;UBERON:0001444!1.32e-08!48;UBERON:0000997!1.84e-08!1;UBERON:0005056!1.84e-08!1;UBERON:0007196!1.85e-08!14;UBERON:0001558!1.85e-08!14;UBERON:0000077!3.55e-08!130;UBERON:0004645!3.79e-08!1;UBERON:0001256!3.79e-08!1;UBERON:0001259!3.79e-08!1;UBERON:0000065!1.16e-07!53;UBERON:0001042!3.12e-07!10;UBERON:0009145!3.12e-07!10;UBERON:0001041!4.54e-07!98;UBERON:0000072!5.65e-07!46;UBERON:0000078!8.90e-07!18 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.88e-21,1;UBERON:0001961,1.88e-21,1;UBERON:0001744,1.88e-21,1;UBERON:0001735,1.88e-21,1;UBERON:0001708,1.28e-20,4;UBERON:0008895,1.28e-20,4;UBERON:0011159,1.03e-16,5;UBERON:0000166,5.98e-15,22;UBERON:0010188,4.24e-14,6;UBERON:0002539,4.24e-14,6;UBERON:0008816,4.24e-14,6;UBERON:0000033,9.71e-13,56;UBERON:0003126,3.53e-12,7;UBERON:0001005,3.53e-12,7;UBERON:0000153,1.69e-11,62;UBERON:0007811,1.69e-11,62;UBERON:0000165,1.96e-11,29;UBERON:0000930,1.96e-11,29;UBERON:0003127,4.09e-11,2;UBERON:0008814,1.37e-10,18;UBERON:0001004,1.32e-09,74;UBERON:0000161,2.81e-09,36;UBERON:0001042,4.75e-09,10;UBERON:0009145,4.75e-09,10;UBERON:0006562,2.62e-08,11;UBERON:0001041,3.73e-08,87;UBERON:0010323,4.04e-08,11;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3;UBERON:0001043,5.18e-08,3;UBERON:0009143,5.18e-08,3;UBERON:0001949,5.54e-08,3;UBERON:0003102,3.76e-07,99;UBERON:0000072,4.00e-07,47;UBERON:0001444,6.83e-07,49 | |||
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|short_description=p3@SPRR2C,p4@SPRR2D,p5@SPRR2A | |short_description=p3@SPRR2C,p4@SPRR2D,p5@SPRR2A | ||
}} | }} |
Revision as of 04:00, 16 November 2012
Short description: | p3@SPRR2C, p4@SPRR2D, p5@SPRR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPRR2C_5end, CAGE_peak_4_at_SPRR2D_5end, CAGE_peak_5_at_SPRR2A_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -5bp_to_NR_003062, uc001fbf.2, uc001fbj.2, uc009wnz.2_5end |
EntrezGene: | 6702,6700,6703 |
HGNC: | 11261, 11264&submit=Submit 11263, 11261, 11264 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 4.07e-27 | 3 |
gingival epithelial cell | 5.54e-08 | 3 |
acinar cell of salivary gland | 6.34e-08 | 3 |
duct epithelial cell | 7.26e-08 | 3 |
branched duct epithelial cell | 7.26e-08 | 3 |
tracheal epithelial cell | 7.26e-08 | 3 |
tracheoblast | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.88e-21 | 1 |
mucosa-associated lymphoid tissue | 1.88e-21 | 1 |
lymphoid tissue | 1.88e-21 | 1 |
tonsillar ring | 1.88e-21 | 1 |
jaw skeleton | 1.28e-20 | 4 |
splanchnocranium | 1.28e-20 | 4 |
primary subdivision of cranial skeletal system | 1.03e-16 | 5 |
oral opening | 5.98e-15 | 22 |
protuberance | 4.24e-14 | 6 |
pharyngeal arch | 4.24e-14 | 6 |
embryonic head | 4.24e-14 | 6 |
head | 9.71e-13 | 56 |
trachea | 3.53e-12 | 7 |
respiratory airway | 3.53e-12 | 7 |
anterior region of body | 1.69e-11 | 62 |
craniocervical region | 1.69e-11 | 62 |
mouth | 1.96e-11 | 29 |
stomodeum | 1.96e-11 | 29 |
open tracheal system trachea | 4.09e-11 | 2 |
pharyngeal arch system | 1.37e-10 | 18 |
respiratory system | 1.32e-09 | 74 |
orifice | 2.81e-09 | 36 |
chordate pharynx | 4.75e-09 | 10 |
pharyngeal region of foregut | 4.75e-09 | 10 |
pharynx | 2.62e-08 | 11 |
foregut | 3.73e-08 | 87 |
cranial skeletal system | 4.04e-08 | 11 |
tongue | 4.52e-08 | 3 |
gustatory system | 4.52e-08 | 3 |
future tongue | 4.52e-08 | 3 |
esophagus | 5.18e-08 | 3 |
esophageal region | 5.18e-08 | 3 |
gingival epithelium | 5.54e-08 | 3 |
surface structure | 3.76e-07 | 99 |
segment of respiratory tract | 4.00e-07 | 47 |
subdivision of head | 6.83e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.