FFCP PHASE1:Hg19::chr3:110790546..110790562,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.43e-18!180;CL:0000057!6.17e-13!75;CL:0002620!4.60e-09!23;CL:0000220!9.93e-09!246;CL:0002321!1.02e-08!248;CL:0000222!2.04e-08!119;CL:0000393!6.34e-07!60;CL:0000211!6.34e-07!60;CL:0000680!7.10e-07!57;CL:0000056!7.10e-07!57;CL:0000355!7.10e-07!57 | |ontology_enrichment_celltype=CL:0000055!5.43e-18!180;CL:0000057!6.17e-13!75;CL:0002620!4.60e-09!23;CL:0000220!9.93e-09!246;CL:0002321!1.02e-08!248;CL:0000222!2.04e-08!119;CL:0000393!6.34e-07!60;CL:0000211!6.34e-07!60;CL:0000680!7.10e-07!57;CL:0000056!7.10e-07!57;CL:0000355!7.10e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.68e-10;23 | |ontology_enrichment_celltype_v019=CL:0002620;8.68e-10;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-12,76;CL:0002620,3.51e-10,23;CL:0000187,7.66e-08,55;CL:0000393,9.03e-08,61;CL:0000211,9.03e-08,61;CL:0000680,4.30e-07,58;CL:0000056,4.30e-07,58;CL:0000355,4.30e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.86e-12!365;UBERON:0000119!1.96e-10!312;UBERON:0000490!5.52e-10!138;UBERON:0000483!7.18e-10!309;UBERON:0000481!1.52e-09!347;UBERON:0000914!2.12e-09!83;UBERON:0002329!2.12e-09!83;UBERON:0003077!2.12e-09!83;UBERON:0003059!2.12e-09!83;UBERON:0007282!2.12e-09!83;UBERON:0009618!2.12e-09!83;UBERON:0007285!2.12e-09!83;UBERON:0000477!2.96e-09!286;UBERON:0005256!1.92e-08!143;UBERON:0004290!1.45e-07!70;UBERON:0000468!8.52e-07!659 | |ontology_enrichment_uberon=UBERON:0000475!6.86e-12!365;UBERON:0000119!1.96e-10!312;UBERON:0000490!5.52e-10!138;UBERON:0000483!7.18e-10!309;UBERON:0000481!1.52e-09!347;UBERON:0000914!2.12e-09!83;UBERON:0002329!2.12e-09!83;UBERON:0003077!2.12e-09!83;UBERON:0003059!2.12e-09!83;UBERON:0007282!2.12e-09!83;UBERON:0009618!2.12e-09!83;UBERON:0007285!2.12e-09!83;UBERON:0000477!2.96e-09!286;UBERON:0005256!1.92e-08!143;UBERON:0004290!1.45e-07!70;UBERON:0000468!8.52e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;3.46e-09;11!UBERON:0001801;3.90e-09;14!UBERON:0002104;1.66e-08;21!UBERON:0007625;3.23e-08;11!UBERON:0000970;8.07e-08;20!UBERON:0001456;1.51e-07;21!UBERON:0000488;3.46e-07;4!UBERON:0000019;3.84e-07;19!UBERON:0000047;3.84e-07;19!UBERON:0004088;3.84e-07;19!UBERON:0010230;3.84e-07;19!UBERON:0001032;5.53e-07;24!UBERON:0004456;5.53e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0006876;3.46e-09;11!UBERON:0001801;3.90e-09;14!UBERON:0002104;1.66e-08;21!UBERON:0007625;3.23e-08;11!UBERON:0000970;8.07e-08;20!UBERON:0001456;1.51e-07;21!UBERON:0000488;3.46e-07;4!UBERON:0000019;3.84e-07;19!UBERON:0000047;3.84e-07;19!UBERON:0004088;3.84e-07;19!UBERON:0010230;3.84e-07;19!UBERON:0001032;5.53e-07;24!UBERON:0004456;5.53e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,3.23e-09,11;UBERON:0001801,3.96e-09,14;UBERON:0000490,4.95e-09,148;UBERON:0001444,5.22e-09,49;UBERON:0003102,2.49e-08,99;UBERON:0007524,2.50e-08,73;UBERON:0000970,2.60e-08,21;UBERON:0002104,2.60e-08,21;UBERON:0007625,3.06e-08,11;UBERON:0001456,4.08e-08,22;UBERON:0002329,6.09e-08,71;UBERON:0003059,6.09e-08,71;UBERON:0007282,6.09e-08,71;UBERON:0004290,6.09e-08,71;UBERON:0009618,6.09e-08,71;UBERON:0000019,1.01e-07,20;UBERON:0000047,1.01e-07,20;UBERON:0010312,1.01e-07,20;UBERON:0004088,1.01e-07,20;UBERON:0010230,1.01e-07,20;UBERON:0003072,1.01e-07,20;UBERON:0004128,1.01e-07,20;UBERON:0003071,1.01e-07,20;UBERON:0003077,1.01e-07,72;UBERON:0007285,1.01e-07,72;UBERON:0000033,1.09e-07,56;UBERON:0007503,2.98e-07,78;UBERON:0000488,3.73e-07,4;UBERON:0002097,6.97e-07,41;UBERON:0000020,8.02e-07,24;UBERON:0001032,8.02e-07,24;UBERON:0004456,8.02e-07,24 | |||
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| ||
|short_description=p3@PVRL3 | |short_description=p3@PVRL3 | ||
}} | }} |
Revision as of 06:33, 17 November 2012
Short description: | p3@PVRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PVRL3_5end |
Coexpression cluster: | C4262_placenta_Ciliary_Fibroblast_Lens_Hair_normal_Smooth |
Association with transcript: | -27bp_to_ENST00000485303_5end |
EntrezGene: | PVRL3 |
HGNC: | 17664 |
UniProt: | Q9NQS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-12 | 76 |
skin fibroblast | 3.51e-10 | 23 |
muscle cell | 7.66e-08 | 55 |
electrically responsive cell | 9.03e-08 | 61 |
electrically active cell | 9.03e-08 | 61 |
muscle precursor cell | 4.30e-07 | 58 |
myoblast | 4.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 3.23e-09 | 11 |
anterior segment of eyeball | 3.96e-09 | 14 |
unilaminar epithelium | 4.95e-09 | 148 |
subdivision of head | 5.22e-09 | 49 |
surface structure | 2.49e-08 | 99 |
dense mesenchyme tissue | 2.50e-08 | 73 |
eye | 2.60e-08 | 21 |
visual system | 2.60e-08 | 21 |
pigment epithelium of eye | 3.06e-08 | 11 |
face | 4.08e-08 | 22 |
somite | 6.09e-08 | 71 |
presomitic mesoderm | 6.09e-08 | 71 |
presumptive segmental plate | 6.09e-08 | 71 |
dermomyotome | 6.09e-08 | 71 |
trunk paraxial mesoderm | 6.09e-08 | 71 |
camera-type eye | 1.01e-07 | 20 |
simple eye | 1.01e-07 | 20 |
immature eye | 1.01e-07 | 20 |
ocular region | 1.01e-07 | 20 |
eyeball of camera-type eye | 1.01e-07 | 20 |
optic cup | 1.01e-07 | 20 |
optic vesicle | 1.01e-07 | 20 |
eye primordium | 1.01e-07 | 20 |
paraxial mesoderm | 1.01e-07 | 72 |
presumptive paraxial mesoderm | 1.01e-07 | 72 |
head | 1.09e-07 | 56 |
epithelial vesicle | 2.98e-07 | 78 |
atypical epithelium | 3.73e-07 | 4 |
skin of body | 6.97e-07 | 41 |
sense organ | 8.02e-07 | 24 |
sensory system | 8.02e-07 | 24 |
entire sense organ system | 8.02e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.