FFCP PHASE1:Hg19::chr20:42863474..42863486,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.99e-50;1!CL:0000911;3.99e-50;1!CL:0000814;3.99e-50;1!CL:0000333;2.71e-40;5!CL:0002521;8.00e-18;3!CL:0002321;2.94e-14;15 | |ontology_enrichment_celltype_v019=CL:0002127;3.99e-50;1!CL:0000911;3.99e-50;1!CL:0000814;3.99e-50;1!CL:0000333;2.71e-40;5!CL:0002521;8.00e-18;3!CL:0002321;2.94e-14;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.99e-50,1;CL:0000914,3.99e-50,1;CL:0000911,3.99e-50,1;CL:0000814,3.99e-50,1;CL:0002042,3.99e-50,1;CL:0002039,3.99e-50,1;CL:0002040,3.99e-50,1;CL:0002041,3.99e-50,1;CL:0000893,7.14e-26,2;CL:0002489,7.14e-26,2;CL:0000809,7.14e-26,2;CL:0000808,7.14e-26,2;CL:0000894,7.14e-26,2;CL:0000806,7.14e-26,2;CL:0000807,7.14e-26,2;CL:0000805,7.14e-26,2;CL:0002425,7.14e-26,2;CL:0002521,8.00e-18,3 | |||
|ontology_enrichment_development_v019=CL:0002425;7.14e-26;2 | |ontology_enrichment_development_v019=CL:0002425;7.14e-26;2 | ||
|ontology_enrichment_disease=DOID:162!1.09e-13!235;DOID:14566!3.07e-13!239;DOID:154!6.47e-10!2;DOID:4236!6.47e-10!2;DOID:0050687!4.57e-07!143 | |ontology_enrichment_disease=DOID:162!1.09e-13!235;DOID:14566!3.07e-13!239;DOID:154!6.47e-10!2;DOID:4236!6.47e-10!2;DOID:0050687!4.57e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:169;8.35e-34;6!DOID:3193;9.18e-26;2!DOID:962;9.18e-26;2!DOID:171;8.54e-21;10!DOID:1192;1.12e-17;3!DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | |ontology_enrichment_disease_v019=DOID:169;8.35e-34;6!DOID:3193;9.18e-26;2!DOID:962;9.18e-26;2!DOID:171;8.54e-21;10!DOID:1192;1.12e-17;3!DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,8.35e-34,6;DOID:3193,9.18e-26,2;DOID:962,9.18e-26,2;DOID:171,8.54e-21,10;DOID:1192,1.12e-17,3;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.71e-40;5!UBERON:0002410;2.71e-40;5!UBERON:0003714;9.18e-26;2!UBERON:0000010;5.74e-23;8!UBERON:0002190;8.00e-18;3!UBERON:0002072;2.94e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0000013;2.71e-40;5!UBERON:0002410;2.71e-40;5!UBERON:0003714;9.18e-26;2!UBERON:0000010;5.74e-23;8!UBERON:0002190;8.00e-18;3!UBERON:0002072;2.94e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.71e-40,5;UBERON:0002410,2.71e-40,5;UBERON:0003714,9.18e-26,2;UBERON:0000010,5.74e-23,8;UBERON:0002190,8.00e-18,3;UBERON:0002370,1.13e-13,4;UBERON:0005058,1.13e-13,4;UBERON:0009113,1.13e-13,4;UBERON:0003295,1.13e-13,4;UBERON:0005562,1.13e-13,4;UBERON:0002072,2.94e-11,5;UBERON:0003351,1.44e-09,6;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7 | |||
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|short_description=p@chr20:42863474..42863486,+ | |short_description=p@chr20:42863474..42863486,+ | ||
}} | }} |
Revision as of 17:54, 17 November 2012
Short description: | p@chr20:42863474..42863486, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:42863474..42863486, + |
Coexpression cluster: | C591_Adipocyte_Hair_heart_left_Osteoblast_skin_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.99e-50 | 1 |
immature NK T cell | 3.99e-50 | 1 |
effector T cell | 3.99e-50 | 1 |
mature NK T cell | 3.99e-50 | 1 |
immature NK T cell stage IV | 3.99e-50 | 1 |
immature NK T cell stage I | 3.99e-50 | 1 |
immature NK T cell stage II | 3.99e-50 | 1 |
immature NK T cell stage III | 3.99e-50 | 1 |
thymocyte | 7.14e-26 | 2 |
double negative thymocyte | 7.14e-26 | 2 |
double-positive, alpha-beta thymocyte | 7.14e-26 | 2 |
DN4 thymocyte | 7.14e-26 | 2 |
DN1 thymic pro-T cell | 7.14e-26 | 2 |
DN2 thymocyte | 7.14e-26 | 2 |
DN3 thymocyte | 7.14e-26 | 2 |
immature single positive thymocyte | 7.14e-26 | 2 |
early T lineage precursor | 7.14e-26 | 2 |
subcutaneous fat cell | 8.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.71e-40 | 5 |
autonomic nervous system | 2.71e-40 | 5 |
neural tissue | 9.18e-26 | 2 |
peripheral nervous system | 5.74e-23 | 8 |
subcutaneous adipose tissue | 8.00e-18 | 3 |
thymus | 1.13e-13 | 4 |
hemolymphoid system gland | 1.13e-13 | 4 |
thymic region | 1.13e-13 | 4 |
pharyngeal gland | 1.13e-13 | 4 |
thymus primordium | 1.13e-13 | 4 |
hypodermis | 2.94e-11 | 5 |
pharyngeal epithelium | 1.44e-09 | 6 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.35e-34 | 6 |
peripheral nerve sheath neoplasm | 9.18e-26 | 2 |
neurofibroma | 9.18e-26 | 2 |
neuroectodermal tumor | 8.54e-21 | 10 |
peripheral nervous system neoplasm | 1.12e-17 | 3 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.