FFCP PHASE1:Hg19::chr6:95268287..95268295,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.50e-82!5;CL:0000540!3.53e-25!6;CL:0000031!3.53e-25!6;CL:0000404!3.53e-25!6;CL:0000039!4.93e-22!7;CL:0000586!4.93e-22!7;CL:0000047!4.49e-19!8;CL:0000148!1.11e-15!10;CL:0000541!1.11e-15!10;CL:0000147!2.20e-11!14;CL:0000133!1.37e-09!59;CL:0000710!3.85e-08!20;CL:0000221!5.65e-08!71 | |ontology_enrichment_celltype=CL:0002322!1.50e-82!5;CL:0000540!3.53e-25!6;CL:0000031!3.53e-25!6;CL:0000404!3.53e-25!6;CL:0000039!4.93e-22!7;CL:0000586!4.93e-22!7;CL:0000047!4.49e-19!8;CL:0000148!1.11e-15!10;CL:0000541!1.11e-15!10;CL:0000147!2.20e-11!14;CL:0000133!1.37e-09!59;CL:0000710!3.85e-08!20;CL:0000221!5.65e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.05e-40;5!CL:0000039;2.74e-29;7!CL:0000586;2.74e-29;7!CL:0000148;1.04e-20;10!CL:0000147;3.93e-15;14!CL:0002321;3.36e-14;15!CL:0000710;6.30e-11;20!CL:0000075;2.30e-08;27 | |ontology_enrichment_celltype_v019=CL:0002322;4.05e-40;5!CL:0000039;2.74e-29;7!CL:0000586;2.74e-29;7!CL:0000148;1.04e-20;10!CL:0000147;3.93e-15;14!CL:0002321;3.36e-14;15!CL:0000710;6.30e-11;20!CL:0000075;2.30e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.05e-40,5;CL:0000039,2.74e-29,7;CL:0000586,2.74e-29,7;CL:0000148,1.04e-20,10;CL:0000541,1.04e-20,10;CL:0000147,3.93e-15,14;CL:0000710,6.30e-11,20;CL:0000075,2.30e-08,27;CL:0002077,7.59e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease=DOID:3095!1.98e-07!22;DOID:2994!1.98e-07!22 | |ontology_enrichment_disease=DOID:3095!1.98e-07!22;DOID:2994!1.98e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.14e-10;22!DOID:2994;4.14e-10;22 | |ontology_enrichment_disease_v019=DOID:3095;4.14e-10;22!DOID:2994;4.14e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.26e-19!8;UBERON:0003135!2.82e-14!11;UBERON:0000991!9.29e-08!21;UBERON:0009196!9.29e-08!21;UBERON:0009117!9.29e-08!21;UBERON:0005564!9.29e-08!21;UBERON:0004176!1.98e-07!22;UBERON:0003101!1.98e-07!22;UBERON:0000079!1.98e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!2.26e-19!8;UBERON:0003135!2.82e-14!11;UBERON:0000991!9.29e-08!21;UBERON:0009196!9.29e-08!21;UBERON:0009117!9.29e-08!21;UBERON:0005564!9.29e-08!21;UBERON:0004176!1.98e-07!22;UBERON:0003101!1.98e-07!22;UBERON:0000079!1.98e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000922;5.02e-12;49!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000922;5.02e-12;49!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p@chr6:95268287..95268295,- | |short_description=p@chr6:95268287..95268295,- | ||
}} | }} |
Revision as of 23:38, 17 November 2012
Short description: | p@chr6:95268287..95268295, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:95268287..95268295, - |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.05e-40 | 5 |
germ line cell | 2.74e-29 | 7 |
germ cell | 2.74e-29 | 7 |
melanocyte | 1.04e-20 | 10 |
melanoblast | 1.04e-20 | 10 |
pigment cell | 3.93e-15 | 14 |
neurecto-epithelial cell | 6.30e-11 | 20 |
columnar/cuboidal epithelial cell | 2.30e-08 | 27 |
ecto-epithelial cell | 7.59e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.