FFCP PHASE1:Hg19::chr7:128828464..128828486,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!1.13e-16!248;CL:0000220!7.00e-16!246;CL:0000055!8.22e-16!180;CL:0000183!1.08e-07!59;CL:0000393!2.71e-07!60;CL:0000211!2.71e-07!60 | |ontology_enrichment_celltype=CL:0002321!1.13e-16!248;CL:0000220!7.00e-16!246;CL:0000055!8.22e-16!180;CL:0000183!1.08e-07!59;CL:0000393!2.71e-07!60;CL:0000211!2.71e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.42e-16,250;CL:0000393,3.94e-07,61;CL:0000211,3.94e-07,61;CL:0000133,9.57e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.95e-19!347;UBERON:0000475!1.95e-17!365;UBERON:0005256!6.78e-14!143;UBERON:0003104!8.88e-14!238;UBERON:0009142!8.88e-14!238;UBERON:0000119!3.12e-13!312;UBERON:0000483!1.47e-12!309;UBERON:0002100!4.23e-12!216;UBERON:0000922!1.56e-11!612;UBERON:0003103!2.77e-11!69;UBERON:0001008!1.58e-10!45;UBERON:0005172!1.81e-10!55;UBERON:0005173!1.81e-10!55;UBERON:0006554!4.05e-10!44;UBERON:0002417!4.66e-10!61;UBERON:0000916!4.66e-10!61;UBERON:0000468!6.83e-10!659;UBERON:0005177!7.38e-10!107;UBERON:0002050!3.17e-09!605;UBERON:0005423!3.17e-09!605;UBERON:0000923!6.45e-09!604;UBERON:0005291!6.45e-09!604;UBERON:0006598!6.45e-09!604;UBERON:0002532!6.45e-09!604;UBERON:0000489!1.40e-08!32;UBERON:0000490!3.22e-08!138;UBERON:0002113!6.13e-08!27;UBERON:0003918!6.13e-08!27;UBERON:0005095!6.13e-08!27;UBERON:0007687!6.13e-08!27;UBERON:0001456!1.17e-07!21;UBERON:0000020!1.32e-07!23;UBERON:0001444!1.54e-07!48;UBERON:0003064!1.99e-07!37;UBERON:0000970!2.46e-07!20;UBERON:0001032!3.62e-07!24;UBERON:0004456!3.62e-07!24;UBERON:0000019!5.23e-07!19;UBERON:0000047!5.23e-07!19;UBERON:0004088!5.23e-07!19;UBERON:0003072!5.23e-07!19;UBERON:0003071!5.23e-07!19;UBERON:0004128!5.23e-07!19;UBERON:0000924!5.32e-07!173;UBERON:0006601!5.32e-07!173;UBERON:0002104!7.24e-07!21;UBERON:0003914!9.52e-07!118 | |ontology_enrichment_uberon=UBERON:0000481!1.95e-19!347;UBERON:0000475!1.95e-17!365;UBERON:0005256!6.78e-14!143;UBERON:0003104!8.88e-14!238;UBERON:0009142!8.88e-14!238;UBERON:0000119!3.12e-13!312;UBERON:0000483!1.47e-12!309;UBERON:0002100!4.23e-12!216;UBERON:0000922!1.56e-11!612;UBERON:0003103!2.77e-11!69;UBERON:0001008!1.58e-10!45;UBERON:0005172!1.81e-10!55;UBERON:0005173!1.81e-10!55;UBERON:0006554!4.05e-10!44;UBERON:0002417!4.66e-10!61;UBERON:0000916!4.66e-10!61;UBERON:0000468!6.83e-10!659;UBERON:0005177!7.38e-10!107;UBERON:0002050!3.17e-09!605;UBERON:0005423!3.17e-09!605;UBERON:0000923!6.45e-09!604;UBERON:0005291!6.45e-09!604;UBERON:0006598!6.45e-09!604;UBERON:0002532!6.45e-09!604;UBERON:0000489!1.40e-08!32;UBERON:0000490!3.22e-08!138;UBERON:0002113!6.13e-08!27;UBERON:0003918!6.13e-08!27;UBERON:0005095!6.13e-08!27;UBERON:0007687!6.13e-08!27;UBERON:0001456!1.17e-07!21;UBERON:0000020!1.32e-07!23;UBERON:0001444!1.54e-07!48;UBERON:0003064!1.99e-07!37;UBERON:0000970!2.46e-07!20;UBERON:0001032!3.62e-07!24;UBERON:0004456!3.62e-07!24;UBERON:0000019!5.23e-07!19;UBERON:0000047!5.23e-07!19;UBERON:0004088!5.23e-07!19;UBERON:0003072!5.23e-07!19;UBERON:0003071!5.23e-07!19;UBERON:0004128!5.23e-07!19;UBERON:0000924!5.32e-07!173;UBERON:0006601!5.32e-07!173;UBERON:0002104!7.24e-07!21;UBERON:0003914!9.52e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.93e-09;30!UBERON:0001008;4.93e-09;30!UBERON:0000489;4.35e-08;29!UBERON:0001456;8.21e-08;21!UBERON:0000020;9.21e-08;23!UBERON:0000970;1.88e-07;20!UBERON:0002113;2.28e-07;24!UBERON:0011143;2.28e-07;24!UBERON:0001032;2.50e-07;24!UBERON:0004456;2.50e-07;24!UBERON:0000019;4.29e-07;19!UBERON:0000047;4.29e-07;19!UBERON:0004088;4.29e-07;19!UBERON:0010230;4.29e-07;19!UBERON:0002104;5.46e-07;21!UBERON:0005172;9.58e-07;52!UBERON:0005173;9.58e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0006554;4.93e-09;30!UBERON:0001008;4.93e-09;30!UBERON:0000489;4.35e-08;29!UBERON:0001456;8.21e-08;21!UBERON:0000020;9.21e-08;23!UBERON:0000970;1.88e-07;20!UBERON:0002113;2.28e-07;24!UBERON:0011143;2.28e-07;24!UBERON:0001032;2.50e-07;24!UBERON:0004456;2.50e-07;24!UBERON:0000019;4.29e-07;19!UBERON:0000047;4.29e-07;19!UBERON:0004088;4.29e-07;19!UBERON:0010230;4.29e-07;19!UBERON:0002104;5.46e-07;21!UBERON:0005172;9.58e-07;52!UBERON:0005173;9.58e-07;52 | ||
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|phase1_expression=3.08853244759946,3.21150785836475,3.52386010239928,2.00146596706261,1.78784437770915,10.4680622892044,2.53299878168311,5.05375898741465,2.08948502559871,7.12628415854376,6.28021051175185,3.27662058195258,3.9565046734268,7.67351388352289,9.61052389610956,4.70627602516243,9.04041792035965,6.57279081348636,5.85519358548608,13.7895585046002,12.0360407834109,13.4785530235578,7.15589967827642,9.99183303032055,7.78364365487777,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,5.51652734687356,5.4217065380085,4.06729411183466,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,68.2659225679093,9.38981203585091,6.64885321586358,3.61439152384566,8.52274448081012,6.80778639115871,1.5905718941022,6.32625331393427,10.3988298880475,9.53436409089025,8.34430464084697,4.45328856692223,8.74308691902101,4.82019775619758,0,0.174129737299267,0,0,0,0,0.198762407366705,2.58070378531837,2.42998351125316,1.69592382577203,2.09749718104953,1.92582629358047,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,2.92874469057803,0,4.0507097394088,2.76829157680647,4.4905874525234,2.59006405111641,4.5994991239765,3.79706263827252,5.1296488300514,0,0,17.4437620857014,1.98788780678127,4.93858995491861,4.36950296683622,7.74458876021797,3.54668382198357,3.36406560085384,11.7423895302675,9.37336683985208,4.97937656639626,2.55950276932407,2.94231425604226,10.5950199351452,14.404398112,3.28050004567315,0,0,0,4.81481444439436,4.20869655357142,5.05622904128095,0.61246251376468,5.89604723096486,1.65321249881225,3.56400857184616,2.22540236350701,2.73048408581408,2.87447256726495,6.06010010234638,7.88246675193374,0.277064115484183,5.70670907145089,3.0648779579902,3.75595147266492,4.99101605904093,6.09924761342131,4.91181994282705,4.4505699243508,3.60109315301283,2.78241828943785,3.09168648054755,2.04728541964749,3.20675031258406,3.02054715999716,0.757301322732344,3.12969655383818,5.65761198865842,5.68015348026583,1.5112814734146,6.44330250779853,3.09217365061275,2.72746120590835,2.58124135850103,13.9050024987739,13.7830959054345,14.8728246872984,12.5429876568598,13.3730050964083,17.153935876564,3.12899064659632,0.643240938192885,2.76269842704961,0,1.44375896333917,0,0,0,0,0,0,0,0,0,2.21446636387394,7.01208869017229,17.6976824872502,16.1709582524096,16.478154526838,4.91413608338813,14.1789577603537,0.882926198829301,8.48620225947483,3.77449182656756,6.14601598288303,2.24803506515239,3.71957197923034,9.35143296101149,9.12263254868909,3.11980435583874,5.77325368101093,10.4337364477569,6.22266079449855,1.73239737313289,1.85194205030644,1.71228737011138,0,0,0,0,0.148631162288728,1.87467667973554,4.53551746136921,3.68615252830205,0.447792613514241,3.19697332365358,5.75074018747817,0,0,0.207328115540772,0.720599767084807,0.6312121671319,5.07983154337352,9.54971063895694,14.0660936652056,1.71072446022705,9.25447434329912,0.300343057843917,8.86061941154792,6.2793407233402,11.3349617896653,6.0137394373179,4.00742318849111,28.6125156681506,1.690605505112,3.72313363218819,3.12022310734098,6.43018435655355,7.09245660116391,4.79559922228979,6.43400971461664,10.8524321078289,11.5253647149308,3.90883421152482,9.24019066730619,3.95975936466715,8.13886318060882,4.35766729300147,7.29802835629016,0,0.502257091432126,0,3.83399768786532,9.18895486672911,7.13184525203592,1.15825045334063,2.26023954805422,2.32779252211864,0,0,0,0.128343036279748,4.57370323600434,0,3.86644406388848,4.02039036802437,3.82763250991898,0,0,0,13.3733725973862,3.50119364741774,6.78162559249339,2.49565033836969,3.7470087647404,3.15404830067869,4.33423235473039,9.32932909155929,9.09630016223939,3.10419213877515,5.31380478828349,9.77156593271027,0.260650843404249,16.8388995417957,18.1866014619754,0,0,0,5.15316871458641,13.3148351608398,9.37409909322009,0.992431231275107,0.920771839728375,3.08726103876381,4.61300937320523,6.14048698880044,2.41280881715411,5.93672265779964,4.62629081407967,4.97172830876756,1.39616165223476,1.03850885836724,2.20799719073923,11.7233666103874,6.81721999031168,1.56537681191024,2.64073230778596,3.09554985611419,10.6210776117134,9.47519187105565,6.54630365387526,27.4522419211899,13.1525302187935,9.07744008478731,0,2.38131187387122,5.82972973475776,4.62681758070868,18.1534113154381,27.5929375620169,4.33289664176565,3.3243040357149,8.73111543416495,0,0,9.4886546293064,13.1205858279882,8.78521665593618,9.99497812982906,12.545016680113,12.8714819876117,1.72279661398852,1.95018073810956,4.82051789532479,6.18692597069581,6.31599330170042,6.90766536267583,3.99726060205139,6.87489567156951,9.42608510442485,7.07381007553637,8.72513949338026,1.65284915360978,2.11409074101617,1.40373983744043,0.708104465988849,4.64845549297286,7.870308670766,2.0911118104818,8.62494024493049,5.32306030317022,1.73986598415015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| ||
|short_description=p1@SMO | |short_description=p1@SMO | ||
}} | }} |
Revision as of 18:12, 18 November 2012
Short description: | p1@SMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SMO_5end |
Coexpression cluster: | NA |
Association with transcript: | -226bp_to_ENST00000249373, NM_005631, uc003vor.2_5end |
EntrezGene: | SMO |
HGNC: | 11119 |
UniProt: | Q99835A4D1K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.42e-16 | 250 |
electrically responsive cell | 3.94e-07 | 61 |
electrically active cell | 3.94e-07 | 61 |
neurectodermal cell | 9.57e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.65e-18 | 160 |
entire embryonic mesenchyme | 1.65e-18 | 160 |
cell layer | 1.31e-11 | 309 |
compound organ | 3.39e-11 | 68 |
renal system | 4.92e-11 | 48 |
epithelium | 5.69e-11 | 306 |
urinary system structure | 1.28e-10 | 47 |
trunk mesenchyme | 3.30e-10 | 122 |
trunk | 4.43e-10 | 199 |
abdomen element | 5.20e-10 | 54 |
abdominal segment element | 5.20e-10 | 54 |
embryo | 1.20e-09 | 592 |
abdominal segment of trunk | 1.26e-09 | 60 |
abdomen | 1.26e-09 | 60 |
trunk region element | 4.39e-09 | 101 |
cavitated compound organ | 2.06e-08 | 31 |
kidney | 9.37e-08 | 26 |
kidney mesenchyme | 9.37e-08 | 26 |
upper urinary tract | 9.37e-08 | 26 |
kidney rudiment | 9.37e-08 | 26 |
kidney field | 9.37e-08 | 26 |
face | 2.56e-07 | 22 |
sense organ | 2.68e-07 | 24 |
sensory system | 2.68e-07 | 24 |
entire sense organ system | 2.68e-07 | 24 |
developing anatomical structure | 3.13e-07 | 581 |
subdivision of head | 3.53e-07 | 49 |
head | 4.73e-07 | 56 |
eye | 5.45e-07 | 21 |
visual system | 5.45e-07 | 21 |
unilaminar epithelium | 6.24e-07 | 148 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.