FFCP PHASE1:Hg19::chr1:100111777..100111820,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!5.99e-18!24;CL:0000071!1.51e-13!18;CL:0002546!1.51e-13!18;CL:0000115!2.46e-11!35;CL:0002078!4.12e-09!44;CL:1000413!7.14e-08!9 | |ontology_enrichment_celltype=CL:0002139!5.99e-18!24;CL:0000071!1.51e-13!18;CL:0002546!1.51e-13!18;CL:0000115!2.46e-11!35;CL:0002078!4.12e-09!44;CL:1000413!7.14e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-24;24!CL:0000071;2.24e-18;18!CL:0000115;2.82e-14;36!CL:1000413;2.47e-11;9!CL:0002078;8.05e-10;45!CL:0000136;5.36e-08;13!CL:0002138;9.91e-08;6!CL:0002544;1.21e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;1.51e-24;24!CL:0000071;2.24e-18;18!CL:0000115;2.82e-14;36!CL:1000413;2.47e-11;9!CL:0002078;8.05e-10;45!CL:0000136;5.36e-08;13!CL:0002138;9.91e-08;6!CL:0002544;1.21e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.08e-25,24;CL:0000071,1.26e-18,18;CL:0002546,1.26e-18,18;CL:0000115,6.52e-18,36;CL:0002078,2.83e-14,45;CL:1000413,1.21e-11,9;CL:0000213,1.11e-08,58;CL:0000215,1.11e-08,58;CL:0005020,8.26e-08,6;CL:0002138,8.26e-08,6;CL:0005022,8.26e-08,6;CL:0002544,1.17e-07,6;CL:0000136,9.14e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.24e-18;18!CL:0005022;9.91e-08;6 | |ontology_enrichment_development_v019=CL:0002546;2.24e-18;18!CL:0005022;9.91e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.26e-18,18;UBERON:0001986,1.26e-18,18;UBERON:0004852,1.26e-18,18;UBERON:0000487,1.99e-14,22;UBERON:0000055,1.87e-13,68;UBERON:0006914,3.54e-12,25;UBERON:0004111,4.06e-12,240;UBERON:0007023,8.64e-12,114;UBERON:0003915,1.21e-11,9;UBERON:0004700,1.21e-11,9;UBERON:0001917,1.21e-11,9;UBERON:0002049,1.47e-11,78;UBERON:0007798,1.47e-11,78;UBERON:0001009,2.10e-11,112;UBERON:0004872,6.88e-11,83;UBERON:0007500,2.82e-10,59;UBERON:0001981,2.82e-10,59;UBERON:0004537,2.82e-10,59;UBERON:0006965,2.82e-10,59;UBERON:0004535,3.41e-10,109;UBERON:0000025,4.93e-10,192;UBERON:0003914,1.19e-09,117;UBERON:0000483,9.63e-07,306 | |||
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| ||
|short_description=p4@PALMD | |short_description=p4@PALMD | ||
}} | }} |
Revision as of 04:05, 19 November 2012
Short description: | p4@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PALMD_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 278bp_to_ENST00000263174_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.08e-25 | 24 |
blood vessel endothelial cell | 1.26e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.26e-18 | 18 |
endothelial cell | 6.52e-18 | 36 |
meso-epithelial cell | 2.83e-14 | 45 |
endothelial cell of artery | 1.21e-11 | 9 |
lining cell | 1.11e-08 | 58 |
barrier cell | 1.11e-08 | 58 |
lymphangioblast | 8.26e-08 | 6 |
endothelial cell of lymphatic vessel | 8.26e-08 | 6 |
vascular lymphangioblast | 8.26e-08 | 6 |
aortic endothelial cell | 1.17e-07 | 6 |
fat cell | 9.14e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.26e-18 | 18 |
endothelium | 1.26e-18 | 18 |
cardiovascular system endothelium | 1.26e-18 | 18 |
simple squamous epithelium | 1.99e-14 | 22 |
vessel | 1.87e-13 | 68 |
squamous epithelium | 3.54e-12 | 25 |
anatomical conduit | 4.06e-12 | 240 |
adult organism | 8.64e-12 | 114 |
endothelial tube | 1.21e-11 | 9 |
arterial system endothelium | 1.21e-11 | 9 |
endothelium of artery | 1.21e-11 | 9 |
vasculature | 1.47e-11 | 78 |
vascular system | 1.47e-11 | 78 |
circulatory system | 2.10e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 6.88e-11 | 83 |
epithelial tube open at both ends | 2.82e-10 | 59 |
blood vessel | 2.82e-10 | 59 |
blood vasculature | 2.82e-10 | 59 |
vascular cord | 2.82e-10 | 59 |
cardiovascular system | 3.41e-10 | 109 |
tube | 4.93e-10 | 192 |
epithelial tube | 1.19e-09 | 117 |
epithelium | 9.63e-07 | 306 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.