FFCP PHASE1:Hg19::chr3:24563837..24563845,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!3.16e-10!12;CL:0000417!3.16e-10!12;CL:0000668!3.16e-10!12;CL:0000414!3.16e-10!12;CL:0000412!3.16e-10!12;CL:0000182!3.16e-10!12 | |ontology_enrichment_celltype=CL:0000181!3.16e-10!12;CL:0000417!3.16e-10!12;CL:0000668!3.16e-10!12;CL:0000414!3.16e-10!12;CL:0000412!3.16e-10!12;CL:0000182!3.16e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.84e-44;12!CL:0002563;1.44e-09;4 | |ontology_enrichment_celltype_v019=CL:0000182;2.84e-44;12!CL:0002563;1.44e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.55e-44,12;CL:0000223,1.09e-14,58;CL:0002563,1.22e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.23e-48;11!UBERON:0009497;6.18e-41;13!UBERON:0001041;3.58e-18;30!UBERON:0003104;2.01e-17;31!CL:0000223;7.56e-10;58 | |ontology_enrichment_development_v019=UBERON:0004161;3.23e-48;11!UBERON:0009497;6.18e-41;13!UBERON:0001041;3.58e-18;30!UBERON:0003104;2.01e-17;31!CL:0000223;7.56e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;3.79e-13;39 | |ontology_enrichment_disease_v019=DOID:7;3.79e-13;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,4.23e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0002022!2.29e-08!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | |ontology_enrichment_uberon=UBERON:0002022!2.29e-08!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.86e-28;19!UBERON:0006925;2.86e-28;19!UBERON:0002423;1.15e-21;25!UBERON:0002365;1.12e-16;31!UBERON:0002330;1.12e-16;31!UBERON:0002368;3.60e-15;33!UBERON:0000949;1.52e-11;43!UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0002417;1.11e-07;58!UBERON:0000916;1.11e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.86e-28;19!UBERON:0006925;2.86e-28;19!UBERON:0002423;1.15e-21;25!UBERON:0002365;1.12e-16;31!UBERON:0002330;1.12e-16;31!UBERON:0002368;3.60e-15;33!UBERON:0000949;1.52e-11;43!UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0002417;1.11e-07;58!UBERON:0000916;1.11e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.30e-28,19;UBERON:0006925,3.30e-28,19;UBERON:0008836,3.30e-28,19;UBERON:0008835,1.82e-24,22;UBERON:0003894,1.82e-24,22;UBERON:0009854,1.95e-23,23;UBERON:0007499,1.28e-21,25;UBERON:0009497,1.28e-21,25;UBERON:0000015,1.28e-21,25;UBERON:0002423,1.28e-21,25;UBERON:0006235,1.28e-21,25;UBERON:0004161,1.28e-21,25;UBERON:0009856,8.14e-21,26;UBERON:0002365,1.43e-17,31;UBERON:0002330,1.43e-17,31;UBERON:0003929,9.69e-16,54;UBERON:0002368,1.22e-15,35;UBERON:0000949,2.66e-12,45;UBERON:0005911,1.58e-10,82;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0001242,1.22e-09,4;UBERON:0001262,1.22e-09,4;UBERON:0004786,1.22e-09,4;UBERON:0004808,1.22e-09,4;UBERON:0001277,1.22e-09,4;UBERON:0002530,1.63e-09,59;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0004921,2.25e-07,118 | |||
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|short_description=p@chr3:24563837..24563845,- | |short_description=p@chr3:24563837..24563845,- | ||
}} | }} |
Revision as of 05:41, 20 November 2012
Short description: | p@chr3:24563837..24563845, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:24563837..24563845, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.55e-44 | 12 |
endodermal cell | 1.09e-14 | 58 |
intestinal epithelial cell | 1.22e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.30e-28 | 19 |
digestive gland | 3.30e-28 | 19 |
liver bud | 3.30e-28 | 19 |
hepatic diverticulum | 1.82e-24 | 22 |
liver primordium | 1.82e-24 | 22 |
digestive tract diverticulum | 1.95e-23 | 23 |
epithelial sac | 1.28e-21 | 25 |
epithelium of foregut-midgut junction | 1.28e-21 | 25 |
anatomical boundary | 1.28e-21 | 25 |
hepatobiliary system | 1.28e-21 | 25 |
foregut-midgut junction | 1.28e-21 | 25 |
septum transversum | 1.28e-21 | 25 |
sac | 8.14e-21 | 26 |
exocrine gland | 1.43e-17 | 31 |
exocrine system | 1.43e-17 | 31 |
gut epithelium | 9.69e-16 | 54 |
endocrine gland | 1.22e-15 | 35 |
endocrine system | 2.66e-12 | 45 |
endo-epithelium | 1.58e-10 | 82 |
abdomen element | 2.40e-10 | 54 |
abdominal segment element | 2.40e-10 | 54 |
intestinal mucosa | 1.22e-09 | 4 |
wall of intestine | 1.22e-09 | 4 |
gastrointestinal system mucosa | 1.22e-09 | 4 |
gastrointestinal system epithelium | 1.22e-09 | 4 |
intestinal epithelium | 1.22e-09 | 4 |
gland | 1.63e-09 | 59 |
abdominal segment of trunk | 2.30e-09 | 60 |
abdomen | 2.30e-09 | 60 |
subdivision of digestive tract | 2.25e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.23e-14 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.