FFCP PHASE1:Hg19::chr6:56311952..56311957,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.12e-25;2!CL:0000174;1.78e-17;3!CL:0000222;9.72e-14;1!CL:0000319;9.72e-14;1!CL:0000159;1.64e-07;2!CL:0002535;1.64e-07;2 | |ontology_enrichment_celltype_v019=CL:0002097;1.12e-25;2!CL:0000174;1.78e-17;3!CL:0000222;9.72e-14;1!CL:0000319;9.72e-14;1!CL:0000159;1.64e-07;2!CL:0002535;1.64e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.63e-25,2;CL:0000174,2.30e-17,3;CL:0000319,5.15e-14,1;CL:0000159,1.20e-07,2;CL:0002535,2.40e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.95e-18!143;DOID:14566!1.55e-16!239;DOID:162!1.71e-15!235;DOID:305!3.37e-14!106;DOID:170!7.11e-07!6 | |ontology_enrichment_disease=DOID:0050687!1.95e-18!143;DOID:14566!1.55e-16!239;DOID:162!1.71e-15!235;DOID:305!3.37e-14!106;DOID:170!7.11e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3307;1.12e-25;2!DOID:3030;9.72e-14;1!DOID:3908;4.55e-11;5!DOID:170;3.27e-09;6!DOID:3910;1.64e-07;2 | |ontology_enrichment_disease_v019=DOID:3307;1.12e-25;2!DOID:3030;9.72e-14;1!DOID:3908;4.55e-11;5!DOID:170;3.27e-09;6!DOID:3910;1.64e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,3.59e-26,2;DOID:3030,5.15e-14,1;DOID:3908,4.33e-11,5;DOID:170,3.71e-09,6;DOID:3910,1.54e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.78e-17;3!UBERON:0001235;1.78e-17;3!UBERON:0006858;1.78e-17;3!UBERON:0007195;9.72e-14;1!UBERON:0001905;1.64e-07;2!UBERON:0004903;1.64e-07;2!UBERON:0002757;1.64e-07;2!UBERON:0010134;1.64e-07;2!UBERON:0006955;1.64e-07;2!UBERON:0005408;1.64e-07;2!UBERON:0004801;1.64e-07;2!UBERON:0001899;1.64e-07;2!UBERON:0002173;1.64e-07;2!UBERON:0002186;1.64e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002369;1.78e-17;3!UBERON:0001235;1.78e-17;3!UBERON:0006858;1.78e-17;3!UBERON:0007195;9.72e-14;1!UBERON:0001905;1.64e-07;2!UBERON:0004903;1.64e-07;2!UBERON:0002757;1.64e-07;2!UBERON:0010134;1.64e-07;2!UBERON:0006955;1.64e-07;2!UBERON:0005408;1.64e-07;2!UBERON:0004801;1.64e-07;2!UBERON:0001899;1.64e-07;2!UBERON:0002173;1.64e-07;2!UBERON:0002186;1.64e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.30e-17,3;UBERON:0001235,2.30e-17,3;UBERON:0006858,2.30e-17,3;UBERON:0007195,1.25e-13,1;UBERON:0004903,1.54e-07,2;UBERON:0002173,1.54e-07,2;UBERON:0002186,1.54e-07,2;UBERON:0001905,2.25e-07,2;UBERON:0002757,2.25e-07,2;UBERON:0010134,2.25e-07,2;UBERON:0005408,2.25e-07,2;UBERON:0001899,2.25e-07,2;UBERON:0006955,2.40e-07,2;UBERON:0004801,2.40e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.410623275218653,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.675105328965065,0.292311015483596,0.504867548488229,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.41254749960294,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,1.42068073403207,0,0,0.307160702099232,0,0,0.445234820091624,0,0,0,0,1.0077309914171,0.511343412510774,0.369254416383208,0,0.449341755736634,0.537063524026827,0,0,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0.482385754501632,0,0.442317039724898,0,0,0,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0.91821828489147,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0.416024019039416,0,0.0979923974143777,0.261177619741208,0,0.343972064943233,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.480952921509202,0,0,0.144090417154106,1.60351234632282,0.171594997861965,0.14405479798815,2.36079817574322,0,0.951329442515298,1.569042694685,0.305994652908965,0,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.885847333632739,0.169346664131569,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,3.16801009558219,0.179287339332845,0.383830394638891,0,0,0,0,0.864221491201268,0,2.39460383124975,0.082092520749339,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0,0.138348634936231,0.124980407962107,0,0.285465333544967,0.470531639396343,0,0.144921028610825,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0.310874401165561,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,1.34833881285112,1.07220795687463,0,0,0.231522474323834,0,0.71635536432595,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0.327609848846413,1.72041036127604,0.633936370075881,0.19998739585493,0.320075189082423,0.344429959321631,0.567515953566836,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0,0,0,0,0.11796972334774,0.183428598521679,0.231051332300676,0.762764190934334,0,0.198916222116275,0,0,0,0.261906694481422,0.49131575253029,0.591424344868181,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0,0.230467975111559,0.171488009437418,0,0.131545547125698,0.472775363535873,0.333694205676207,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0.158013611732727,0.464965701472501,0,1.60342272946051,0.207216164163037,0,0,0,0.118332000730565,0.340853619036631,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0.509781344063451,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0.160482733378337,0.730336388246517,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.213454691755431,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.410623275218653,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.675105328965065,0.292311015483596,0.504867548488229,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.41254749960294,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,1.42068073403207,0,0,0.307160702099232,0,0,0.445234820091624,0,0,0,0,1.0077309914171,0.511343412510774,0.369254416383208,0,0.449341755736634,0.537063524026827,0,0,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0.482385754501632,0,0.442317039724898,0,0,0,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0.91821828489147,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0.416024019039416,0,0.0979923974143777,0.261177619741208,0,0.343972064943233,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.480952921509202,0,0,0.144090417154106,1.60351234632282,0.171594997861965,0.14405479798815,2.36079817574322,0,0.951329442515298,1.569042694685,0.305994652908965,0,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.885847333632739,0.169346664131569,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,3.16801009558219,0.179287339332845,0.383830394638891,0,0,0,0,0.864221491201268,0,2.39460383124975,0.082092520749339,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0,0.138348634936231,0.124980407962107,0,0.285465333544967,0.470531639396343,0,0.144921028610825,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0.310874401165561,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,1.34833881285112,1.07220795687463,0,0,0.231522474323834,0,0.71635536432595,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0.327609848846413,1.72041036127604,0.633936370075881,0.19998739585493,0.320075189082423,0.344429959321631,0.567515953566836,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0,0,0,0,0.11796972334774,0.183428598521679,0.231051332300676,0.762764190934334,0,0.198916222116275,0,0,0,0.261906694481422,0.49131575253029,0.591424344868181,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0,0.230467975111559,0.171488009437418,0,0.131545547125698,0.472775363535873,0.333694205676207,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0.158013611732727,0.464965701472501,0,1.60342272946051,0.207216164163037,0,0,0,0.118332000730565,0.340853619036631,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0.509781344063451,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0.160482733378337,0.730336388246517,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.213454691755431,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr6:56311952..56311957,- | |short_description=p@chr6:56311952..56311957,- | ||
}} | }} |
Revision as of 06:21, 20 November 2012
Short description: | p@chr6:56311952..56311957, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:56311952..56311957, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.63e-25 | 2 |
steroid hormone secreting cell | 2.30e-17 | 3 |
mucus secreting cell | 5.15e-14 | 1 |
seromucus secreting cell | 1.20e-07 | 2 |
epithelial cell of cervix | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.30e-17 | 3 |
adrenal cortex | 2.30e-17 | 3 |
adrenal/interrenal gland | 2.30e-17 | 3 |
stroma of bone marrow | 1.25e-13 | 1 |
bronchoalveolar duct junction | 1.54e-07 | 2 |
alveolar duct | 1.54e-07 | 2 |
bronchiole | 1.54e-07 | 2 |
pineal body | 2.25e-07 | 2 |
regional part of epithalamus | 2.25e-07 | 2 |
secretory circumventricular organ | 2.25e-07 | 2 |
circumventricular organ | 2.25e-07 | 2 |
epithalamus | 2.25e-07 | 2 |
uterine epithelium | 2.40e-07 | 2 |
cervix epithelium | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.59e-26 | 2 |
mucinous adenocarcinoma | 5.15e-14 | 1 |
non-small cell lung carcinoma | 4.33e-11 | 5 |
endocrine gland cancer | 3.71e-09 | 6 |
lung adenocarcinoma | 1.54e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.