FFCP PHASE1:Hg19::chr10:4868807..4868822,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:4868807..4868822,-|id=chr10:4868807..4868822,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;2.07e-12;1!CL:0002595;8.48e-10;5!CL:0000650;7.82e-07;2!CL:1000500;7.82e-07;2!CL:1000618;7.82e-07;2!CL:1001318;7.82e-07;2!CL:0002262;7.82e-07;2!CL:1000398;7.82e-07;2!CL:0002173;7.82e-07;2!CL:0002593;7.82e-07;2|ontology_enrichment_celltype_v019_2=CL:0002591,2.46e-12,1;CL:0002595,9.70e-10,5;CL:0002262,6.07e-07,2;CL:1000398,6.07e-07,2|ontology_enrichment_development_v019=UBERON:0007123;8.48e-10;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;7.82e-07;2|ontology_enrichment_disease_v019_2=DOID:3307,5.11e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003513;8.27e-15;7!UBERON:0007195;2.07e-12;1!UBERON:0002046;8.48e-10;5!UBERON:0003834;8.48e-10;5!UBERON:0001533;8.48e-10;5!UBERON:0001281;7.82e-07;2!UBERON:0003497;7.82e-07;2!UBERON:0003909;7.82e-07;2!UBERON:0000078;7.82e-07;2!UBERON:0003567;7.82e-07;2!UBERON:0003835;7.82e-07;2!UBERON:0003838;7.82e-07;2!UBERON:0003586;7.82e-07;2!UBERON:0005169;7.82e-07;2!UBERON:0002321;7.82e-07;2!UBERON:0002012;7.82e-07;2!UBERON:0002456;7.82e-07;2!UBERON:0005215;7.82e-07;2!UBERON:0002303;7.82e-07;2!UBERON:0008886;7.82e-07;2!UBERON:0002319;7.82e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003513,7.73e-15,7;UBERON:0007195,2.75e-12,1;UBERON:0002046,6.22e-10,5;UBERON:0004117,6.22e-10,5;UBERON:0007689,6.22e-10,5;UBERON:0007123,6.22e-10,5;UBERON:0003091,6.22e-10,5;UBERON:0003834,9.70e-10,5;UBERON:0001533,9.70e-10,5;UBERON:0009722,1.06e-09,11;UBERON:0007690,1.06e-09,11;UBERON:0001281,6.07e-07,2;UBERON:0003497,6.07e-07,2;UBERON:0003909,6.07e-07,2;UBERON:0003835,6.07e-07,2;UBERON:0000078,8.52e-07,2;UBERON:0007497,8.52e-07,2;UBERON:0003643,8.52e-07,2;UBERON:0003504,8.52e-07,2;UBERON:0003469,8.52e-07,2;UBERON:0003496,8.52e-07,2;UBERON:0002012,8.52e-07,2;UBERON:0008886,8.52e-07,2;UBERON:0007303,8.52e-07,2;UBERON:0002061,8.52e-07,2;UBERON:0005432,8.52e-07,2;UBERON:0004363,8.52e-07,2|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0.739508020333575,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0.436194716338694,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,1.24564449799115,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0.444859689486181,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0,0.665188192387692,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0.22452937262617,0,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.421352420106746,0,0.122834317311768,0,0,0.741800787835671,0,0,0.505008341862199,0.125118519871964,0,0.877955241761676,0.30648779579902,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0,0,0.581267877027924,0.383382679165211,0,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,2.0694614258501,0,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0,0.410635780069046,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,0,0.270946437543853,1.00337954770971,0.509752546090077,0.831076008928724,0.2238747547221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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:4868807..4868822,- | |||
|id=chr10:4868807..4868822,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.07e-12;1!CL:0002595;8.48e-10;5!CL:0000650;7.82e-07;2!CL:1000500;7.82e-07;2!CL:1000618;7.82e-07;2!CL:1001318;7.82e-07;2!CL:0002262;7.82e-07;2!CL:1000398;7.82e-07;2!CL:0002173;7.82e-07;2!CL:0002593;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.46e-12,1;CL:0002595,9.70e-10,5;CL:0002262,6.07e-07,2;CL:1000398,6.07e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.48e-10;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.82e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,5.11e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;8.27e-15;7!UBERON:0007195;2.07e-12;1!UBERON:0002046;8.48e-10;5!UBERON:0003834;8.48e-10;5!UBERON:0001533;8.48e-10;5!UBERON:0001281;7.82e-07;2!UBERON:0003497;7.82e-07;2!UBERON:0003909;7.82e-07;2!UBERON:0000078;7.82e-07;2!UBERON:0003567;7.82e-07;2!UBERON:0003835;7.82e-07;2!UBERON:0003838;7.82e-07;2!UBERON:0003586;7.82e-07;2!UBERON:0005169;7.82e-07;2!UBERON:0002321;7.82e-07;2!UBERON:0002012;7.82e-07;2!UBERON:0002456;7.82e-07;2!UBERON:0005215;7.82e-07;2!UBERON:0002303;7.82e-07;2!UBERON:0008886;7.82e-07;2!UBERON:0002319;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,7.73e-15,7;UBERON:0007195,2.75e-12,1;UBERON:0002046,6.22e-10,5;UBERON:0004117,6.22e-10,5;UBERON:0007689,6.22e-10,5;UBERON:0007123,6.22e-10,5;UBERON:0003091,6.22e-10,5;UBERON:0003834,9.70e-10,5;UBERON:0001533,9.70e-10,5;UBERON:0009722,1.06e-09,11;UBERON:0007690,1.06e-09,11;UBERON:0001281,6.07e-07,2;UBERON:0003497,6.07e-07,2;UBERON:0003909,6.07e-07,2;UBERON:0003835,6.07e-07,2;UBERON:0000078,8.52e-07,2;UBERON:0007497,8.52e-07,2;UBERON:0003643,8.52e-07,2;UBERON:0003504,8.52e-07,2;UBERON:0003469,8.52e-07,2;UBERON:0003496,8.52e-07,2;UBERON:0002012,8.52e-07,2;UBERON:0008886,8.52e-07,2;UBERON:0007303,8.52e-07,2;UBERON:0002061,8.52e-07,2;UBERON:0005432,8.52e-07,2;UBERON:0004363,8.52e-07,2 | |||
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| |||
|short_description=p@chr10:4868807..4868822,- | |||
}} |
Revision as of 13:31, 10 September 2013
Short description: | p@chr10:4868807..4868822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:4868807..4868822, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.46e-12 | 1 |
smooth muscle cell of the subclavian artery | 9.70e-10 | 5 |
endothelial cell of sinusoid | 6.07e-07 | 2 |
endothelial cell of hepatic sinusoid | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 7.73e-15 | 7 |
stroma of bone marrow | 2.75e-12 | 1 |
thyroid gland | 6.22e-10 | 5 |
pharyngeal pouch | 6.22e-10 | 5 |
thyroid diverticulum | 6.22e-10 | 5 |
pharyngeal pouch 2 | 6.22e-10 | 5 |
thyroid primordium | 6.22e-10 | 5 |
thoracic segment blood vessel | 9.70e-10 | 5 |
subclavian artery | 9.70e-10 | 5 |
entire pharyngeal arch endoderm | 1.06e-09 | 11 |
early pharyngeal endoderm | 1.06e-09 | 11 |
hepatic sinusoid | 6.07e-07 | 2 |
abdomen blood vessel | 6.07e-07 | 2 |
sinusoid | 6.07e-07 | 2 |
abdominal segment blood vessel | 6.07e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.52e-07 | 2 |
developing epithelial placode | 8.52e-07 | 2 |
respiratory system arterial blood vessel | 8.52e-07 | 2 |
respiratory system blood vessel | 8.52e-07 | 2 |
respiratory system artery | 8.52e-07 | 2 |
head blood vessel | 8.52e-07 | 2 |
pulmonary artery | 8.52e-07 | 2 |
pulmonary vascular system | 8.52e-07 | 2 |
pharyngeal vasculature | 8.52e-07 | 2 |
truncus arteriosus | 8.52e-07 | 2 |
aortic sac | 8.52e-07 | 2 |
pharyngeal arch artery | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.11e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.