FFCP PHASE1:Hg19::chr11:10328534..10328568,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:10328534..10328568,+|id=chr11:10328534..10328568,+|ontology_enrichment_celltype=CL:0000057!4.53e-11!75;CL:0002057!1.94e-10!42;CL:0002620!5.85e-10!23;CL:0000860!5.59e-09!45;CL:0000136!8.35e-08!15;CL:0000055!8.53e-08!180;CL:0000548!1.48e-07!679;CL:0000004!1.48e-07!679;CL:0000255!1.48e-07!679;CL:0000048!2.78e-07!430;CL:0000012!4.59e-07!682;CL:0002371!8.13e-07!591;CL:0000723!8.84e-07!436|ontology_enrichment_celltype_v019=CL:0000860;1.03e-17;33!CL:0002057;1.03e-17;33!CL:0000473;2.10e-13;39!CL:0000234;2.10e-13;39!CL:0000136;1.53e-11;13!CL:0002620;2.31e-11;23!CL:0000576;4.76e-07;48|ontology_enrichment_celltype_v019_2=CL:0000048,1.62e-16,427;CL:0002320,3.23e-16,361;CL:0000723,9.49e-16,433;CL:0000034,9.18e-15,441;CL:0000134,1.49e-14,354;CL:0000860,7.51e-14,42;CL:0002057,7.51e-14,42;CL:0000473,4.25e-13,48;CL:0000234,4.25e-13,48;CL:0000136,6.51e-13,15;CL:0000057,3.98e-12,76;CL:0002620,1.80e-11,23;CL:0000219,6.49e-11,386;CL:0002194,1.11e-08,59;CL:0000576,1.11e-08,59;CL:0000040,1.11e-08,59;CL:0000559,1.11e-08,59;CL:0002009,3.92e-08,61;CL:0000766,1.67e-07,72;CL:0000839,6.31e-07,66|ontology_enrichment_development_v019=CL:0002057;2.71e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;5.01e-07;5!DOID:450;5.01e-07;5!DOID:66;5.01e-07;5!DOID:423;5.01e-07;5!DOID:0080000;5.01e-07;5!DOID:11722;5.01e-07;5|ontology_enrichment_disease_v019_2=DOID:17,4.44e-07,5;DOID:450,4.44e-07,5;DOID:66,4.44e-07,5;DOID:423,4.44e-07,5;DOID:0080000,4.44e-07,5;DOID:11722,4.44e-07,5|ontology_enrichment_uberon=UBERON:0002199!3.52e-09!45;UBERON:0002416!3.52e-09!45;UBERON:0002097!3.03e-08!40;UBERON:0003102!6.29e-08!95;UBERON:0000468!1.72e-07!659;UBERON:0004923!3.20e-07!57;UBERON:0000480!8.71e-07!626|ontology_enrichment_uberon_v019=UBERON:0002199;2.58e-08;46!UBERON:0002416;2.58e-08;46!UBERON:0002097;2.81e-08;41!UBERON:0004457;6.07e-08;9!UBERON:0000042;6.07e-08;9!UBERON:0003102;3.56e-07;50!UBERON:0003688;7.23e-07;6!UBERON:0002358;7.23e-07;6!UBERON:0003684;7.23e-07;6!UBERON:0001178;7.23e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.77e-15,371;UBERON:0002199,2.15e-12,46;UBERON:0002416,2.15e-12,46;UBERON:0002097,1.84e-10,41;UBERON:0002371,1.83e-07,76;UBERON:0001434,3.28e-07,100;UBERON:0003688,5.04e-07,6;UBERON:0002358,5.04e-07,6;UBERON:0003684,5.04e-07,6;UBERON:0001178,5.04e-07,6;UBERON:0002204,6.49e-07,167|phase1_expression=4.36028110249336,5.35251309727458,1.83240725324762,17.0124607200322,5.81049422755474,9.59572376510406,7.59899634504932,0,1.56711376919903,0,0.697801167972428,0.655324116390517,0.263766978228454,1.73272894144065,2.31978163009541,0.672325146451775,0,0,0,0.123121058076788,1.42800483870977,0,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0.919421224478927,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,1.74477886535478,0.377875943688809,0.485168122375632,3.0215774797739,2.46700732813095,2.47765096716083,1.7261543539329,2.30544635876191,7.56743135643473,4.82643953031266,2.5819387343353,5.41705946377367,1.88242339542605,1.36453075028923,3.82029923556644,5.50951006267625,1.28371610830437,5.11469700639233,1.64925650093358,1.79517291859469,1.70489900213078,4.35313857942876,2.8369261234557,3.11411124497787,5.02497330513487,1.5644487552606,3.25783267057675,6.05399502633369,1.47311054395026,3.79754864929061,0,0,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,1.0843174571537,3.50936537445123,3.47631645505977,0.795285947051099,1.94653948121054,0,0.443458794925128,0.175669571386252,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,2.4406205754817,0.367663080345869,0,0,0.22452937262617,0,1.53316637465883,0,0.549605231791222,1.31780417436063,3.87780264148325,0,0,0.379891534993739,2.25095607382472,2.29469296599051,0.709336764396714,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,1.05950199351452,1.15235184896,0,0.936480230490962,1.1409436430889,2.24173020827702,0.352303495931295,0.971237666208789,0.421352420106746,0.408308342509787,0.491337269247072,0.206651562351531,2.37600571456411,5.68713937340681,0,1.43723628363248,0.336672227908132,0.250237039743928,0,0,3.98434134538726,1.35214253015937,0.453728732640084,3.40840307808838,4.48470516518992,12.2920502672546,6.60200411385685,3.91599611106068,7.9868567414145,4.46680455195816,1.18143432568886,1.75386609290158,5.55354303337052,6.81169249953015,6.95078044320891,4.9701342952326,1.81353776809752,2.7129694769678,0.193260853163297,0,0,0,0.265059536642971,0.69716365721711,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:10328534..10328568,+ | |||
|id=chr11:10328534..10328568,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.53e-11!75;CL:0002057!1.94e-10!42;CL:0002620!5.85e-10!23;CL:0000860!5.59e-09!45;CL:0000136!8.35e-08!15;CL:0000055!8.53e-08!180;CL:0000548!1.48e-07!679;CL:0000004!1.48e-07!679;CL:0000255!1.48e-07!679;CL:0000048!2.78e-07!430;CL:0000012!4.59e-07!682;CL:0002371!8.13e-07!591;CL:0000723!8.84e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-17;33!CL:0002057;1.03e-17;33!CL:0000473;2.10e-13;39!CL:0000234;2.10e-13;39!CL:0000136;1.53e-11;13!CL:0002620;2.31e-11;23!CL:0000576;4.76e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.62e-16,427;CL:0002320,3.23e-16,361;CL:0000723,9.49e-16,433;CL:0000034,9.18e-15,441;CL:0000134,1.49e-14,354;CL:0000860,7.51e-14,42;CL:0002057,7.51e-14,42;CL:0000473,4.25e-13,48;CL:0000234,4.25e-13,48;CL:0000136,6.51e-13,15;CL:0000057,3.98e-12,76;CL:0002620,1.80e-11,23;CL:0000219,6.49e-11,386;CL:0002194,1.11e-08,59;CL:0000576,1.11e-08,59;CL:0000040,1.11e-08,59;CL:0000559,1.11e-08,59;CL:0002009,3.92e-08,61;CL:0000766,1.67e-07,72;CL:0000839,6.31e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.01e-07;5!DOID:450;5.01e-07;5!DOID:66;5.01e-07;5!DOID:423;5.01e-07;5!DOID:0080000;5.01e-07;5!DOID:11722;5.01e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.44e-07,5;DOID:450,4.44e-07,5;DOID:66,4.44e-07,5;DOID:423,4.44e-07,5;DOID:0080000,4.44e-07,5;DOID:11722,4.44e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.52e-09!45;UBERON:0002416!3.52e-09!45;UBERON:0002097!3.03e-08!40;UBERON:0003102!6.29e-08!95;UBERON:0000468!1.72e-07!659;UBERON:0004923!3.20e-07!57;UBERON:0000480!8.71e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.58e-08;46!UBERON:0002416;2.58e-08;46!UBERON:0002097;2.81e-08;41!UBERON:0004457;6.07e-08;9!UBERON:0000042;6.07e-08;9!UBERON:0003102;3.56e-07;50!UBERON:0003688;7.23e-07;6!UBERON:0002358;7.23e-07;6!UBERON:0003684;7.23e-07;6!UBERON:0001178;7.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.77e-15,371;UBERON:0002199,2.15e-12,46;UBERON:0002416,2.15e-12,46;UBERON:0002097,1.84e-10,41;UBERON:0002371,1.83e-07,76;UBERON:0001434,3.28e-07,100;UBERON:0003688,5.04e-07,6;UBERON:0002358,5.04e-07,6;UBERON:0003684,5.04e-07,6;UBERON:0001178,5.04e-07,6;UBERON:0002204,6.49e-07,167 | |||
|phase1_expression=4.36028110249336,5.35251309727458,1.83240725324762,17.0124607200322,5.81049422755474,9.59572376510406,7.59899634504932,0,1.56711376919903,0,0.697801167972428,0.655324116390517,0.263766978228454,1.73272894144065,2.31978163009541,0.672325146451775,0,0,0,0.123121058076788,1.42800483870977,0,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0.919421224478927,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,1.74477886535478,0.377875943688809,0.485168122375632,3.0215774797739,2.46700732813095,2.47765096716083,1.7261543539329,2.30544635876191,7.56743135643473,4.82643953031266,2.5819387343353,5.41705946377367,1.88242339542605,1.36453075028923,3.82029923556644,5.50951006267625,1.28371610830437,5.11469700639233,1.64925650093358,1.79517291859469,1.70489900213078,4.35313857942876,2.8369261234557,3.11411124497787,5.02497330513487,1.5644487552606,3.25783267057675,6.05399502633369,1.47311054395026,3.79754864929061,0,0,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,1.0843174571537,3.50936537445123,3.47631645505977,0.795285947051099,1.94653948121054,0,0.443458794925128,0.175669571386252,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,2.4406205754817,0.367663080345869,0,0,0.22452937262617,0,1.53316637465883,0,0.549605231791222,1.31780417436063,3.87780264148325,0,0,0.379891534993739,2.25095607382472,2.29469296599051,0.709336764396714,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,1.05950199351452,1.15235184896,0,0.936480230490962,1.1409436430889,2.24173020827702,0.352303495931295,0.971237666208789,0.421352420106746,0.408308342509787,0.491337269247072,0.206651562351531,2.37600571456411,5.68713937340681,0,1.43723628363248,0.336672227908132,0.250237039743928,0,0,3.98434134538726,1.35214253015937,0.453728732640084,3.40840307808838,4.48470516518992,12.2920502672546,6.60200411385685,3.91599611106068,7.9868567414145,4.46680455195816,1.18143432568886,1.75386609290158,5.55354303337052,6.81169249953015,6.95078044320891,4.9701342952326,1.81353776809752,2.7129694769678,0.193260853163297,0,0,0,0.265059536642971,0.69716365721711,0.414644220061482,0.504641701751257,0.36497735907583,1.56449532329816,10.935095949279,1.38134921352481,11.6091982007995,7.21879481669586,1.41968160047813,0.168584690078102,0.482022059766964,0.772057809126758,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.686271241194102,0.219500570817251,0,0.502644862058154,0,1.3032332212413,0,2.88662684050547,0,0,1.29929802984966,3.24089858803628,2.85381228351897,0.790204397959275,0,0.984868024349589,0.468008530278475,0,0,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0.87192013766656,1.1734125731352,0,0,0.845302752556,1.86156681609409,5.2003718455683,0.514414748524284,0,1.3321108950805,0.428933980974443,0,0.823240336780769,0.325736184293735,0.710783897485092,0,0.602878754119172,0,0.399891964728228,1.2162378064119,0,4.21667878966063,0,0,0,1.73737568001095,1.84928690295345,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,1.49801404789436,0,0.414415513436035,0.613457458595699,1.50051156317903,0.813795071099207,4.36738809214695,14.2743191037729,4.41566762095017,2.34282829985426,0.601892199455438,0,1.03473071292505,0.664225598535437,0.737476674166813,2.69339204851057,2.54541504701563,1.02943027143257,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0,2.48107807818777,0.920771839728375,3.36792113319688,4.10045277618243,2.55853624533352,1.28683136914886,5.93672265779964,1.69630663182921,1.24293207719189,0.410635780069046,0.519254429183621,1.51073491997947,0.483437798366489,1.80455823272956,0.552485933615378,0.574072240823034,1.27463817604702,2.36023946926963,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0.510281115829547,0.647747748306418,0,0,1.00337954770971,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.183138929636687,0,0,0.650060246036521,3.21367859688319,0.096670718292122,0.308097234229289,0.307007349452259,1.51620229732984,1.18162269355101,0.435050081742686,0.596586391912706,0.623224249527161,0.495854746082934,0.384380134730212,0.638063562472921,0,0.929691098594572,1.88887408098384,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,1.2655176988749,0.38126038784765,1.02359116524534,0.42793898803392,0,0.78494864019923,2.87795932133304,2.47083326762449,1.88499843753098,0,0,0,1.46290121726877,1.46228093778771,1.05650146756755,0.9554993798559,0.282810863907425,0,0,0,1.75380354101505,0,0,0,0,0.281695602532241,0.430234056612155,0.3929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| |||
|short_description=p@chr11:10328534..10328568,+ | |||
}} |
Revision as of 15:25, 10 September 2013
Short description: | p@chr11:10328534..10328568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:10328534..10328568, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.62e-16 | 427 |
connective tissue cell | 3.23e-16 | 361 |
somatic stem cell | 9.49e-16 | 433 |
stem cell | 9.18e-15 | 441 |
mesenchymal cell | 1.49e-14 | 354 |
classical monocyte | 7.51e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.51e-14 | 42 |
defensive cell | 4.25e-13 | 48 |
phagocyte | 4.25e-13 | 48 |
fat cell | 6.51e-13 | 15 |
fibroblast | 3.98e-12 | 76 |
skin fibroblast | 1.80e-11 | 23 |
motile cell | 6.49e-11 | 386 |
monopoietic cell | 1.11e-08 | 59 |
monocyte | 1.11e-08 | 59 |
monoblast | 1.11e-08 | 59 |
promonocyte | 1.11e-08 | 59 |
macrophage dendritic cell progenitor | 3.92e-08 | 61 |
myeloid leukocyte | 1.67e-07 | 72 |
myeloid lineage restricted progenitor cell | 6.31e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.77e-15 | 371 |
integument | 2.15e-12 | 46 |
integumental system | 2.15e-12 | 46 |
skin of body | 1.84e-10 | 41 |
bone marrow | 1.83e-07 | 76 |
skeletal system | 3.28e-07 | 100 |
omentum | 5.04e-07 | 6 |
peritoneum | 5.04e-07 | 6 |
abdominal cavity | 5.04e-07 | 6 |
visceral peritoneum | 5.04e-07 | 6 |
musculoskeletal system | 6.49e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.44e-07 | 5 |
myotonic disease | 4.44e-07 | 5 |
muscle tissue disease | 4.44e-07 | 5 |
myopathy | 4.44e-07 | 5 |
muscular disease | 4.44e-07 | 5 |
myotonic dystrophy | 4.44e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.