FFCP PHASE1:Hg19::chr11:63998366..63998375,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5271|TSSclassifier=S|UniProt=Q86VG4|association_with_transcript=-6bp_to_BC051008_5end|description=CAGE_peak_9_at_DNAJC4_5end|id=chr11:63998366..63998375,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002577;4.97e-12;3!CL:0000349;2.97e-07;19|ontology_enrichment_celltype_v019_2=CL:0002577,3.37e-12,3;CL:0000349,2.86e-07,19|ontology_enrichment_development_v019=UBERON:0006298;1.20e-09;1!UBERON:0010227;1.20e-09;1!UBERON:0010226;1.20e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.95e-08!115|ontology_enrichment_uberon_v019=UBERON:0004151;4.97e-12;3!UBERON:0002084;1.20e-09;1!UBERON:0002079;1.20e-09;1!UBERON:0001736;1.20e-09;1!UBERON:0002146;1.20e-09;1!UBERON:0002082;1.20e-09;1!UBERON:0005623;1.20e-09;1!UBERON:0001987;3.03e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.01e-12,3;UBERON:0002079,7.50e-10,1;UBERON:0001736,8.17e-10,1;UBERON:0006298,8.17e-10,1;UBERON:0002084,8.91e-10,1;UBERON:0002082,8.91e-10,1;UBERON:0010226,8.91e-10,1;UBERON:0002146,2.26e-09,1;UBERON:0005623,2.26e-09,1;UBERON:0001987,2.27e-09,4;UBERON:0004340,2.27e-09,4|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0,0.154934401160603,0,0,0,0.200544447470142,0,0.447830948479849,0.971680998056939,0.515151135268373,0,0.377875943688809,0.242584061187816,0.464858073811369,0.822335776043652,0.619412741790207,0,0,0,0.344745680736619,0,0,0.376484679085209,0.818718450173537,0,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0.48217676009124,0,0.19891667719909,0,0,0.546138611262131,1.77901850772711,0,0,0,0.661044872784862,0,0,0,0.382273228125229,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0,0,0.523916301990851,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0.368502951935304,0.309977343527296,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0,0,0.194874010322397,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0.573609190778008,0.121973706129595,0.132529768321485,0,0.414644220061482,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.880484340132261,0.207328115540772,0.720599767084807,1.00993946741104,0.063497894292169,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0,2.29723871668228,0,0,0,0,0.224170287987055,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0.902838299183157,9.09630016223939,0,0,0,0.521301686808497,0.979005787313703,0.686286847621712,0,0,0,1.21251028578504,1.66435439510497,0.30239029332968,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.321707842287215,0,0,0.355123450626254,0.246381468041427,0,0,0.483437798366489,0.802025881213139,0.368323955743585,0,0,0.655622074797121,0,0,0,0,0,0,0.170093705276516,0,0,0.812839312631559,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.412164046590889,0,0.082509499920588,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0.290033387828457,0,0,0.661139661443912,0.384380134730212,0,0.6069466851333,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0.422215270595328,0,0,0.349934720244983,0.192444225451024,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.222886768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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5271 | |||
|TSSclassifier=S | |||
|UniProt=Q86VG4 | |||
|association_with_transcript=-6bp_to_BC051008_5end | |||
|description=CAGE_peak_9_at_DNAJC4_5end | |||
|id=chr11:63998366..63998375,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.97e-12;3!CL:0000349;2.97e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.37e-12,3;CL:0000349,2.86e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.20e-09;1!UBERON:0010227;1.20e-09;1!UBERON:0010226;1.20e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.95e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;4.97e-12;3!UBERON:0002084;1.20e-09;1!UBERON:0002079;1.20e-09;1!UBERON:0001736;1.20e-09;1!UBERON:0002146;1.20e-09;1!UBERON:0002082;1.20e-09;1!UBERON:0005623;1.20e-09;1!UBERON:0001987;3.03e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.01e-12,3;UBERON:0002079,7.50e-10,1;UBERON:0001736,8.17e-10,1;UBERON:0006298,8.17e-10,1;UBERON:0002084,8.91e-10,1;UBERON:0002082,8.91e-10,1;UBERON:0010226,8.91e-10,1;UBERON:0002146,2.26e-09,1;UBERON:0005623,2.26e-09,1;UBERON:0001987,2.27e-09,4;UBERON:0004340,2.27e-09,4 | |||
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| |||
|short_description=p9@DNAJC4 | |||
}} |
Revision as of 18:43, 10 September 2013
Short description: | p9@DNAJC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_DNAJC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_BC051008_5end |
EntrezGene: | DNAJC4 |
HGNC: | 5271 |
UniProt: | Q86VG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.37e-12 | 3 |
extraembryonic cell | 2.86e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.01e-12 | 3 |
left cardiac atrium | 7.50e-10 | 1 |
submandibular gland | 8.17e-10 | 1 |
submandibular gland primordium | 8.17e-10 | 1 |
heart left ventricle | 8.91e-10 | 1 |
cardiac ventricle | 8.91e-10 | 1 |
future cardiac ventricle | 8.91e-10 | 1 |
pulmonary valve | 2.26e-09 | 1 |
semi-lunar valve | 2.26e-09 | 1 |
placenta | 2.27e-09 | 4 |
allantois | 2.27e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.