FFCP PHASE1:Hg19::chr11:69703842..69703848,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2159|description=CAGE_peak_at_chr11:69703842..69703848,+|id=chr11:69703842..69703848,+|ontology_enrichment_celltype=CL:0002322!3.80e-14!5;CL:0000066!4.68e-07!254|ontology_enrichment_celltype_v019=CL:0002322;3.60e-45;5!CL:0000039;4.52e-21;7!CL:0000586;4.52e-21;7!CL:0002321;4.73e-15;15!CL:0000540;2.39e-14;6!CL:0000404;2.39e-14;6!CL:0000148;7.43e-09;10|ontology_enrichment_celltype_v019_2=CL:0002322,1.90e-45,5;CL:0000039,3.78e-21,7;CL:0000586,3.78e-21,7;CL:0000540,2.74e-14,6;CL:0000031,2.74e-14,6;CL:0000404,2.74e-14,6;CL:0000047,7.44e-11,8;CL:0000148,6.86e-09,10;CL:0000541,6.86e-09,10;CL:0000221,1.22e-08,72|ontology_enrichment_development_v019=UBERON:0009117;7.87e-15;10!UBERON:0005564;7.87e-15;10!CL:0000031;2.39e-14;6|ontology_enrichment_disease=DOID:162!3.27e-09!235;DOID:305!7.42e-09!106;DOID:14566!8.39e-09!239;DOID:0050687!2.57e-08!143;DOID:1036!2.04e-07!8|ontology_enrichment_disease_v019=DOID:3095;2.43e-10;22!DOID:2994;2.43e-10;22|ontology_enrichment_disease_v019_2=DOID:3095,2.27e-10,22;DOID:2994,2.27e-10,22|ontology_enrichment_uberon=UBERON:0000473!3.69e-08!8|ontology_enrichment_uberon_v019=UBERON:0000473;1.79e-18;8!UBERON:0003135;1.67e-13;11!UBERON:0000922;1.48e-12;49!UBERON:0000991;3.76e-07;21!UBERON:0003101;7.85e-07;22!UBERON:0000079;7.85e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.53e-18,8;UBERON:0003135,1.49e-13,11;UBERON:0000991,3.55e-07,21;UBERON:0009196,3.55e-07,21;UBERON:0009117,3.55e-07,21;UBERON:0005564,3.55e-07,21;UBERON:0004176,7.44e-07,22;UBERON:0003101,7.44e-07,22;UBERON:0000079,7.44e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,1.34171076742555,1.72288698817931,2.5562667431294,1.55491582523056,5.04641701751257,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0,0.335643173951685,0.37950746544837,0.317873157960757,0,0,0,0,0,0,0,1.48260564340311,0,0,0,0,0,0,0,0,0,0,0,0,9.32005200369854,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,3.53656926623042,1.2378549293751,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0.176689145945881,1.73622634443823,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.462102664601353,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.594600453887843,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.788857810965923,0,0,0,0,0,0.432626562123789,0.126166424835079,12.2377440599339,0,4.28353084916323,2.93939145792117,1.10273879441814,1.75495277504663,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0|short_description=p@chr11:69703842..69703848,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2159 | |||
|description=CAGE_peak_at_chr11:69703842..69703848,+ | |||
|id=chr11:69703842..69703848,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.80e-14!5;CL:0000066!4.68e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.60e-45;5!CL:0000039;4.52e-21;7!CL:0000586;4.52e-21;7!CL:0002321;4.73e-15;15!CL:0000540;2.39e-14;6!CL:0000404;2.39e-14;6!CL:0000148;7.43e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.90e-45,5;CL:0000039,3.78e-21,7;CL:0000586,3.78e-21,7;CL:0000540,2.74e-14,6;CL:0000031,2.74e-14,6;CL:0000404,2.74e-14,6;CL:0000047,7.44e-11,8;CL:0000148,6.86e-09,10;CL:0000541,6.86e-09,10;CL:0000221,1.22e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.87e-15;10!UBERON:0005564;7.87e-15;10!CL:0000031;2.39e-14;6 | |||
|ontology_enrichment_disease=DOID:162!3.27e-09!235;DOID:305!7.42e-09!106;DOID:14566!8.39e-09!239;DOID:0050687!2.57e-08!143;DOID:1036!2.04e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.43e-10;22!DOID:2994;2.43e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.27e-10,22;DOID:2994,2.27e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.69e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.79e-18;8!UBERON:0003135;1.67e-13;11!UBERON:0000922;1.48e-12;49!UBERON:0000991;3.76e-07;21!UBERON:0003101;7.85e-07;22!UBERON:0000079;7.85e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.53e-18,8;UBERON:0003135,1.49e-13,11;UBERON:0000991,3.55e-07,21;UBERON:0009196,3.55e-07,21;UBERON:0009117,3.55e-07,21;UBERON:0005564,3.55e-07,21;UBERON:0004176,7.44e-07,22;UBERON:0003101,7.44e-07,22;UBERON:0000079,7.44e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,1.34171076742555,1.72288698817931,2.5562667431294,1.55491582523056,5.04641701751257,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0,0.335643173951685,0.37950746544837,0.317873157960757,0,0,0,0,0,0,0,1.48260564340311,0,0,0,0,0,0,0,0,0,0,0,0,9.32005200369854,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,3.53656926623042,1.2378549293751,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0.176689145945881,1.73622634443823,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.462102664601353,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.594600453887843,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.788857810965923,0,0,0,0,0,0.432626562123789,0.126166424835079,12.2377440599339,0,4.28353084916323,2.93939145792117,1.10273879441814,1.75495277504663,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:69703842..69703848,+ | |||
}} |
Revision as of 19:24, 10 September 2013
Short description: | p@chr11:69703842..69703848, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69703842..69703848, + |
Coexpression cluster: | C2159_teratocarcinoma_H9_HES3GFP_chronic_embryonic_acantholytic_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.90e-45 | 5 |
germ line cell | 3.78e-21 | 7 |
germ cell | 3.78e-21 | 7 |
neuron | 2.74e-14 | 6 |
neuroblast | 2.74e-14 | 6 |
electrically signaling cell | 2.74e-14 | 6 |
neuronal stem cell | 7.44e-11 | 8 |
melanocyte | 6.86e-09 | 10 |
melanoblast | 6.86e-09 | 10 |
ectodermal cell | 1.22e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 1.53e-18 | 8 |
male reproductive organ | 1.49e-13 | 11 |
gonad | 3.55e-07 | 21 |
indifferent external genitalia | 3.55e-07 | 21 |
indifferent gonad | 3.55e-07 | 21 |
gonad primordium | 3.55e-07 | 21 |
external genitalia | 7.44e-07 | 22 |
male organism | 7.44e-07 | 22 |
male reproductive system | 7.44e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.27e-10 | 22 |
germ cell cancer | 2.27e-10 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.