FFCP PHASE1:Hg19::chr11:93861993..93862102,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=24145|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8599|TSSclassifier=S|UniProt=Q96RD7|association_with_transcript=0bp_to_ENST00000227638,ENST00000436171,NM_015368,uc001peq.2,uc001per.2_5end|description=CAGE_peak_1_at_PANX1_5end|id=chr11:93861993..93862102,+|ontology_enrichment_celltype=CL:0000144!7.91e-18!625;CL:0000012!8.27e-15!682;CL:0000548!1.17e-14!679;CL:0000004!1.17e-14!679;CL:0000255!1.17e-14!679;CL:0002371!2.44e-14!591;CL:0002057!2.35e-11!42;CL:0000557!1.45e-10!71;CL:0000034!2.14e-10!444;CL:0000723!8.06e-10!436;CL:0000003!1.79e-09!722;CL:0000860!4.01e-09!45;CL:0000048!6.18e-09!430;CL:0002009!1.34e-08!65;CL:0000839!2.09e-08!70;CL:0002194!3.96e-08!63;CL:0000576!3.96e-08!63;CL:0000040!3.96e-08!63;CL:0000559!3.96e-08!63;CL:0000063!5.04e-07!578;CL:0000219!6.33e-07!390;CL:0000221!9.62e-07!71|ontology_enrichment_celltype_v019=CL:0000860;2.32e-12;33!CL:0002057;2.32e-12;33!CL:0000473;1.08e-10;39!CL:0000234;1.08e-10;39!CL:0000576;1.87e-07;48|ontology_enrichment_celltype_v019_2=CL:0000473,5.16e-12,48;CL:0000234,5.16e-12,48;CL:0000557,5.61e-12,67;CL:0000860,2.35e-11,42;CL:0002057,2.35e-11,42;CL:0000034,2.44e-11,441;CL:0000723,9.77e-11,433;CL:0002009,6.94e-10,61;CL:0000048,8.33e-10,427;CL:0000839,1.33e-09,66;CL:0002194,2.19e-09,59;CL:0000576,2.19e-09,59;CL:0000040,2.19e-09,59;CL:0000559,2.19e-09,59;CL:0000219,1.06e-07,386;CL:0000766,8.98e-07,72|ontology_enrichment_development_v019=CL:0002057;5.37e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!6.81e-11!167;UBERON:0004765!3.07e-09!101;UBERON:0001434!3.07e-09!101;UBERON:0002371!4.34e-09!80;UBERON:0001474!1.64e-08!86;UBERON:0002390!9.65e-07!102;UBERON:0003061!9.65e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.98e-11,167;UBERON:0002371,3.03e-10,76;UBERON:0001474,1.47e-09,82;UBERON:0001434,2.59e-09,100;UBERON:0004765,3.35e-09,90;UBERON:0000926,3.08e-08,315;UBERON:0004120,3.08e-08,315;UBERON:0006603,3.08e-08,315;UBERON:0002390,1.58e-07,98;UBERON:0003061,1.58e-07,98|phase1_expression=11.8090946525862,9.84862409898522,10.7125347112938,4.00293193412522,10.7270662662549,4.36169262050184,15.1979926900986,23.3736353167927,4.70134130759709,15.7269719360966,5.58240934377942,16.6015442818931,10.8144461073666,5.94078494208224,6.95934489028623,21.5144046864568,16.8754467846714,22.6396128020086,17.5655807564582,5.0479633811483,5.30401797235058,5.95563970808367,6.29719171688325,8.6230887795917,8.16027157366218,7.71775398054308,7.30695246104517,7.71365656874057,6.29382842958246,6.1412703695554,4.64448369948228,11.9524759182261,20.7832083956993,8.8740962440029,0.619737604642413,0.995184627411951,8.22081230137572,19.9438347071476,14.4392002178502,14.1057065965304,16.5697450937544,12.6318529747402,15.7121096256854,8.72389432677388,12.4699061417307,10.6736986922639,36.9562168680039,32.0710952657024,48.9336066014264,37.6877033942017,30.483124076963,39.0195679316166,47.91964962239,39.3745656986134,44.6907405761328,25.6009581777942,16.3743690034707,26.2926476800749,50.8099261335698,32.7347607617615,32.6061934157511,13.5239033076554,15.159237979244,15.7703157697097,60.3635216347455,38.5821952789975,31.1411124497787,41.9585270978761,40.6756676367757,29.754871724601,46.6157617027694,41.6153728665948,39.5577984301106,4.22510572623884,11.0554235981823,7.33805259279316,3.03287304095537,6.30742949934327,5.6253955343978,2.56511469367124,8.95125047395906,7.85455861187926,12.3197371122926,7.64594055766984,9.7846017924991,18.7761297929263,8.80871171479227,12.6445536789986,8.59358334620321,9.54053754535364,14.7995371968457,14.6809297342735,9.93910393125595,7.93027971474155,10.6496626966492,7.37475437370216,4.72103448273199,4.32311839024081,7.19605246498282,6.35308682484577,5.86660079940463,6.15482147455153,9.74133642039557,6.90744832688076,8.24896540929544,10.8551608345974,8.12411591295047,9.60684897942564,10.0145697621106,3.94650971048823,4.69795030235942,4.63684937176084,2.81744470007915,4.0131124213457,7.31748666634838,4.87230173599535,6.51474839123266,12.026960591892,6.32549230048757,9.5569624297229,10.4173352617027,8.55406840003537,7.82990619204418,7.29523683580185,8.74515085866421,6.39298580518846,7.39015197228942,12.2980113367087,12.8371293976084,12.4548987339207,12.1903433156981,6.70700859703636,11.1240428803871,5.42158728576849,6.51739283826656,6.95263291011954,2.3858578411533,5.83961844363163,11.3441780596881,14.4124108350667,9.31048728347136,5.30465255765736,7.28590576585084,5.93255108455087,2.59637914923747,4.70150290708022,4.25465473660369,5.24679373471752,5.14795419702115,4.82894751728434,4.77029777680092,7.74211135595512,4.16568601929113,7.91431118693613,5.03399323451887,4.67700671298115,2.71693456497854,6.46041897923322,7.47109151642091,4.35136796594071,5.63961043952806,4.56163263431108,3.66093086322254,5.8826092855339,6.48113558305408,4.19708722935175,2.2452937262617,3.6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94,0,8.34255607258718,5.07269810395284,6.78685814530212,7.27811696747131,14.1111375322852,11.7361187430217,6.76315155195334,6.01682626794058,15.3295852214675,7.03362610109783,8.64292091788694,14.0843849058683,14.7856086217045,5.60561952332676,3.12431239445539,2.27355476151302,5.77083872764552,31.7245389230567,2.74128883428591,5.45832296228224,27.0841716313816,12.9040051915991,2.14280734351315,4.37168838884471,4.24875922965642,4.32558163567465,7.27359435333638,6.56833729067942,5.83059232087223,4.41803264349406,4.53832137583659,12.0557717701648,18.2419499102993,5.65150268523701,4.55635210756405,22.9823173917307,11.8710633666234,8.42117605752624,15.7658057002727,2.85906176706625,7.26862613970542,8.13689977576877,5.9111812582877,15.2325159298748,6.2164849248911,5.4629912670064,6.22133695632683,2.15113679410139,7.57324804675618,10.5664621901356,4.65725755210022,12.1426640328347,17.6817639828662,3.82215575590973,2.79638579494481,6.18346471776031,5.12055284925532,24.60229581314,11.3955715610434,6.95888658802919,8.25708688200537,25.7333409808316,5.76957247967968,7.37304562820925,8.80979439903888,4.39762066981717,10.5673990496671,5.32501690944818,8.30526329915038,0.940634592723046,5.63841140033983,7.3059729601504,2.1593931382644,4.75274240523338,5.4945244585842,8.83620996376648,7.33074560242858,7.60603078088211,6.29629282327052,4.99951028095841,7.76368717774522,2.96893056749923,5.84269110597214,5.96348068425903,6.02026249236095,7.88857810965923,3.87551494088214,23.5629372783804,3.7031878836078,15.2517957448368,8.78133694399695,12.1135437394661,10.7241461109817,4.47988845051152,4.43444753540029,11.32076010136,6.68043513163901,7.81106646046182,2.50707539292375,9.32077988084345,11.7904217268719,3.31667775783512,5.89568076412803,2.98527574661373,6.18967521805725,8.52573609835281,5.52464957233135,11.2131862580613,7.00118741059814,6.66986723562124,7.18465268059972,11.2936989358143,5.9269806652837,9.61077552261863,6.32054677437425,25.560626343846,9.07182439960581,9.653614114347,9.79094702961797,11.7320471201727,5.98983076496046,4.88275413978886,9.98635161278269,6.44076139491284,7.69364381527759|short_description=p1@PANX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=24145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8599 | |||
|TSSclassifier=S | |||
|UniProt=Q96RD7 | |||
|association_with_transcript=0bp_to_ENST00000227638,ENST00000436171,NM_015368,uc001peq.2,uc001per.2_5end | |||
|description=CAGE_peak_1_at_PANX1_5end | |||
|id=chr11:93861993..93862102,+ | |||
|ontology_enrichment_celltype=CL:0000144!7.91e-18!625;CL:0000012!8.27e-15!682;CL:0000548!1.17e-14!679;CL:0000004!1.17e-14!679;CL:0000255!1.17e-14!679;CL:0002371!2.44e-14!591;CL:0002057!2.35e-11!42;CL:0000557!1.45e-10!71;CL:0000034!2.14e-10!444;CL:0000723!8.06e-10!436;CL:0000003!1.79e-09!722;CL:0000860!4.01e-09!45;CL:0000048!6.18e-09!430;CL:0002009!1.34e-08!65;CL:0000839!2.09e-08!70;CL:0002194!3.96e-08!63;CL:0000576!3.96e-08!63;CL:0000040!3.96e-08!63;CL:0000559!3.96e-08!63;CL:0000063!5.04e-07!578;CL:0000219!6.33e-07!390;CL:0000221!9.62e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-12;33!CL:0002057;2.32e-12;33!CL:0000473;1.08e-10;39!CL:0000234;1.08e-10;39!CL:0000576;1.87e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.16e-12,48;CL:0000234,5.16e-12,48;CL:0000557,5.61e-12,67;CL:0000860,2.35e-11,42;CL:0002057,2.35e-11,42;CL:0000034,2.44e-11,441;CL:0000723,9.77e-11,433;CL:0002009,6.94e-10,61;CL:0000048,8.33e-10,427;CL:0000839,1.33e-09,66;CL:0002194,2.19e-09,59;CL:0000576,2.19e-09,59;CL:0000040,2.19e-09,59;CL:0000559,2.19e-09,59;CL:0000219,1.06e-07,386;CL:0000766,8.98e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.81e-11!167;UBERON:0004765!3.07e-09!101;UBERON:0001434!3.07e-09!101;UBERON:0002371!4.34e-09!80;UBERON:0001474!1.64e-08!86;UBERON:0002390!9.65e-07!102;UBERON:0003061!9.65e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.98e-11,167;UBERON:0002371,3.03e-10,76;UBERON:0001474,1.47e-09,82;UBERON:0001434,2.59e-09,100;UBERON:0004765,3.35e-09,90;UBERON:0000926,3.08e-08,315;UBERON:0004120,3.08e-08,315;UBERON:0006603,3.08e-08,315;UBERON:0002390,1.58e-07,98;UBERON:0003061,1.58e-07,98 | |||
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| |||
|short_description=p1@PANX1 | |||
}} |
Revision as of 20:12, 10 September 2013
Short description: | p1@PANX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PANX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000227638, ENST00000436171, NM_015368, uc001peq.2, uc001per.2_5end |
EntrezGene: | PANX1 |
HGNC: | 8599 |
UniProt: | Q96RD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.16e-12 | 48 |
phagocyte | 5.16e-12 | 48 |
granulocyte monocyte progenitor cell | 5.61e-12 | 67 |
classical monocyte | 2.35e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-11 | 42 |
stem cell | 2.44e-11 | 441 |
somatic stem cell | 9.77e-11 | 433 |
macrophage dendritic cell progenitor | 6.94e-10 | 61 |
multi fate stem cell | 8.33e-10 | 427 |
myeloid lineage restricted progenitor cell | 1.33e-09 | 66 |
monopoietic cell | 2.19e-09 | 59 |
monocyte | 2.19e-09 | 59 |
monoblast | 2.19e-09 | 59 |
promonocyte | 2.19e-09 | 59 |
motile cell | 1.06e-07 | 386 |
myeloid leukocyte | 8.98e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.98e-11 | 167 |
bone marrow | 3.03e-10 | 76 |
bone element | 1.47e-09 | 82 |
skeletal system | 2.59e-09 | 100 |
skeletal element | 3.35e-09 | 90 |
mesoderm | 3.08e-08 | 315 |
mesoderm-derived structure | 3.08e-08 | 315 |
presumptive mesoderm | 3.08e-08 | 315 |
hematopoietic system | 1.58e-07 | 98 |
blood island | 1.58e-07 | 98 |
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