FFCP PHASE1:Hg19::chr12:115122262..115122271,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11602|TSSclassifier=N|UniProt=C9JIZ8,O15119|association_with_transcript=-293bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end|coexpression_cluster_id=C43|description=CAGE_peak_7_at_TBX3_5end|id=chr12:115122262..115122271,-|ontology_enrichment_celltype=CL:0000057!8.00e-11!75;CL:0000055!4.65e-10!180;CL:0002620!3.31e-07!23|ontology_enrichment_celltype_v019=CL:0002552;7.46e-16;5!CL:0002564;3.52e-09;3!CL:0000197;5.04e-08;6!CL:0000098;5.04e-08;6!CL:0002167;5.04e-08;6!CL:0002602;5.24e-07;2|ontology_enrichment_celltype_v019_2=CL:0002552,7.79e-16,5;CL:0002564,4.09e-09,3;CL:0000197,9.53e-08,6;CL:0000098,9.53e-08,6;CL:0002167,9.53e-08,6;CL:0002602,6.03e-07,2|ontology_enrichment_development_v019=UBERON:0007297;6.55e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!2.32e-12!347;UBERON:0000475!4.81e-12!365;UBERON:0005256!1.28e-10!143;UBERON:0000914!8.28e-10!83;UBERON:0002329!8.28e-10!83;UBERON:0003077!8.28e-10!83;UBERON:0003059!8.28e-10!83;UBERON:0007282!8.28e-10!83;UBERON:0009618!8.28e-10!83;UBERON:0007285!8.28e-10!83;UBERON:0003104!1.88e-09!238;UBERON:0009142!1.88e-09!238;UBERON:0003102!2.50e-09!95;UBERON:0000468!9.02e-09!659;UBERON:0002100!1.36e-08!216;UBERON:0000467!6.01e-07!625;UBERON:0004290!6.73e-07!70;UBERON:0000480!7.45e-07!626|ontology_enrichment_uberon_v019=UBERON:0011135;1.66e-14;5!UBERON:0002216;1.66e-14;5!UBERON:0011134;1.66e-14;5!UBERON:0002209;1.66e-14;5!UBERON:0002213;1.66e-14;5!UBERON:0007844;1.66e-14;5!UBERON:0011138;1.66e-14;5!UBERON:0001130;1.66e-14;5!UBERON:0001066;1.66e-14;5!UBERON:0001468;1.66e-14;5!UBERON:0000075;7.35e-14;16!UBERON:0006947;4.76e-11;3!UBERON:0004054;4.76e-11;3!UBERON:0001828;9.20e-10;8!UBERON:0002242;3.52e-09;3!UBERON:0004905;5.97e-09;8!UBERON:0000982;5.97e-09;8!UBERON:0004770;5.97e-09;8!UBERON:0005904;2.30e-08;4!UBERON:0002119;3.09e-07;4!UBERON:0006444;5.24e-07;2!UBERON:0001995;5.24e-07;2!UBERON:0004715;5.24e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.21e-14,5;UBERON:0002216,2.21e-14,5;UBERON:0011134,2.21e-14,5;UBERON:0002209,2.21e-14,5;UBERON:0002213,2.21e-14,5;UBERON:0005856,2.21e-14,5;UBERON:0005866,2.21e-14,5;UBERON:0005863,2.21e-14,5;UBERON:0007844,2.21e-14,5;UBERON:0011138,2.21e-14,5;UBERON:0001130,2.21e-14,5;UBERON:0001066,2.21e-14,5;UBERON:0001468,2.21e-14,5;UBERON:0000075,6.64e-14,16;UBERON:0006947,4.95e-11,3;UBERON:0004054,4.95e-11,3;UBERON:0011137,6.94e-10,14;UBERON:0001828,9.44e-10,8;UBERON:0002242,4.09e-09,3;UBERON:0003068,4.09e-09,3;UBERON:0002328,4.09e-09,3;UBERON:0004880,4.09e-09,3;UBERON:0004905,7.09e-09,8;UBERON:0000982,7.09e-09,8;UBERON:0004770,7.09e-09,8;UBERON:0005904,2.37e-08,4;UBERON:0000165,2.67e-07,29;UBERON:0000930,2.67e-07,29;UBERON:0002119,3.35e-07,4;UBERON:0006444,6.03e-07,2;UBERON:0001995,6.03e-07,2;UBERON:0004715,6.03e-07,2;UBERON:0003104,8.01e-07,160;UBERON:0009142,8.01e-07,160|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.982935746006035,0.697801167972428,0.218441372130172,0,2.35156070624089,1.32558950291166,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.980771418680752,0.151357427644931,0,0,1.5608003841516,0.570471821544449,1.19558944441441,0.23486899728753,0.161872944368132,0.280901613404497,3.26646674007829,2.33385202892359,2.16984140469107,3.56400857184616,1.48360157567134,0,0,3.36672227908132,3.503318556415,1.6623846929051,0.438977620880838,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0.423863802319124,0.600182192168805,0.412210116953756,0,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.276149695926898,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0.474541238222193,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,1.06375246633948,0,0,1.41849132023278,1.5985330740966,0.428933980974443,3.25572963234866,0.823240336780769,0.977208552881205,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0,0,0,0,2.85273810081437,0.868687840005475,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.50051156317903,1.35632511849868,1.24782516918484,1.07057393278297,1.10391690523754,2.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11602 | |||
|TSSclassifier=N | |||
|UniProt=C9JIZ8,O15119 | |||
|association_with_transcript=-293bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_7_at_TBX3_5end | |||
|id=chr12:115122262..115122271,- | |||
|ontology_enrichment_celltype=CL:0000057!8.00e-11!75;CL:0000055!4.65e-10!180;CL:0002620!3.31e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002552;7.46e-16;5!CL:0002564;3.52e-09;3!CL:0000197;5.04e-08;6!CL:0000098;5.04e-08;6!CL:0002167;5.04e-08;6!CL:0002602;5.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,7.79e-16,5;CL:0002564,4.09e-09,3;CL:0000197,9.53e-08,6;CL:0000098,9.53e-08,6;CL:0002167,9.53e-08,6;CL:0002602,6.03e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.55e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.32e-12!347;UBERON:0000475!4.81e-12!365;UBERON:0005256!1.28e-10!143;UBERON:0000914!8.28e-10!83;UBERON:0002329!8.28e-10!83;UBERON:0003077!8.28e-10!83;UBERON:0003059!8.28e-10!83;UBERON:0007282!8.28e-10!83;UBERON:0009618!8.28e-10!83;UBERON:0007285!8.28e-10!83;UBERON:0003104!1.88e-09!238;UBERON:0009142!1.88e-09!238;UBERON:0003102!2.50e-09!95;UBERON:0000468!9.02e-09!659;UBERON:0002100!1.36e-08!216;UBERON:0000467!6.01e-07!625;UBERON:0004290!6.73e-07!70;UBERON:0000480!7.45e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.66e-14;5!UBERON:0002216;1.66e-14;5!UBERON:0011134;1.66e-14;5!UBERON:0002209;1.66e-14;5!UBERON:0002213;1.66e-14;5!UBERON:0007844;1.66e-14;5!UBERON:0011138;1.66e-14;5!UBERON:0001130;1.66e-14;5!UBERON:0001066;1.66e-14;5!UBERON:0001468;1.66e-14;5!UBERON:0000075;7.35e-14;16!UBERON:0006947;4.76e-11;3!UBERON:0004054;4.76e-11;3!UBERON:0001828;9.20e-10;8!UBERON:0002242;3.52e-09;3!UBERON:0004905;5.97e-09;8!UBERON:0000982;5.97e-09;8!UBERON:0004770;5.97e-09;8!UBERON:0005904;2.30e-08;4!UBERON:0002119;3.09e-07;4!UBERON:0006444;5.24e-07;2!UBERON:0001995;5.24e-07;2!UBERON:0004715;5.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.21e-14,5;UBERON:0002216,2.21e-14,5;UBERON:0011134,2.21e-14,5;UBERON:0002209,2.21e-14,5;UBERON:0002213,2.21e-14,5;UBERON:0005856,2.21e-14,5;UBERON:0005866,2.21e-14,5;UBERON:0005863,2.21e-14,5;UBERON:0007844,2.21e-14,5;UBERON:0011138,2.21e-14,5;UBERON:0001130,2.21e-14,5;UBERON:0001066,2.21e-14,5;UBERON:0001468,2.21e-14,5;UBERON:0000075,6.64e-14,16;UBERON:0006947,4.95e-11,3;UBERON:0004054,4.95e-11,3;UBERON:0011137,6.94e-10,14;UBERON:0001828,9.44e-10,8;UBERON:0002242,4.09e-09,3;UBERON:0003068,4.09e-09,3;UBERON:0002328,4.09e-09,3;UBERON:0004880,4.09e-09,3;UBERON:0004905,7.09e-09,8;UBERON:0000982,7.09e-09,8;UBERON:0004770,7.09e-09,8;UBERON:0005904,2.37e-08,4;UBERON:0000165,2.67e-07,29;UBERON:0000930,2.67e-07,29;UBERON:0002119,3.35e-07,4;UBERON:0006444,6.03e-07,2;UBERON:0001995,6.03e-07,2;UBERON:0004715,6.03e-07,2;UBERON:0003104,8.01e-07,160;UBERON:0009142,8.01e-07,160 | |||
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| |||
|short_description=p7@TBX3 | |||
}} |
Revision as of 21:03, 10 September 2013
Short description: | p7@TBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TBX3_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -293bp_to_ENST00000349155, ENST00000361100, NM_005996, NM_016569, uc001tvt.1, uc001tvu.1, uc010syw.1_5end |
EntrezGene: | TBX3 |
HGNC: | 11602 |
UniProt: | C9JIZ8O15119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 7.79e-16 | 5 |
nucleus pulposus cell of intervertebral disc | 4.09e-09 | 3 |
receptor cell | 9.53e-08 | 6 |
sensory epithelial cell | 9.53e-08 | 6 |
olfactory epithelial cell | 9.53e-08 | 6 |
annulus pulposus cell | 6.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.21e-14 | 5 |
symphysis | 2.21e-14 | 5 |
nonsynovial joint | 2.21e-14 | 5 |
fibrous joint | 2.21e-14 | 5 |
cartilaginous joint | 2.21e-14 | 5 |
developing mesenchymal condensation | 2.21e-14 | 5 |
pre-cartilage condensation | 2.21e-14 | 5 |
cartilaginous condensation | 2.21e-14 | 5 |
cartilage element | 2.21e-14 | 5 |
post-cranial axial skeletal system | 2.21e-14 | 5 |
vertebral column | 2.21e-14 | 5 |
intervertebral disk | 2.21e-14 | 5 |
intervertebral joint | 2.21e-14 | 5 |
subdivision of skeletal system | 6.64e-14 | 16 |
male genital duct | 4.95e-11 | 3 |
internal male genitalia | 4.95e-11 | 3 |
axial skeletal system | 6.94e-10 | 14 |
gingiva | 9.44e-10 | 8 |
nucleus pulposus | 4.09e-09 | 3 |
axial mesoderm | 4.09e-09 | 3 |
notochord | 4.09e-09 | 3 |
chordamesoderm | 4.09e-09 | 3 |
articulation | 7.09e-09 | 8 |
skeletal joint | 7.09e-09 | 8 |
articular system | 7.09e-09 | 8 |
duct of male reproductive system | 2.37e-08 | 4 |
mouth | 2.67e-07 | 29 |
stomodeum | 2.67e-07 | 29 |
left ovary | 3.35e-07 | 4 |
annulus fibrosus | 6.03e-07 | 2 |
fibrocartilage | 6.03e-07 | 2 |
annulus fibrosus disci intervertebralis | 6.03e-07 | 2 |
mesenchyme | 8.01e-07 | 160 |
entire embryonic mesenchyme | 8.01e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.