FFCP PHASE1:Hg19::chr12:3324464..3324485,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10867|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21640|TSSclassifier=S|UniProt=|association_with_transcript=47bp_to_ENST00000431374_5end|coexpression_cluster_id=C194|description=CAGE_peak_4_at_TSPAN9_5end|id=chr12:3324464..3324485,+|ontology_enrichment_celltype=CL:0002274!3.74e-09!5;CL:0000457!3.74e-09!5;CL:0002191!3.74e-09!5;CL:0000097!3.74e-09!5;CL:0000831!3.74e-09!5;CL:0002028!3.74e-09!5|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1|ontology_enrichment_disease=DOID:5093!4.12e-43!4;DOID:1612!4.12e-43!4;DOID:630!7.76e-12!1;DOID:0050177!7.76e-12!1;DOID:0050427!7.76e-12!1;DOID:7!8.78e-07!39|ontology_enrichment_disease_v019=DOID:5093;6.94e-147;4!DOID:1612;6.94e-147;4!DOID:7;1.28e-13;39!DOID:299;1.15e-11;25|ontology_enrichment_disease_v019_2=DOID:5093,6.94e-147,4;DOID:1612,6.94e-147,4;DOID:7,2.93e-16,39;DOID:299,1.15e-11,25|ontology_enrichment_uberon=UBERON:0003127!1.26e-21!2;UBERON:0000310!1.85e-17!10;UBERON:0001443!6.76e-16!11;UBERON:0002372!3.65e-12!1;UBERON:0001961!3.65e-12!1;UBERON:0001744!3.65e-12!1;UBERON:0001735!3.65e-12!1;UBERON:0000915!2.49e-09!52;UBERON:0006562!3.24e-09!11;UBERON:0003126!7.86e-07!7;UBERON:0001005!7.86e-07!7|ontology_enrichment_uberon_v019=UBERON:0000310;1.10e-59;10!UBERON:0001443;2.16e-54;11!UBERON:0001911;7.35e-18;4!UBERON:0000915;8.34e-14;52|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.10e-59,10;UBERON:0001443,2.16e-54,11;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000915,1.77e-12,52;UBERON:0000076,1.24e-09,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74122638775565,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,5.59743999975653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p4@TSPAN9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21640 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000431374_5end | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_4_at_TSPAN9_5end | |||
|id=chr12:3324464..3324485,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.74e-09!5;CL:0000457!3.74e-09!5;CL:0002191!3.74e-09!5;CL:0000097!3.74e-09!5;CL:0000831!3.74e-09!5;CL:0002028!3.74e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1 | |||
|ontology_enrichment_disease=DOID:5093!4.12e-43!4;DOID:1612!4.12e-43!4;DOID:630!7.76e-12!1;DOID:0050177!7.76e-12!1;DOID:0050427!7.76e-12!1;DOID:7!8.78e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.94e-147;4!DOID:1612;6.94e-147;4!DOID:7;1.28e-13;39!DOID:299;1.15e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.94e-147,4;DOID:1612,6.94e-147,4;DOID:7,2.93e-16,39;DOID:299,1.15e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.26e-21!2;UBERON:0000310!1.85e-17!10;UBERON:0001443!6.76e-16!11;UBERON:0002372!3.65e-12!1;UBERON:0001961!3.65e-12!1;UBERON:0001744!3.65e-12!1;UBERON:0001735!3.65e-12!1;UBERON:0000915!2.49e-09!52;UBERON:0006562!3.24e-09!11;UBERON:0003126!7.86e-07!7;UBERON:0001005!7.86e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.10e-59;10!UBERON:0001443;2.16e-54;11!UBERON:0001911;7.35e-18;4!UBERON:0000915;8.34e-14;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.10e-59,10;UBERON:0001443,2.16e-54,11;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000915,1.77e-12,52;UBERON:0000076,1.24e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74122638775565,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,5.59743999975653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p4@TSPAN9 | |||
}} |
Revision as of 22:30, 10 September 2013
Short description: | p4@TSPAN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TSPAN9_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 47bp_to_ENST00000431374_5end |
EntrezGene: | TSPAN9 |
HGNC: | 21640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 1.10e-59 | 10 |
chest | 2.16e-54 | 11 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
thoracic segment of trunk | 1.77e-12 | 52 |
external ectoderm | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.94e-147 | 4 |
breast cancer | 6.94e-147 | 4 |
disease of anatomical entity | 2.93e-16 | 39 |
adenocarcinoma | 1.15e-11 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.