FFCP PHASE1:Hg19::chr14:38678295..38678312,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6751|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11330|TSSclassifier=S|UniProt=|association_with_transcript=14bp_to_uc010amu.1_5end|description=CAGE_peak_1_at_SSTR1_5end|id=chr14:38678295..38678312,+|ontology_enrichment_celltype=CL:0000057!6.71e-12!75;CL:0002620!2.17e-10!23;CL:0000055!5.33e-10!180;CL:0000192!8.37e-10!42;CL:0000514!8.37e-10!42;CL:0000680!1.98e-08!57;CL:0000056!1.98e-08!57;CL:0000355!1.98e-08!57;CL:0000359!3.21e-08!32;CL:0000183!2.65e-07!59;CL:0000187!2.97e-07!54|ontology_enrichment_celltype_v019=CL:0002620;1.48e-11;23!CL:0000359;6.76e-08;32!CL:0000192;9.96e-08;43|ontology_enrichment_celltype_v019_2=CL:0002620,1.21e-11,23;CL:0000192,1.20e-09,43;CL:0000514,1.20e-09,43;CL:0000057,1.29e-09,76;CL:0000359,2.12e-08,32;CL:0000680,1.22e-07,58;CL:0000056,1.22e-07,58;CL:0000355,1.22e-07,58|ontology_enrichment_development_v019=CL:0000514;9.96e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;3.50e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,3.82e-07,14|ontology_enrichment_uberon=UBERON:0007023!1.01e-12!115;UBERON:0000025!1.93e-12!194;UBERON:0000477!1.79e-11!286;UBERON:0004111!4.18e-11!241;UBERON:0000475!4.41e-10!365;UBERON:0000481!6.22e-10!347;UBERON:0000468!1.14e-09!659;UBERON:0004290!4.59e-09!70;UBERON:0005256!4.81e-09!143;UBERON:0000483!9.09e-09!309;UBERON:0002385!1.10e-08!63;UBERON:0001015!1.10e-08!63;UBERON:0000383!1.10e-08!63;UBERON:0001637!2.33e-08!42;UBERON:0003509!2.33e-08!42;UBERON:0004572!2.33e-08!42;UBERON:0000119!2.58e-08!312;UBERON:0000914!3.29e-08!83;UBERON:0002329!3.29e-08!83;UBERON:0003077!3.29e-08!83;UBERON:0003059!3.29e-08!83;UBERON:0007282!3.29e-08!83;UBERON:0009618!3.29e-08!83;UBERON:0007285!3.29e-08!83;UBERON:0001134!4.77e-08!61;UBERON:0002036!4.77e-08!61;UBERON:0003082!4.77e-08!61;UBERON:0002619!5.87e-08!22;UBERON:0001049!6.25e-08!57;UBERON:0005068!6.25e-08!57;UBERON:0006241!6.25e-08!57;UBERON:0007135!6.25e-08!57;UBERON:0001981!7.99e-08!60;UBERON:0007500!7.99e-08!60;UBERON:0004537!7.99e-08!60;UBERON:0006965!7.99e-08!60;UBERON:0001950!1.88e-07!20;UBERON:0000055!2.11e-07!69;UBERON:0004872!2.16e-07!84;UBERON:0001893!3.05e-07!34;UBERON:0003080!3.65e-07!42;UBERON:0002020!4.28e-07!34;UBERON:0003528!4.28e-07!34;UBERON:0002780!4.99e-07!41;UBERON:0001890!4.99e-07!41;UBERON:0006240!4.99e-07!41;UBERON:0001869!6.02e-07!32;UBERON:0003914!6.31e-07!118;UBERON:0003104!6.31e-07!238;UBERON:0009142!6.31e-07!238;UBERON:0002791!7.06e-07!33|ontology_enrichment_uberon_v019=UBERON:0001737;5.62e-08;9!UBERON:0001557;5.62e-08;9!UBERON:0001950;4.19e-07;20!UBERON:0002619;5.35e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.31e-08,78;UBERON:0003077,4.59e-08,72;UBERON:0007285,4.59e-08,72;UBERON:0001737,4.99e-08,9;UBERON:0007524,8.29e-08,73;UBERON:0002385,8.55e-08,64;UBERON:0001015,8.55e-08,64;UBERON:0000383,8.55e-08,64;UBERON:0002329,1.09e-07,71;UBERON:0003059,1.09e-07,71;UBERON:0007282,1.09e-07,71;UBERON:0004290,1.09e-07,71;UBERON:0009618,1.09e-07,71;UBERON:0001950,3.66e-07,20;UBERON:0001637,3.85e-07,42;UBERON:0003509,3.85e-07,42;UBERON:0004572,3.85e-07,42;UBERON:0002619,4.37e-07,22;UBERON:0001134,4.38e-07,62;UBERON:0002036,4.38e-07,62;UBERON:0003082,4.38e-07,62;UBERON:0005256,5.03e-07,122;UBERON:0007023,6.53e-07,114|phase1_expression=6.7221000330106,3.42560838225573,6.48390258841467,6.00439790118782,0,2.61701557230111,0,0,0,1.96587149201207,0,0,0,0.123766352960047,0.662794751455832,0,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,4.84622579341537,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,2.13459757612026,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,1.49091585508596,1.64619665163954,15.2270557935202,2.29469296599051,1.77334191099179,1.68203280042692,0,0,0.622422070799533,2.15537075311501,0.653847612453835,0,0,0.937285727335186,0,0,0.448346041655403,1.40921398372518,1.61872944368132,0.842704840213491,0.204154171254893,0,0,0,0,8.19145225744224,15.8095991199572,0,0.125118519871964,0.831192346452549,2.63386572528503,0,0.751190294532984,1.81491493056034,20.0916391971525,10.2507546632912,40.6909250226359,81.0245959427886,26.8967101312326,80.8991295743276,119.114788052217,43.5442937182467,17.8309719444993,28.2725827153408,29.1798178696089,2.42469085228218,72.7769664659059,47.051229872308,54.0898289470456,0,0,0,0.365921118388786,0,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,1.56449532329816,10.935095949279,4.14404764057442,0,0,5.56041960187266,6.74338760312407,6.50729780685401,6.61763836394364,7.62578054323422,10.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11330 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_uc010amu.1_5end | |||
|description=CAGE_peak_1_at_SSTR1_5end | |||
|id=chr14:38678295..38678312,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.71e-12!75;CL:0002620!2.17e-10!23;CL:0000055!5.33e-10!180;CL:0000192!8.37e-10!42;CL:0000514!8.37e-10!42;CL:0000680!1.98e-08!57;CL:0000056!1.98e-08!57;CL:0000355!1.98e-08!57;CL:0000359!3.21e-08!32;CL:0000183!2.65e-07!59;CL:0000187!2.97e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.48e-11;23!CL:0000359;6.76e-08;32!CL:0000192;9.96e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.21e-11,23;CL:0000192,1.20e-09,43;CL:0000514,1.20e-09,43;CL:0000057,1.29e-09,76;CL:0000359,2.12e-08,32;CL:0000680,1.22e-07,58;CL:0000056,1.22e-07,58;CL:0000355,1.22e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;9.96e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.82e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-12!115;UBERON:0000025!1.93e-12!194;UBERON:0000477!1.79e-11!286;UBERON:0004111!4.18e-11!241;UBERON:0000475!4.41e-10!365;UBERON:0000481!6.22e-10!347;UBERON:0000468!1.14e-09!659;UBERON:0004290!4.59e-09!70;UBERON:0005256!4.81e-09!143;UBERON:0000483!9.09e-09!309;UBERON:0002385!1.10e-08!63;UBERON:0001015!1.10e-08!63;UBERON:0000383!1.10e-08!63;UBERON:0001637!2.33e-08!42;UBERON:0003509!2.33e-08!42;UBERON:0004572!2.33e-08!42;UBERON:0000119!2.58e-08!312;UBERON:0000914!3.29e-08!83;UBERON:0002329!3.29e-08!83;UBERON:0003077!3.29e-08!83;UBERON:0003059!3.29e-08!83;UBERON:0007282!3.29e-08!83;UBERON:0009618!3.29e-08!83;UBERON:0007285!3.29e-08!83;UBERON:0001134!4.77e-08!61;UBERON:0002036!4.77e-08!61;UBERON:0003082!4.77e-08!61;UBERON:0002619!5.87e-08!22;UBERON:0001049!6.25e-08!57;UBERON:0005068!6.25e-08!57;UBERON:0006241!6.25e-08!57;UBERON:0007135!6.25e-08!57;UBERON:0001981!7.99e-08!60;UBERON:0007500!7.99e-08!60;UBERON:0004537!7.99e-08!60;UBERON:0006965!7.99e-08!60;UBERON:0001950!1.88e-07!20;UBERON:0000055!2.11e-07!69;UBERON:0004872!2.16e-07!84;UBERON:0001893!3.05e-07!34;UBERON:0003080!3.65e-07!42;UBERON:0002020!4.28e-07!34;UBERON:0003528!4.28e-07!34;UBERON:0002780!4.99e-07!41;UBERON:0001890!4.99e-07!41;UBERON:0006240!4.99e-07!41;UBERON:0001869!6.02e-07!32;UBERON:0003914!6.31e-07!118;UBERON:0003104!6.31e-07!238;UBERON:0009142!6.31e-07!238;UBERON:0002791!7.06e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.62e-08;9!UBERON:0001557;5.62e-08;9!UBERON:0001950;4.19e-07;20!UBERON:0002619;5.35e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.31e-08,78;UBERON:0003077,4.59e-08,72;UBERON:0007285,4.59e-08,72;UBERON:0001737,4.99e-08,9;UBERON:0007524,8.29e-08,73;UBERON:0002385,8.55e-08,64;UBERON:0001015,8.55e-08,64;UBERON:0000383,8.55e-08,64;UBERON:0002329,1.09e-07,71;UBERON:0003059,1.09e-07,71;UBERON:0007282,1.09e-07,71;UBERON:0004290,1.09e-07,71;UBERON:0009618,1.09e-07,71;UBERON:0001950,3.66e-07,20;UBERON:0001637,3.85e-07,42;UBERON:0003509,3.85e-07,42;UBERON:0004572,3.85e-07,42;UBERON:0002619,4.37e-07,22;UBERON:0001134,4.38e-07,62;UBERON:0002036,4.38e-07,62;UBERON:0003082,4.38e-07,62;UBERON:0005256,5.03e-07,122;UBERON:0007023,6.53e-07,114 | |||
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| |||
|short_description=p1@SSTR1 | |||
}} |
Revision as of 04:31, 11 September 2013
Short description: | p1@SSTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SSTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_uc010amu.1_5end |
EntrezGene: | SSTR1 |
HGNC: | 11330 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.21e-11 | 23 |
smooth muscle cell | 1.20e-09 | 43 |
smooth muscle myoblast | 1.20e-09 | 43 |
fibroblast | 1.29e-09 | 76 |
vascular associated smooth muscle cell | 2.12e-08 | 32 |
muscle precursor cell | 1.22e-07 | 58 |
myoblast | 1.22e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.31e-08 | 78 |
paraxial mesoderm | 4.59e-08 | 72 |
presumptive paraxial mesoderm | 4.59e-08 | 72 |
larynx | 4.99e-08 | 9 |
dense mesenchyme tissue | 8.29e-08 | 73 |
muscle tissue | 8.55e-08 | 64 |
musculature | 8.55e-08 | 64 |
musculature of body | 8.55e-08 | 64 |
somite | 1.09e-07 | 71 |
presomitic mesoderm | 1.09e-07 | 71 |
presumptive segmental plate | 1.09e-07 | 71 |
dermomyotome | 1.09e-07 | 71 |
trunk paraxial mesoderm | 1.09e-07 | 71 |
neocortex | 3.66e-07 | 20 |
artery | 3.85e-07 | 42 |
arterial blood vessel | 3.85e-07 | 42 |
arterial system | 3.85e-07 | 42 |
regional part of cerebral cortex | 4.37e-07 | 22 |
skeletal muscle tissue | 4.38e-07 | 62 |
striated muscle tissue | 4.38e-07 | 62 |
myotome | 4.38e-07 | 62 |
trunk mesenchyme | 5.03e-07 | 122 |
adult organism | 6.53e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.82e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.