FFCP PHASE1:Hg19::chr16:15829348..15829359,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C48|description=CAGE_peak_at_chr16:15829348..15829359,-|id=chr16:15829348..15829359,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;3.12e-23;2!UBERON:0006965;5.17e-23;2!UBERON:0005754;7.88e-13;1!UBERON:0004874;9.37e-13;1!UBERON:0009143;1.32e-12;1!UBERON:0006242;1.96e-12;1!UBERON:0006603;2.11e-11;65!UBERON:0004872;3.10e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.90e-42!115;UBERON:0006947!1.42e-13!3;UBERON:0004054!1.42e-13!3;UBERON:0003135!2.17e-13!11;UBERON:0005904!2.76e-10!4;UBERON:0005409!3.07e-09!35;UBERON:0004921!1.43e-08!129;UBERON:0004185!1.43e-08!129;UBERON:0003101!1.63e-08!22;UBERON:0000079!1.63e-08!22;UBERON:0003133!3.12e-08!48;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0004119!8.50e-08!169;UBERON:0000925!8.50e-08!169;UBERON:0006595!8.50e-08!169;UBERON:0005156!1.33e-07!59;UBERON:0000990!1.33e-07!59;UBERON:0004175!2.89e-07!25;UBERON:0000464!3.63e-07!104;UBERON:0000062!8.97e-07!511|ontology_enrichment_uberon_v019=UBERON:0006947;7.56e-34;3!UBERON:0004054;7.56e-34;3!UBERON:0005904;1.42e-25;4!UBERON:0003135;3.85e-25;11!UBERON:0004175;1.29e-18;21!UBERON:0003101;9.90e-18;22!UBERON:0000079;9.90e-18;22!UBERON:0000998;7.88e-13;1!UBERON:0006868;7.88e-13;1!UBERON:0000989;9.37e-13;1!UBERON:0008811;9.37e-13;1!UBERON:0000996;1.32e-12;1!UBERON:0006834;1.96e-12;1!UBERON:0001000;1.96e-12;1!UBERON:0005352;1.96e-12;1!UBERON:0001301;3.44e-12;1!UBERON:0000058;1.33e-10;10!UBERON:0003133;3.39e-10;44!UBERON:0005156;1.48e-07;59!UBERON:0000990;1.48e-07;59!UBERON:0001255;5.26e-07;2!UBERON:0001556;5.26e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.46e-34,3;UBERON:0004054,8.46e-34,3;UBERON:0005904,1.54e-25,4;UBERON:0003135,4.15e-25,11;UBERON:0007023,7.62e-20,114;UBERON:0003101,9.48e-18,22;UBERON:0000079,9.48e-18,22;UBERON:0004175,1.36e-15,25;UBERON:0005156,4.54e-14,59;UBERON:0000990,4.54e-14,59;UBERON:0003064,4.88e-14,28;UBERON:0003133,6.97e-14,48;UBERON:0000998,7.89e-13,1;UBERON:0006868,7.89e-13,1;UBERON:0000989,8.85e-13,1;UBERON:0008811,8.85e-13,1;UBERON:0006258,8.85e-13,1;UBERON:0005876,8.85e-13,1;UBERON:0004874,8.85e-13,1;UBERON:0000996,1.11e-12,1;UBERON:0001000,1.75e-12,1;UBERON:0005352,1.75e-12,1;UBERON:0006834,2.20e-12,1;UBERON:0001301,4.31e-12,1;UBERON:0004876,9.40e-10,11;UBERON:0000162,8.82e-08,14;UBERON:0001353,8.82e-08,14;UBERON:0000163,8.82e-08,14;UBERON:0006866,8.82e-08,14;UBERON:0000164,8.82e-08,14;UBERON:0000931,8.82e-08,14;UBERON:0004122,2.71e-07,15;UBERON:0001255,5.41e-07,2;UBERON:0001556,5.41e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,0.276283915531148,0,0,0,0,0,0,0,6.60910817767455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,0,0,2.76209081994573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,3.10364852762942,0,0.451961481561065,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,6.94695649745012,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,1.72684804271131,0,0,0.913158720509496,0,0,0.571812353413251,0,0,0,0,0,0,0,0.860454717640555,0,0,8.46774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,14.2186026617265,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.682008283964155,1.07185652062471,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,2.07810455110873,0,3.99454064511308,1.00636896795513,0|short_description=p@chr16:15829348..15829359,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr16:15829348..15829359,- | |||
|id=chr16:15829348..15829359,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.12e-23;2!UBERON:0006965;5.17e-23;2!UBERON:0005754;7.88e-13;1!UBERON:0004874;9.37e-13;1!UBERON:0009143;1.32e-12;1!UBERON:0006242;1.96e-12;1!UBERON:0006603;2.11e-11;65!UBERON:0004872;3.10e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.90e-42!115;UBERON:0006947!1.42e-13!3;UBERON:0004054!1.42e-13!3;UBERON:0003135!2.17e-13!11;UBERON:0005904!2.76e-10!4;UBERON:0005409!3.07e-09!35;UBERON:0004921!1.43e-08!129;UBERON:0004185!1.43e-08!129;UBERON:0003101!1.63e-08!22;UBERON:0000079!1.63e-08!22;UBERON:0003133!3.12e-08!48;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0004119!8.50e-08!169;UBERON:0000925!8.50e-08!169;UBERON:0006595!8.50e-08!169;UBERON:0005156!1.33e-07!59;UBERON:0000990!1.33e-07!59;UBERON:0004175!2.89e-07!25;UBERON:0000464!3.63e-07!104;UBERON:0000062!8.97e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.56e-34;3!UBERON:0004054;7.56e-34;3!UBERON:0005904;1.42e-25;4!UBERON:0003135;3.85e-25;11!UBERON:0004175;1.29e-18;21!UBERON:0003101;9.90e-18;22!UBERON:0000079;9.90e-18;22!UBERON:0000998;7.88e-13;1!UBERON:0006868;7.88e-13;1!UBERON:0000989;9.37e-13;1!UBERON:0008811;9.37e-13;1!UBERON:0000996;1.32e-12;1!UBERON:0006834;1.96e-12;1!UBERON:0001000;1.96e-12;1!UBERON:0005352;1.96e-12;1!UBERON:0001301;3.44e-12;1!UBERON:0000058;1.33e-10;10!UBERON:0003133;3.39e-10;44!UBERON:0005156;1.48e-07;59!UBERON:0000990;1.48e-07;59!UBERON:0001255;5.26e-07;2!UBERON:0001556;5.26e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.46e-34,3;UBERON:0004054,8.46e-34,3;UBERON:0005904,1.54e-25,4;UBERON:0003135,4.15e-25,11;UBERON:0007023,7.62e-20,114;UBERON:0003101,9.48e-18,22;UBERON:0000079,9.48e-18,22;UBERON:0004175,1.36e-15,25;UBERON:0005156,4.54e-14,59;UBERON:0000990,4.54e-14,59;UBERON:0003064,4.88e-14,28;UBERON:0003133,6.97e-14,48;UBERON:0000998,7.89e-13,1;UBERON:0006868,7.89e-13,1;UBERON:0000989,8.85e-13,1;UBERON:0008811,8.85e-13,1;UBERON:0006258,8.85e-13,1;UBERON:0005876,8.85e-13,1;UBERON:0004874,8.85e-13,1;UBERON:0000996,1.11e-12,1;UBERON:0001000,1.75e-12,1;UBERON:0005352,1.75e-12,1;UBERON:0006834,2.20e-12,1;UBERON:0001301,4.31e-12,1;UBERON:0004876,9.40e-10,11;UBERON:0000162,8.82e-08,14;UBERON:0001353,8.82e-08,14;UBERON:0000163,8.82e-08,14;UBERON:0006866,8.82e-08,14;UBERON:0000164,8.82e-08,14;UBERON:0000931,8.82e-08,14;UBERON:0004122,2.71e-07,15;UBERON:0001255,5.41e-07,2;UBERON:0001556,5.41e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,0.276283915531148,0,0,0,0,0,0,0,6.60910817767455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,0,0,2.76209081994573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,3.10364852762942,0,0.451961481561065,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,6.94695649745012,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,1.72684804271131,0,0,0.913158720509496,0,0,0.571812353413251,0,0,0,0,0,0,0,0.860454717640555,0,0,8.46774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,14.2186026617265,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.682008283964155,1.07185652062471,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,2.07810455110873,0,3.99454064511308,1.00636896795513,0 | |||
|short_description=p@chr16:15829348..15829359,- | |||
}} |
Revision as of 09:24, 11 September 2013
Short description: | p@chr16:15829348..15829359, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:15829348..15829359, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.46e-34 | 3 |
internal male genitalia | 8.46e-34 | 3 |
duct of male reproductive system | 1.54e-25 | 4 |
male reproductive organ | 4.15e-25 | 11 |
adult organism | 7.62e-20 | 114 |
male organism | 9.48e-18 | 22 |
male reproductive system | 9.48e-18 | 22 |
internal genitalia | 1.36e-15 | 25 |
reproductive structure | 4.54e-14 | 59 |
reproductive system | 4.54e-14 | 59 |
intermediate mesoderm | 4.88e-14 | 28 |
reproductive organ | 6.97e-14 | 48 |
seminal vesicle | 7.89e-13 | 1 |
seminal fluid secreting gland | 7.89e-13 | 1 |
penis | 8.85e-13 | 1 |
intromittent organ | 8.85e-13 | 1 |
lateral plate mesenchyme | 8.85e-13 | 1 |
undifferentiated genital tubercle | 8.85e-13 | 1 |
somatopleure | 8.85e-13 | 1 |
vagina | 1.11e-12 | 1 |
vas deferens | 1.75e-12 | 1 |
spermatic cord | 1.75e-12 | 1 |
uterus or analog | 2.20e-12 | 1 |
epididymis | 4.31e-12 | 1 |
urogenital ridge | 9.40e-10 | 11 |
cloaca | 8.82e-08 | 14 |
anal region | 8.82e-08 | 14 |
embryonic cloaca | 8.82e-08 | 14 |
terminal part of digestive tract | 8.82e-08 | 14 |
primitive urogenital sinus | 8.82e-08 | 14 |
proctodeum | 8.82e-08 | 14 |
genitourinary system | 2.71e-07 | 15 |
urinary bladder | 5.41e-07 | 2 |
lower urinary tract | 5.41e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.