FFCP PHASE1:Hg19::chr17:4853774..4853785,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:4853774..4853785,-|id=chr17:4853774..4853785,-|ontology_enrichment_celltype=CL:0000860!1.07e-12!45;CL:0000763!6.02e-12!112;CL:0000049!6.02e-12!112;CL:0002057!2.11e-10!42;CL:0000557!3.52e-10!71;CL:0000839!1.08e-09!70;CL:0002032!1.65e-09!165;CL:0000837!1.65e-09!165;CL:0000037!8.52e-09!172;CL:0000566!8.52e-09!172;CL:0000766!9.70e-09!76;CL:0002009!1.51e-08!65;CL:0002194!1.78e-08!63;CL:0000576!1.78e-08!63;CL:0000040!1.78e-08!63;CL:0000559!1.78e-08!63;CL:0000988!3.79e-08!182;CL:0002031!3.84e-07!124|ontology_enrichment_celltype_v019=CL:0000860;1.46e-12;33!CL:0002057;1.46e-12;33!CL:0000473;2.45e-09;39!CL:0000234;2.45e-09;39!CL:0002032;1.77e-08;1!CL:0000222;1.77e-08;1!CL:0000557;1.77e-08;1|ontology_enrichment_celltype_v019_2=CL:0000860,6.87e-10,42;CL:0002057,6.87e-10,42;CL:0000473,1.63e-08,48;CL:0000234,1.63e-08,48;CL:0000763,2.63e-07,108;CL:0000049,2.63e-07,108;CL:0000557,3.47e-07,67|ontology_enrichment_development_v019=CL:0002057;1.59e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!7.37e-13!115;UBERON:0002371!2.01e-10!80;UBERON:0002390!7.76e-10!102;UBERON:0003061!7.76e-10!102;UBERON:0001474!8.75e-09!86;UBERON:0002193!1.37e-08!112;UBERON:0001737!4.47e-08!9;UBERON:0001557!4.87e-07!19|ontology_enrichment_uberon_v019=UBERON:0002107;1.86e-09;19!UBERON:0006925;1.86e-09;19!UBERON:0002423;3.94e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-09,19;UBERON:0006925,1.36e-09,19;UBERON:0008836,1.36e-09,19;UBERON:0008835,2.98e-08,22;UBERON:0003894,2.98e-08,22;UBERON:0009854,6.97e-08,23;UBERON:0007499,3.12e-07,25;UBERON:0009497,3.12e-07,25;UBERON:0000015,3.12e-07,25;UBERON:0002423,3.12e-07,25;UBERON:0006235,3.12e-07,25;UBERON:0004161,3.12e-07,25;UBERON:0009856,6.06e-07,26|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.458480434487708,0.246301768349837,0.236132343941038,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0,0.726991193897824,1.51150377475524,1.4555043671269,0.697287110717054,2.05583944010913,1.23882548358041,0,0.768482119587302,0.945928919554341,0.344745680736619,0,1.35426486594342,0.752969358170419,1.63743690034707,0.898893937780338,0.306083892370903,0,1.27867425159808,0.329851300186716,0.398927315243264,0.852449501065388,0.870627715885752,0,0.622822248995575,1.25624332628372,0,0.434377689410233,0.605399502633369,0.736555271975129,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,1.0647612003586,0.168584690078102,0.482022059766964,0.661763836394364,0.217879444092406,0.71181185733329,0.943819157121151,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,2.53510069643662,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.576479813667846,0.12624243342638,0,0.763976851116555,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0.438519753291869,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,1.07001315444375,0,0,0,0,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0.586164286206121,0,0,1.08182271390393,0.99921590399346,1.4098700508785,0.37428108081644,0,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:4853774..4853785,- | |||
|id=chr17:4853774..4853785,- | |||
|ontology_enrichment_celltype=CL:0000860!1.07e-12!45;CL:0000763!6.02e-12!112;CL:0000049!6.02e-12!112;CL:0002057!2.11e-10!42;CL:0000557!3.52e-10!71;CL:0000839!1.08e-09!70;CL:0002032!1.65e-09!165;CL:0000837!1.65e-09!165;CL:0000037!8.52e-09!172;CL:0000566!8.52e-09!172;CL:0000766!9.70e-09!76;CL:0002009!1.51e-08!65;CL:0002194!1.78e-08!63;CL:0000576!1.78e-08!63;CL:0000040!1.78e-08!63;CL:0000559!1.78e-08!63;CL:0000988!3.79e-08!182;CL:0002031!3.84e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-12;33!CL:0002057;1.46e-12;33!CL:0000473;2.45e-09;39!CL:0000234;2.45e-09;39!CL:0002032;1.77e-08;1!CL:0000222;1.77e-08;1!CL:0000557;1.77e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.87e-10,42;CL:0002057,6.87e-10,42;CL:0000473,1.63e-08,48;CL:0000234,1.63e-08,48;CL:0000763,2.63e-07,108;CL:0000049,2.63e-07,108;CL:0000557,3.47e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.37e-13!115;UBERON:0002371!2.01e-10!80;UBERON:0002390!7.76e-10!102;UBERON:0003061!7.76e-10!102;UBERON:0001474!8.75e-09!86;UBERON:0002193!1.37e-08!112;UBERON:0001737!4.47e-08!9;UBERON:0001557!4.87e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.86e-09;19!UBERON:0006925;1.86e-09;19!UBERON:0002423;3.94e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-09,19;UBERON:0006925,1.36e-09,19;UBERON:0008836,1.36e-09,19;UBERON:0008835,2.98e-08,22;UBERON:0003894,2.98e-08,22;UBERON:0009854,6.97e-08,23;UBERON:0007499,3.12e-07,25;UBERON:0009497,3.12e-07,25;UBERON:0000015,3.12e-07,25;UBERON:0002423,3.12e-07,25;UBERON:0006235,3.12e-07,25;UBERON:0004161,3.12e-07,25;UBERON:0009856,6.06e-07,26 | |||
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| |||
|short_description=p@chr17:4853774..4853785,- | |||
}} |
Revision as of 14:30, 11 September 2013
Short description: | p@chr17:4853774..4853785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:4853774..4853785, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.87e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.87e-10 | 42 |
defensive cell | 1.63e-08 | 48 |
phagocyte | 1.63e-08 | 48 |
myeloid cell | 2.63e-07 | 108 |
common myeloid progenitor | 2.63e-07 | 108 |
granulocyte monocyte progenitor cell | 3.47e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
liver | 1.36e-09 | 19 |
digestive gland | 1.36e-09 | 19 |
liver bud | 1.36e-09 | 19 |
hepatic diverticulum | 2.98e-08 | 22 |
liver primordium | 2.98e-08 | 22 |
digestive tract diverticulum | 6.97e-08 | 23 |
epithelial sac | 3.12e-07 | 25 |
epithelium of foregut-midgut junction | 3.12e-07 | 25 |
anatomical boundary | 3.12e-07 | 25 |
hepatobiliary system | 3.12e-07 | 25 |
foregut-midgut junction | 3.12e-07 | 25 |
septum transversum | 3.12e-07 | 25 |
sac | 6.06e-07 | 26 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.