FFCP PHASE1:Hg19::chr17:63556446..63556459,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8313|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=904|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_uc002jfj.1_5end|coexpression_cluster_id=C2429|description=CAGE_peak_3_at_AXIN2_5end|id=chr17:63556446..63556459,-|ontology_enrichment_celltype=CL:0000791!9.95e-08!18;CL:0000789!9.95e-08!18;CL:0002420!9.95e-08!18;CL:0002419!9.95e-08!18;CL:0000790!9.95e-08!18|ontology_enrichment_celltype_v019=CL:0002322;3.45e-12;5!CL:0000791;1.53e-07;18!CL:0000789;1.53e-07;18!CL:0002419;1.53e-07;18!CL:0000039;1.89e-07;7!CL:0000586;1.89e-07;7|ontology_enrichment_celltype_v019_2=CL:0002322,3.60e-12,5;CL:0000791,1.24e-07,18;CL:0000789,1.24e-07,18;CL:0002420,1.24e-07,18;CL:0002419,1.24e-07,18;CL:0000790,1.24e-07,18;CL:0000039,1.65e-07,7;CL:0000586,1.65e-07,7|ontology_enrichment_development_v019=CL:0000790;1.53e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;2.06e-09;14|ontology_enrichment_disease_v019_2=DOID:3119,1.44e-09,14|ontology_enrichment_uberon=UBERON:0007023!7.73e-10!115;UBERON:0005409!6.17e-07!35|ontology_enrichment_uberon_v019=UBERON:0000922;7.56e-10;49|ontology_enrichment_uberon_v019_2=|phase1_expression=0.726713517082227,0.856402095563933,1.12763523276777,0,1.34088328328186,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.984968464614303,1.02000345622126,1.25381888591235,0,0.410623275218653,0,0.229240217243854,0.0821005894499457,0.157421562627358,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.52909291250092,0,0,0,1.57367816091066,0.786021525498329,2.2616164889946,0,0.977766799900771,0,3.89653456815823,0.111410456885174,0.294605907474837,0,0,0,0,0.164437904603676,1.10540007114339,0,1.92772532110679,1.60524496853828,1.04535523804977,0.339928028092699,1.53288197440768,0.68725489096526,1.26509846009751,1.27426165729639,1.95325036156926,2.85135613334512,1.35517607169996,1.02389288923535,1.24930726552346,0.947109008176067,0,0.201606743224732,0.267440195783507,0.434473211648397,0,1.34140171940727,0.767175371061182,0.722878304769133,0,0.144846518960824,0.795285947051099,2.91980922181582,0.0945348171640679,0,0.263504357079378,1.30979075497713,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0.622422070799533,0,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0.647491777472526,0.561803226808994,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0,0,0.30648779579902,0,0,0.358779271377724,0.213557388818567,0.423863802319124,0,0.206105058476878,0.515281080091258,0.37223371266318,0.337552664482532,0.194874010322397,0,0.184099797284599,1.45481451136931,0.710019185033229,0.201504196455281,0,0,0,0,3.29329006549908,4.5060121229305,2.67246068599892,4.14644220061482,4.03713361401005,1.09493207722749,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,2.20731549707325,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.672786506072164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,1.18218456121156,0.215627574859517,0.256686072559497,0,1.30139853857622,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,1.71571711905428,0.620304078368662,0.647142602455851,0.640365346820666,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.164254312027618,0,0.116210378459959,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,2.26016233240486,1.10273068709225,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,1.05553817648832,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,27.5612062402221,0.23874448473769,0.890894042497916,0,0,0.140669416410513,0.222617410045812,0,0,1.59398390600856,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.690503839458535,0,0,0,0,3.99227596002388,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,1.00035336054936,0,1.152819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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=904 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_uc002jfj.1_5end | |||
|coexpression_cluster_id=C2429 | |||
|description=CAGE_peak_3_at_AXIN2_5end | |||
|id=chr17:63556446..63556459,- | |||
|ontology_enrichment_celltype=CL:0000791!9.95e-08!18;CL:0000789!9.95e-08!18;CL:0002420!9.95e-08!18;CL:0002419!9.95e-08!18;CL:0000790!9.95e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.45e-12;5!CL:0000791;1.53e-07;18!CL:0000789;1.53e-07;18!CL:0002419;1.53e-07;18!CL:0000039;1.89e-07;7!CL:0000586;1.89e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.60e-12,5;CL:0000791,1.24e-07,18;CL:0000789,1.24e-07,18;CL:0002420,1.24e-07,18;CL:0002419,1.24e-07,18;CL:0000790,1.24e-07,18;CL:0000039,1.65e-07,7;CL:0000586,1.65e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000790;1.53e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.06e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.44e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.73e-10!115;UBERON:0005409!6.17e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.56e-10;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@AXIN2 | |||
}} |
Revision as of 15:06, 11 September 2013
Short description: | p3@AXIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AXIN2_5end |
Coexpression cluster: | C2429_alveolar_synovial_gastric_signet_hepatoblastoma_small_colon |
Association with transcript: | -2bp_to_uc002jfj.1_5end |
EntrezGene: | AXIN2 |
HGNC: | 904 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.60e-12 | 5 |
mature alpha-beta T cell | 1.24e-07 | 18 |
alpha-beta T cell | 1.24e-07 | 18 |
immature T cell | 1.24e-07 | 18 |
mature T cell | 1.24e-07 | 18 |
immature alpha-beta T cell | 1.24e-07 | 18 |
germ line cell | 1.65e-07 | 7 |
germ cell | 1.65e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.44e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.