FFCP PHASE1:Hg19::chr19:11660779..11660792,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C48|description=CAGE_peak_at_chr19:11660779..11660792,+|id=chr19:11660779..11660792,+|ontology_enrichment_celltype=CL:0002334!2.73e-08!12|ontology_enrichment_celltype_v019=CL:0000136;2.98e-08;13!CL:0002581;1.14e-07;1!CL:0002616;1.14e-07;1|ontology_enrichment_celltype_v019_2=CL:0002616,7.45e-08,1;CL:0002581,1.11e-07,1;CL:0000136,3.21e-07,15|ontology_enrichment_development_v019=UBERON:0006965;5.08e-14;2!UBERON:0007297;5.08e-14;2!UBERON:0004874;2.99e-08;1!UBERON:0009143;4.81e-08;1!UBERON:0006242;4.81e-08;1!UBERON:0005754;4.81e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;1.14e-07;1|ontology_enrichment_disease_v019_2=DOID:2513,1.26e-07,1|ontology_enrichment_uberon=UBERON:0007023!6.97e-09!115;UBERON:0006947!5.16e-07!3;UBERON:0004054!5.16e-07!3|ontology_enrichment_uberon_v019=UBERON:0006947;2.51e-20;3!UBERON:0004054;2.51e-20;3!UBERON:0005904;2.16e-15;4!UBERON:0005406;1.19e-13;2!UBERON:0003135;7.29e-10;11!UBERON:0000160;7.33e-09;17!UBERON:0000989;2.99e-08;1!UBERON:0008811;2.99e-08;1!UBERON:0005795;4.81e-08;1!UBERON:0001000;4.81e-08;1!UBERON:0000998;4.81e-08;1!UBERON:0006868;4.81e-08;1!UBERON:0005352;4.81e-08;1!UBERON:0001301;1.14e-07;1!UBERON:0003101;2.69e-07;22!UBERON:0000079;2.69e-07;22!UBERON:0005409;6.97e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.88e-20,3;UBERON:0004054,1.88e-20,3;UBERON:0005904,1.74e-15,4;UBERON:0005406,7.55e-14,2;UBERON:0003135,6.50e-10,11;UBERON:0000160,6.46e-09,17;UBERON:0000989,2.89e-08,1;UBERON:0008811,2.89e-08,1;UBERON:0006258,2.89e-08,1;UBERON:0005876,2.89e-08,1;UBERON:0004874,2.89e-08,1;UBERON:0001000,4.99e-08,1;UBERON:0005352,4.99e-08,1;UBERON:0000998,6.10e-08,1;UBERON:0006868,6.10e-08,1;UBERON:0001301,6.52e-08,1;UBERON:0003101,2.79e-07,22;UBERON:0000079,2.79e-07,22;UBERON:0007023,2.99e-07,114|phase1_expression=0.181678379270557,1.71280419112787,0.704772020479856,0,2.23480547213644,1.74467704820074,7.59899634504932,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0.389748020644795,0.252433774244115,0.184099797284599,0,0,0.604512589365842,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,1.68396056659844,0.256278298511402,0,0.804269605718038,1.48418066444991,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98871982376605,0.828851746593443,0,0,0,1.24415835064723,0,0,0,4.04437963111428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.923403102045565,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.265372693510018,4.27721101453538,0,0,0,0,0,0.234264445725339,0,0,0,2.36750641709634,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.13375836274523,0,0.451961481561065,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0.199679000498991,1.71690419254628,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr19:11660779..11660792,+ | |||
|id=chr19:11660779..11660792,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.73e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.98e-08;13!CL:0002581;1.14e-07;1!CL:0002616;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,7.45e-08,1;CL:0002581,1.11e-07,1;CL:0000136,3.21e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006965;5.08e-14;2!UBERON:0007297;5.08e-14;2!UBERON:0004874;2.99e-08;1!UBERON:0009143;4.81e-08;1!UBERON:0006242;4.81e-08;1!UBERON:0005754;4.81e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.97e-09!115;UBERON:0006947!5.16e-07!3;UBERON:0004054!5.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.51e-20;3!UBERON:0004054;2.51e-20;3!UBERON:0005904;2.16e-15;4!UBERON:0005406;1.19e-13;2!UBERON:0003135;7.29e-10;11!UBERON:0000160;7.33e-09;17!UBERON:0000989;2.99e-08;1!UBERON:0008811;2.99e-08;1!UBERON:0005795;4.81e-08;1!UBERON:0001000;4.81e-08;1!UBERON:0000998;4.81e-08;1!UBERON:0006868;4.81e-08;1!UBERON:0005352;4.81e-08;1!UBERON:0001301;1.14e-07;1!UBERON:0003101;2.69e-07;22!UBERON:0000079;2.69e-07;22!UBERON:0005409;6.97e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.88e-20,3;UBERON:0004054,1.88e-20,3;UBERON:0005904,1.74e-15,4;UBERON:0005406,7.55e-14,2;UBERON:0003135,6.50e-10,11;UBERON:0000160,6.46e-09,17;UBERON:0000989,2.89e-08,1;UBERON:0008811,2.89e-08,1;UBERON:0006258,2.89e-08,1;UBERON:0005876,2.89e-08,1;UBERON:0004874,2.89e-08,1;UBERON:0001000,4.99e-08,1;UBERON:0005352,4.99e-08,1;UBERON:0000998,6.10e-08,1;UBERON:0006868,6.10e-08,1;UBERON:0001301,6.52e-08,1;UBERON:0003101,2.79e-07,22;UBERON:0000079,2.79e-07,22;UBERON:0007023,2.99e-07,114 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0.704772020479856,0,2.23480547213644,1.74467704820074,7.59899634504932,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0.389748020644795,0.252433774244115,0.184099797284599,0,0,0.604512589365842,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,1.68396056659844,0.256278298511402,0,0.804269605718038,1.48418066444991,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98871982376605,0.828851746593443,0,0,0,1.24415835064723,0,0,0,4.04437963111428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.923403102045565,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.265372693510018,4.27721101453538,0,0,0,0,0,0.234264445725339,0,0,0,2.36750641709634,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.13375836274523,0,0.451961481561065,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0.199679000498991,1.71690419254628,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,7.93937885422871,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,1.02041020705668,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,1.09279780251979,0,12.7477127312031,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.5870805215462,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.733448665097199,2.84827324821017,0,1.00636896795513,0 | |||
|short_description=p@chr19:11660779..11660792,+ | |||
}} |
Revision as of 18:42, 11 September 2013
Short description: | p@chr19:11660779..11660792, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:11660779..11660792, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 7.45e-08 | 1 |
perirenal preadipocyte | 1.11e-07 | 1 |
fat cell | 3.21e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.88e-20 | 3 |
internal male genitalia | 1.88e-20 | 3 |
duct of male reproductive system | 1.74e-15 | 4 |
perirenal fat | 7.55e-14 | 2 |
male reproductive organ | 6.50e-10 | 11 |
intestine | 6.46e-09 | 17 |
penis | 2.89e-08 | 1 |
intromittent organ | 2.89e-08 | 1 |
lateral plate mesenchyme | 2.89e-08 | 1 |
undifferentiated genital tubercle | 2.89e-08 | 1 |
somatopleure | 2.89e-08 | 1 |
vas deferens | 4.99e-08 | 1 |
spermatic cord | 4.99e-08 | 1 |
seminal vesicle | 6.10e-08 | 1 |
seminal fluid secreting gland | 6.10e-08 | 1 |
epididymis | 6.52e-08 | 1 |
male organism | 2.79e-07 | 22 |
male reproductive system | 2.79e-07 | 22 |
adult organism | 2.99e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.26e-07 | 1 |
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