FFCP PHASE1:Hg19::chr19:45116905..45116919,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147710|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=40040|TSSclassifier=S|UniProt=A1L1A6|association_with_transcript=-20bp_to_ENST00000402988,NM_001205280_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_IGSF23_5end|id=chr19:45116905..45116919,+|ontology_enrichment_celltype=CL:0000181!4.51e-13!12;CL:0000417!4.51e-13!12;CL:0000668!4.51e-13!12;CL:0000414!4.51e-13!12;CL:0000412!4.51e-13!12;CL:0000182!4.51e-13!12;CL:0002563!2.05e-10!4;CL:0000223!3.42e-07!59|ontology_enrichment_celltype_v019=CL:0000182;5.35e-13;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.14e-13,12|ontology_enrichment_development_v019=UBERON:0004161;5.17e-14;11!UBERON:0009497;5.88e-12;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.21e-16!27;UBERON:0002107!1.46e-12!19;UBERON:0006925!1.46e-12!19;UBERON:0008836!1.46e-12!19;UBERON:0005409!2.27e-12!35;UBERON:0004921!3.85e-12!129;UBERON:0004185!3.85e-12!129;UBERON:0008835!7.85e-11!22;UBERON:0003894!7.85e-11!22;UBERON:0002365!1.06e-10!31;UBERON:0002330!1.06e-10!31;UBERON:0001831!1.10e-10!1;UBERON:0001567!1.10e-10!1;UBERON:0008801!1.10e-10!1;UBERON:0001242!2.05e-10!4;UBERON:0001262!2.05e-10!4;UBERON:0004786!2.05e-10!4;UBERON:0004808!2.05e-10!4;UBERON:0001277!2.05e-10!4;UBERON:0009854!2.35e-10!23;UBERON:0003929!2.61e-10!54;UBERON:0001155!4.60e-10!9;UBERON:0001007!9.80e-10!155;UBERON:0001555!9.80e-10!155;UBERON:0007026!9.80e-10!155;UBERON:0007499!1.63e-09!25;UBERON:0009497!1.63e-09!25;UBERON:0000015!1.63e-09!25;UBERON:0002423!1.63e-09!25;UBERON:0006235!1.63e-09!25;UBERON:0004161!1.63e-09!25;UBERON:0005057!3.84e-09!26;UBERON:0009856!3.84e-09!26;UBERON:0004119!9.61e-09!169;UBERON:0000925!9.61e-09!169;UBERON:0006595!9.61e-09!169;UBERON:0003350!1.66e-08!5;UBERON:0000059!2.51e-08!11;UBERON:0002530!3.39e-07!59;UBERON:0002368!9.55e-07!35|ontology_enrichment_uberon_v019=UBERON:0002108;1.49e-30;4!UBERON:0000160;4.21e-23;17!UBERON:0005409;4.09e-18;22!UBERON:0002107;3.52e-14;19!UBERON:0006925;3.52e-14;19!UBERON:0002423;7.39e-11;25!UBERON:0004921;1.00e-10;33!UBERON:0001007;3.70e-09;81!UBERON:0002365;4.26e-09;31!UBERON:0002330;4.26e-09;31!UBERON:0002114;9.37e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.34e-30,4;UBERON:0000160,4.42e-23,17;UBERON:0005409,5.03e-16,25;UBERON:0002107,3.34e-14,19;UBERON:0006925,3.34e-14,19;UBERON:0008836,3.34e-14,19;UBERON:0008835,2.59e-12,22;UBERON:0003894,2.59e-12,22;UBERON:0009854,8.59e-12,23;UBERON:0007499,7.11e-11,25;UBERON:0009497,7.11e-11,25;UBERON:0000015,7.11e-11,25;UBERON:0002423,7.11e-11,25;UBERON:0006235,7.11e-11,25;UBERON:0004161,7.11e-11,25;UBERON:0004921,1.45e-10,118;UBERON:0009856,1.81e-10,26;UBERON:0002365,7.96e-09,31;UBERON:0002330,7.96e-09,31;UBERON:0001007,1.82e-08,145;UBERON:0001555,1.82e-08,145;UBERON:0007026,1.82e-08,145;UBERON:0002368,7.59e-08,35;UBERON:0003929,1.12e-07,54;UBERON:0004119,1.33e-07,160;UBERON:0000925,1.33e-07,160;UBERON:0006595,1.33e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,2.74218449960351,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,0.659326867049332,1.3480708770837,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,6.32828096485146,2.18559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@IGSF23}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=147710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40040 | |||
|TSSclassifier=S | |||
|UniProt=A1L1A6 | |||
|association_with_transcript=-20bp_to_ENST00000402988,NM_001205280_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_IGSF23_5end | |||
|id=chr19:45116905..45116919,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.51e-13!12;CL:0000417!4.51e-13!12;CL:0000668!4.51e-13!12;CL:0000414!4.51e-13!12;CL:0000412!4.51e-13!12;CL:0000182!4.51e-13!12;CL:0002563!2.05e-10!4;CL:0000223!3.42e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.35e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.14e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.17e-14;11!UBERON:0009497;5.88e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.21e-16!27;UBERON:0002107!1.46e-12!19;UBERON:0006925!1.46e-12!19;UBERON:0008836!1.46e-12!19;UBERON:0005409!2.27e-12!35;UBERON:0004921!3.85e-12!129;UBERON:0004185!3.85e-12!129;UBERON:0008835!7.85e-11!22;UBERON:0003894!7.85e-11!22;UBERON:0002365!1.06e-10!31;UBERON:0002330!1.06e-10!31;UBERON:0001831!1.10e-10!1;UBERON:0001567!1.10e-10!1;UBERON:0008801!1.10e-10!1;UBERON:0001242!2.05e-10!4;UBERON:0001262!2.05e-10!4;UBERON:0004786!2.05e-10!4;UBERON:0004808!2.05e-10!4;UBERON:0001277!2.05e-10!4;UBERON:0009854!2.35e-10!23;UBERON:0003929!2.61e-10!54;UBERON:0001155!4.60e-10!9;UBERON:0001007!9.80e-10!155;UBERON:0001555!9.80e-10!155;UBERON:0007026!9.80e-10!155;UBERON:0007499!1.63e-09!25;UBERON:0009497!1.63e-09!25;UBERON:0000015!1.63e-09!25;UBERON:0002423!1.63e-09!25;UBERON:0006235!1.63e-09!25;UBERON:0004161!1.63e-09!25;UBERON:0005057!3.84e-09!26;UBERON:0009856!3.84e-09!26;UBERON:0004119!9.61e-09!169;UBERON:0000925!9.61e-09!169;UBERON:0006595!9.61e-09!169;UBERON:0003350!1.66e-08!5;UBERON:0000059!2.51e-08!11;UBERON:0002530!3.39e-07!59;UBERON:0002368!9.55e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.49e-30;4!UBERON:0000160;4.21e-23;17!UBERON:0005409;4.09e-18;22!UBERON:0002107;3.52e-14;19!UBERON:0006925;3.52e-14;19!UBERON:0002423;7.39e-11;25!UBERON:0004921;1.00e-10;33!UBERON:0001007;3.70e-09;81!UBERON:0002365;4.26e-09;31!UBERON:0002330;4.26e-09;31!UBERON:0002114;9.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.34e-30,4;UBERON:0000160,4.42e-23,17;UBERON:0005409,5.03e-16,25;UBERON:0002107,3.34e-14,19;UBERON:0006925,3.34e-14,19;UBERON:0008836,3.34e-14,19;UBERON:0008835,2.59e-12,22;UBERON:0003894,2.59e-12,22;UBERON:0009854,8.59e-12,23;UBERON:0007499,7.11e-11,25;UBERON:0009497,7.11e-11,25;UBERON:0000015,7.11e-11,25;UBERON:0002423,7.11e-11,25;UBERON:0006235,7.11e-11,25;UBERON:0004161,7.11e-11,25;UBERON:0004921,1.45e-10,118;UBERON:0009856,1.81e-10,26;UBERON:0002365,7.96e-09,31;UBERON:0002330,7.96e-09,31;UBERON:0001007,1.82e-08,145;UBERON:0001555,1.82e-08,145;UBERON:0007026,1.82e-08,145;UBERON:0002368,7.59e-08,35;UBERON:0003929,1.12e-07,54;UBERON:0004119,1.33e-07,160;UBERON:0000925,1.33e-07,160;UBERON:0006595,1.33e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,2.74218449960351,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,0.659326867049332,1.3480708770837,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,6.32828096485146,2.18559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@IGSF23 | |||
}} |
Revision as of 21:06, 11 September 2013
Short description: | p1@IGSF23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGSF23_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -20bp_to_ENST00000402988, NM_001205280_5end |
EntrezGene: | IGSF23 |
HGNC: | 40040 |
UniProt: | A1L1A6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.14e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.34e-30 | 4 |
intestine | 4.42e-23 | 17 |
gastrointestinal system | 5.03e-16 | 25 |
liver | 3.34e-14 | 19 |
digestive gland | 3.34e-14 | 19 |
liver bud | 3.34e-14 | 19 |
hepatic diverticulum | 2.59e-12 | 22 |
liver primordium | 2.59e-12 | 22 |
digestive tract diverticulum | 8.59e-12 | 23 |
epithelial sac | 7.11e-11 | 25 |
epithelium of foregut-midgut junction | 7.11e-11 | 25 |
anatomical boundary | 7.11e-11 | 25 |
hepatobiliary system | 7.11e-11 | 25 |
foregut-midgut junction | 7.11e-11 | 25 |
septum transversum | 7.11e-11 | 25 |
subdivision of digestive tract | 1.45e-10 | 118 |
sac | 1.81e-10 | 26 |
exocrine gland | 7.96e-09 | 31 |
exocrine system | 7.96e-09 | 31 |
digestive system | 1.82e-08 | 145 |
digestive tract | 1.82e-08 | 145 |
primitive gut | 1.82e-08 | 145 |
endocrine gland | 7.59e-08 | 35 |
gut epithelium | 1.12e-07 | 54 |
endoderm-derived structure | 1.33e-07 | 160 |
endoderm | 1.33e-07 | 160 |
presumptive endoderm | 1.33e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.