FFCP PHASE1:Hg19::chr19:47776037..47776071,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47776037..47776071,+|id=chr19:47776037..47776071,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000135;2.00e-12;3!CL:0000388;2.00e-12;3!CL:0000097;3.13e-08;5|ontology_enrichment_celltype_v019_2=CL:0000135,1.41e-12,3;CL:0000388,1.41e-12,3;CL:0000097,3.13e-08,5;CL:0002028,3.13e-08,5|ontology_enrichment_development_v019=UBERON:0005754;2.37e-10;1!UBERON:0006242;6.05e-10;1!UBERON:0004874;6.05e-10;1!UBERON:0005062;9.62e-10;4!UBERON:0007284;9.62e-10;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.12e-27!115;UBERON:0002346!3.94e-11!90;UBERON:0001049!5.94e-11!57;UBERON:0005068!5.94e-11!57;UBERON:0006241!5.94e-11!57;UBERON:0007135!5.94e-11!57;UBERON:0003075!1.26e-10!86;UBERON:0007284!1.26e-10!86;UBERON:0005743!5.76e-10!86;UBERON:0001017!2.26e-09!82;UBERON:0002616!3.84e-09!59;UBERON:0001893!1.84e-08!34;UBERON:0002020!2.60e-08!34;UBERON:0003528!2.60e-08!34;UBERON:0000073!5.63e-08!94;UBERON:0001016!5.63e-08!94;UBERON:0002619!5.74e-08!22;UBERON:0002791!6.59e-08!33;UBERON:0001950!1.02e-07!20;UBERON:0003080!1.15e-07!42;UBERON:0000955!1.38e-07!69;UBERON:0006238!1.38e-07!69;UBERON:0001869!1.79e-07!32;UBERON:0003056!5.61e-07!61;UBERON:0002780!5.71e-07!41;UBERON:0001890!5.71e-07!41;UBERON:0006240!5.71e-07!41;UBERON:0000924!6.09e-07!173;UBERON:0006601!6.09e-07!173;UBERON:0000153!6.11e-07!129;UBERON:0007811!6.11e-07!129|ontology_enrichment_uberon_v019=UBERON:0003978;1.08e-12;3!UBERON:0000946;1.08e-12;3!UBERON:0007846;2.00e-12;3!UBERON:0000043;2.00e-12;3!UBERON:0007845;2.00e-12;3!UBERON:0000998;2.37e-10;1!UBERON:0002146;2.37e-10;1!UBERON:0006868;2.37e-10;1!UBERON:0005623;2.37e-10;1!UBERON:0000989;6.05e-10;1!UBERON:0002135;6.05e-10;1!UBERON:0008811;6.05e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0003978,9.38e-13,3;UBERON:0009751,9.38e-13,3;UBERON:0000946,9.38e-13,3;UBERON:0002523,9.38e-13,3;UBERON:0005983,9.38e-13,3;UBERON:0002165,9.38e-13,3;UBERON:0002062,9.38e-13,3;UBERON:0007280,9.38e-13,3;UBERON:0007846,1.41e-12,3;UBERON:0000043,1.41e-12,3;UBERON:0007845,1.41e-12,3;UBERON:0007023,1.48e-12,114;UBERON:0000998,2.16e-10,1;UBERON:0006868,2.16e-10,1;UBERON:0002146,2.84e-10,1;UBERON:0005623,2.84e-10,1;UBERON:0002135,4.06e-10,1;UBERON:0000989,5.79e-10,1;UBERON:0008811,5.79e-10,1;UBERON:0006258,5.79e-10,1;UBERON:0005876,5.79e-10,1;UBERON:0004874,5.79e-10,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.351339142772504,0.196468613246569,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,4.61183850934277,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,1.02555725490326,0,0,0,0.47748896947538,0,1.22864280839693,0.994147647766298,0.281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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:47776037..47776071,+ | |||
|id=chr19:47776037..47776071,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.00e-12;3!CL:0000388;2.00e-12;3!CL:0000097;3.13e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.41e-12,3;CL:0000388,1.41e-12,3;CL:0000097,3.13e-08,5;CL:0002028,3.13e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.37e-10;1!UBERON:0006242;6.05e-10;1!UBERON:0004874;6.05e-10;1!UBERON:0005062;9.62e-10;4!UBERON:0007284;9.62e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-27!115;UBERON:0002346!3.94e-11!90;UBERON:0001049!5.94e-11!57;UBERON:0005068!5.94e-11!57;UBERON:0006241!5.94e-11!57;UBERON:0007135!5.94e-11!57;UBERON:0003075!1.26e-10!86;UBERON:0007284!1.26e-10!86;UBERON:0005743!5.76e-10!86;UBERON:0001017!2.26e-09!82;UBERON:0002616!3.84e-09!59;UBERON:0001893!1.84e-08!34;UBERON:0002020!2.60e-08!34;UBERON:0003528!2.60e-08!34;UBERON:0000073!5.63e-08!94;UBERON:0001016!5.63e-08!94;UBERON:0002619!5.74e-08!22;UBERON:0002791!6.59e-08!33;UBERON:0001950!1.02e-07!20;UBERON:0003080!1.15e-07!42;UBERON:0000955!1.38e-07!69;UBERON:0006238!1.38e-07!69;UBERON:0001869!1.79e-07!32;UBERON:0003056!5.61e-07!61;UBERON:0002780!5.71e-07!41;UBERON:0001890!5.71e-07!41;UBERON:0006240!5.71e-07!41;UBERON:0000924!6.09e-07!173;UBERON:0006601!6.09e-07!173;UBERON:0000153!6.11e-07!129;UBERON:0007811!6.11e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.08e-12;3!UBERON:0000946;1.08e-12;3!UBERON:0007846;2.00e-12;3!UBERON:0000043;2.00e-12;3!UBERON:0007845;2.00e-12;3!UBERON:0000998;2.37e-10;1!UBERON:0002146;2.37e-10;1!UBERON:0006868;2.37e-10;1!UBERON:0005623;2.37e-10;1!UBERON:0000989;6.05e-10;1!UBERON:0002135;6.05e-10;1!UBERON:0008811;6.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,9.38e-13,3;UBERON:0009751,9.38e-13,3;UBERON:0000946,9.38e-13,3;UBERON:0002523,9.38e-13,3;UBERON:0005983,9.38e-13,3;UBERON:0002165,9.38e-13,3;UBERON:0002062,9.38e-13,3;UBERON:0007280,9.38e-13,3;UBERON:0007846,1.41e-12,3;UBERON:0000043,1.41e-12,3;UBERON:0007845,1.41e-12,3;UBERON:0007023,1.48e-12,114;UBERON:0000998,2.16e-10,1;UBERON:0006868,2.16e-10,1;UBERON:0002146,2.84e-10,1;UBERON:0005623,2.84e-10,1;UBERON:0002135,4.06e-10,1;UBERON:0000989,5.79e-10,1;UBERON:0008811,5.79e-10,1;UBERON:0006258,5.79e-10,1;UBERON:0005876,5.79e-10,1;UBERON:0004874,5.79e-10,1 | |||
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| |||
|short_description=p@chr19:47776037..47776071,+ | |||
}} |
Revision as of 21:29, 11 September 2013
Short description: | p@chr19:47776037..47776071, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47776037..47776071, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.41e-12 | 3 |
tendon cell | 1.41e-12 | 3 |
mast cell | 3.13e-08 | 5 |
basophil mast progenitor cell | 3.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
valve | 9.38e-13 | 3 |
cardiac mesenchyme | 9.38e-13 | 3 |
cardial valve | 9.38e-13 | 3 |
tunica intima | 9.38e-13 | 3 |
heart layer | 9.38e-13 | 3 |
endocardium | 9.38e-13 | 3 |
endocardial cushion | 9.38e-13 | 3 |
presumptive endocardium | 9.38e-13 | 3 |
dense regular connective tissue | 1.41e-12 | 3 |
tendon | 1.41e-12 | 3 |
regular connective tissue | 1.41e-12 | 3 |
adult organism | 1.48e-12 | 114 |
seminal vesicle | 2.16e-10 | 1 |
seminal fluid secreting gland | 2.16e-10 | 1 |
pulmonary valve | 2.84e-10 | 1 |
semi-lunar valve | 2.84e-10 | 1 |
mitral valve | 4.06e-10 | 1 |
penis | 5.79e-10 | 1 |
intromittent organ | 5.79e-10 | 1 |
lateral plate mesenchyme | 5.79e-10 | 1 |
undifferentiated genital tubercle | 5.79e-10 | 1 |
somatopleure | 5.79e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.