FFCP PHASE1:Hg19::chr19:56146912..56146939,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C489|description=CAGE_peak_at_chr19:56146912..56146939,-|id=chr19:56146912..56146939,-|ontology_enrichment_celltype=CL:0000738!2.81e-37!140;CL:0002031!1.89e-35!124;CL:0002057!1.36e-31!42;CL:0002032!1.87e-31!165;CL:0000837!1.87e-31!165;CL:0000037!1.11e-29!172;CL:0000566!1.11e-29!172;CL:0000557!3.42e-29!71;CL:0000860!4.64e-29!45;CL:0000988!2.22e-27!182;CL:0000766!1.27e-26!76;CL:0000839!4.18e-25!70;CL:0002087!1.13e-24!119;CL:0000763!5.28e-23!112;CL:0000049!5.28e-23!112;CL:0002009!7.76e-22!65;CL:0002194!1.42e-18!63;CL:0000576!1.42e-18!63;CL:0000040!1.42e-18!63;CL:0000559!1.42e-18!63;CL:0002393!2.80e-16!9;CL:0002397!2.80e-16!9;CL:0002274!6.48e-14!5;CL:0000457!6.48e-14!5;CL:0002191!6.48e-14!5;CL:0000097!6.48e-14!5;CL:0000831!6.48e-14!5;CL:0002028!6.48e-14!5;CL:0000623!9.26e-11!3;CL:0000825!9.26e-11!3;CL:0000134!1.12e-10!358;CL:0002320!3.11e-10!365;CL:0000453!5.13e-10!5;CL:0000219!1.09e-08!390;CL:0000838!3.37e-08!52;CL:0000542!5.52e-08!53;CL:0000051!5.52e-08!53;CL:0001014!1.11e-07!2;CL:0001016!1.11e-07!2;CL:0000163!1.36e-07!9;CL:0000048!2.03e-07!430;CL:0000034!2.25e-07!444;CL:0000723!3.77e-07!436|ontology_enrichment_celltype_v019=CL:0000623;4.02e-50;3!CL:0001014;3.94e-34;2!CL:0001016;3.94e-34;2!CL:0002393;1.74e-25;6!CL:0002397;1.74e-25;6!CL:0000453;2.66e-14;5!CL:0000840;4.42e-12;5!CL:0000990;2.33e-08;8!CL:0000451;5.39e-07;10!CL:0000767;6.88e-07;3!CL:0000625;6.94e-07;11|ontology_enrichment_celltype_v019_2=CL:0000623,1.89e-50,3;CL:0000825,1.89e-50,3;CL:0001014,5.07e-34,2;CL:0001016,5.07e-34,2;CL:0002393,2.99e-17,9;CL:0002397,2.99e-17,9;CL:0000453,2.95e-14,5;CL:0000738,8.47e-14,136;CL:0002031,6.51e-13,120;CL:0000840,4.81e-12,5;CL:0001029,4.81e-12,5;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177;CL:0002087,1.40e-08,115;CL:0000990,2.46e-08,8;CL:0000838,5.19e-08,52;CL:0000542,7.35e-08,53;CL:0000051,7.35e-08,53;CL:0000451,5.64e-07,10;CL:0000625,6.94e-07,11;CL:0000767,7.28e-07,3;CL:0002009,9.91e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.29e-29!80;UBERON:0001474!1.36e-26!86;UBERON:0002390!7.78e-23!102;UBERON:0003061!7.78e-23!102;UBERON:0004765!2.06e-21!101;UBERON:0001434!2.06e-21!101;UBERON:0002193!4.90e-20!112;UBERON:0002405!4.04e-19!115;UBERON:0002384!4.85e-11!375;UBERON:0002204!1.12e-10!167;UBERON:0003081!7.76e-08!216|ontology_enrichment_uberon_v019=UBERON:0007195;1.12e-17;1|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.70e-17,1;UBERON:0002371,1.55e-07,76;UBERON:0001474,5.69e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,0.309632246632152,0,0,0,0,0,0,2.21598163412751,2.4065333696417,1.95309783644267,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0.425208599930087,0.419317291016752,0.44931452458598,0.300353785683013,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.20964045934839,1.33720097891754,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.94064817373566,2.69520376187472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12486945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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr19:56146912..56146939,- | |||
|id=chr19:56146912..56146939,- | |||
|ontology_enrichment_celltype=CL:0000738!2.81e-37!140;CL:0002031!1.89e-35!124;CL:0002057!1.36e-31!42;CL:0002032!1.87e-31!165;CL:0000837!1.87e-31!165;CL:0000037!1.11e-29!172;CL:0000566!1.11e-29!172;CL:0000557!3.42e-29!71;CL:0000860!4.64e-29!45;CL:0000988!2.22e-27!182;CL:0000766!1.27e-26!76;CL:0000839!4.18e-25!70;CL:0002087!1.13e-24!119;CL:0000763!5.28e-23!112;CL:0000049!5.28e-23!112;CL:0002009!7.76e-22!65;CL:0002194!1.42e-18!63;CL:0000576!1.42e-18!63;CL:0000040!1.42e-18!63;CL:0000559!1.42e-18!63;CL:0002393!2.80e-16!9;CL:0002397!2.80e-16!9;CL:0002274!6.48e-14!5;CL:0000457!6.48e-14!5;CL:0002191!6.48e-14!5;CL:0000097!6.48e-14!5;CL:0000831!6.48e-14!5;CL:0002028!6.48e-14!5;CL:0000623!9.26e-11!3;CL:0000825!9.26e-11!3;CL:0000134!1.12e-10!358;CL:0002320!3.11e-10!365;CL:0000453!5.13e-10!5;CL:0000219!1.09e-08!390;CL:0000838!3.37e-08!52;CL:0000542!5.52e-08!53;CL:0000051!5.52e-08!53;CL:0001014!1.11e-07!2;CL:0001016!1.11e-07!2;CL:0000163!1.36e-07!9;CL:0000048!2.03e-07!430;CL:0000034!2.25e-07!444;CL:0000723!3.77e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.02e-50;3!CL:0001014;3.94e-34;2!CL:0001016;3.94e-34;2!CL:0002393;1.74e-25;6!CL:0002397;1.74e-25;6!CL:0000453;2.66e-14;5!CL:0000840;4.42e-12;5!CL:0000990;2.33e-08;8!CL:0000451;5.39e-07;10!CL:0000767;6.88e-07;3!CL:0000625;6.94e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.89e-50,3;CL:0000825,1.89e-50,3;CL:0001014,5.07e-34,2;CL:0001016,5.07e-34,2;CL:0002393,2.99e-17,9;CL:0002397,2.99e-17,9;CL:0000453,2.95e-14,5;CL:0000738,8.47e-14,136;CL:0002031,6.51e-13,120;CL:0000840,4.81e-12,5;CL:0001029,4.81e-12,5;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177;CL:0002087,1.40e-08,115;CL:0000990,2.46e-08,8;CL:0000838,5.19e-08,52;CL:0000542,7.35e-08,53;CL:0000051,7.35e-08,53;CL:0000451,5.64e-07,10;CL:0000625,6.94e-07,11;CL:0000767,7.28e-07,3;CL:0002009,9.91e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-29!80;UBERON:0001474!1.36e-26!86;UBERON:0002390!7.78e-23!102;UBERON:0003061!7.78e-23!102;UBERON:0004765!2.06e-21!101;UBERON:0001434!2.06e-21!101;UBERON:0002193!4.90e-20!112;UBERON:0002405!4.04e-19!115;UBERON:0002384!4.85e-11!375;UBERON:0002204!1.12e-10!167;UBERON:0003081!7.76e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.12e-17;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.70e-17,1;UBERON:0002371,1.55e-07,76;UBERON:0001474,5.69e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,0.309632246632152,0,0,0,0,0,0,2.21598163412751,2.4065333696417,1.95309783644267,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0.425208599930087,0.419317291016752,0.44931452458598,0.300353785683013,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.20964045934839,1.33720097891754,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.94064817373566,2.69520376187472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.86900977278975,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:56146912..56146939,- | |||
}} |
Revision as of 22:31, 11 September 2013
Short description: | p@chr19:56146912..56146939, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:56146912..56146939, - |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.89e-50 | 3 |
pro-NK cell | 1.89e-50 | 3 |
CD1a-positive Langerhans cell | 5.07e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.07e-34 | 2 |
intermediate monocyte | 2.99e-17 | 9 |
CD14-positive, CD16-positive monocyte | 2.99e-17 | 9 |
Langerhans cell | 2.95e-14 | 5 |
leukocyte | 8.47e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 6.51e-13 | 120 |
immature conventional dendritic cell | 4.81e-12 | 5 |
common dendritic progenitor | 4.81e-12 | 5 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
hematopoietic stem cell | 5.14e-11 | 168 |
hematopoietic cell | 2.07e-10 | 177 |
nongranular leukocyte | 1.40e-08 | 115 |
conventional dendritic cell | 2.46e-08 | 8 |
lymphoid lineage restricted progenitor cell | 5.19e-08 | 52 |
lymphocyte | 7.35e-08 | 53 |
common lymphoid progenitor | 7.35e-08 | 53 |
dendritic cell | 5.64e-07 | 10 |
CD8-positive, alpha-beta T cell | 6.94e-07 | 11 |
basophil | 7.28e-07 | 3 |
macrophage dendritic cell progenitor | 9.91e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.70e-17 | 1 |
bone marrow | 1.55e-07 | 76 |
bone element | 5.69e-07 | 82 |
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