FFCP PHASE1:Hg19::chr19:843540..843551,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5657|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9495|TSSclassifier=W|UniProt=P24158|association_with_transcript=80bp_to_M29142,X56132_5end|coexpression_cluster_id=C209|description=CAGE_peak_3_at_PRTN3_5end|id=chr19:843540..843551,+|ontology_enrichment_celltype=CL:0000763!1.45e-11!112;CL:0000049!1.45e-11!112;CL:0001024!8.78e-09!1;CL:0000037!1.15e-07!172;CL:0000566!1.15e-07!172;CL:0000988!4.41e-07!182;CL:0002032!5.76e-07!165;CL:0000837!5.76e-07!165|ontology_enrichment_celltype_v019=CL:0000037;1.07e-14;1!CL:0001024;1.07e-14;1!CL:0002032;1.97e-14;1!CL:0000557;1.97e-14;1!CL:0000763;5.42e-08;100|ontology_enrichment_celltype_v019_2=CL:0001024,1.07e-14,1;CL:0000763,1.98e-13,108;CL:0000049,1.98e-13,108;CL:0000037,6.83e-10,168;CL:0000988,2.57e-09,177;CL:0002032,1.32e-08,161;CL:0000837,1.32e-08,161|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!2.99e-37!31;DOID:1240!4.05e-29!39;DOID:2531!1.07e-21!51;DOID:0060083!1.07e-21!51;DOID:225!7.56e-09!1|ontology_enrichment_disease_v019=DOID:8692;1.22e-39;31!DOID:1240;1.21e-25;39!DOID:2531;1.26e-15;51!DOID:0060083;1.26e-15;51!DOID:225;8.74e-15;1!DOID:74;4.85e-08;2|ontology_enrichment_disease_v019_2=DOID:8692,1.86e-41,31;DOID:1240,9.13e-33,39;DOID:2531,7.91e-25,51;DOID:0060083,7.91e-25,51;DOID:225,8.17e-15,1;DOID:0050686,1.80e-08,137;DOID:74,4.69e-08,2|ontology_enrichment_uberon=UBERON:0007190!3.79e-08!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3356337304331,0.280797178113459,0.684704037099577,6.26719583092093,0,0,1.1241165257259,5.65039180134933,1.27753871307098,1.03051603426729,1.22896305723383,1.56573275524691,3.00328455081435,1.36771666781428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94759399868321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@PRTN3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5657 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9495 | |||
|TSSclassifier=W | |||
|UniProt=P24158 | |||
|association_with_transcript=80bp_to_M29142,X56132_5end | |||
|coexpression_cluster_id=C209 | |||
|description=CAGE_peak_3_at_PRTN3_5end | |||
|id=chr19:843540..843551,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.45e-11!112;CL:0000049!1.45e-11!112;CL:0001024!8.78e-09!1;CL:0000037!1.15e-07!172;CL:0000566!1.15e-07!172;CL:0000988!4.41e-07!182;CL:0002032!5.76e-07!165;CL:0000837!5.76e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.07e-14;1!CL:0001024;1.07e-14;1!CL:0002032;1.97e-14;1!CL:0000557;1.97e-14;1!CL:0000763;5.42e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.07e-14,1;CL:0000763,1.98e-13,108;CL:0000049,1.98e-13,108;CL:0000037,6.83e-10,168;CL:0000988,2.57e-09,177;CL:0002032,1.32e-08,161;CL:0000837,1.32e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.99e-37!31;DOID:1240!4.05e-29!39;DOID:2531!1.07e-21!51;DOID:0060083!1.07e-21!51;DOID:225!7.56e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.22e-39;31!DOID:1240;1.21e-25;39!DOID:2531;1.26e-15;51!DOID:0060083;1.26e-15;51!DOID:225;8.74e-15;1!DOID:74;4.85e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.86e-41,31;DOID:1240,9.13e-33,39;DOID:2531,7.91e-25,51;DOID:0060083,7.91e-25,51;DOID:225,8.17e-15,1;DOID:0050686,1.80e-08,137;DOID:74,4.69e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007190!3.79e-08!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3356337304331,0.280797178113459,0.684704037099577,6.26719583092093,0,0,1.1241165257259,5.65039180134933,1.27753871307098,1.03051603426729,1.22896305723383,1.56573275524691,3.00328455081435,1.36771666781428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94759399868321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PRTN3 | |||
}} |
Revision as of 23:00, 11 September 2013
Short description: | p3@PRTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PRTN3_5end |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | 80bp_to_M29142, X56132_5end |
EntrezGene: | PRTN3 |
HGNC: | 9495 |
UniProt: | P24158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.07e-14 | 1 |
myeloid cell | 1.98e-13 | 108 |
common myeloid progenitor | 1.98e-13 | 108 |
hematopoietic stem cell | 6.83e-10 | 168 |
hematopoietic cell | 2.57e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.32e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.86e-41 | 31 |
leukemia | 9.13e-33 | 39 |
hematologic cancer | 7.91e-25 | 51 |
immune system cancer | 7.91e-25 | 51 |
syndrome | 8.17e-15 | 1 |
organ system cancer | 1.80e-08 | 137 |
hematopoietic system disease | 4.69e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.