FFCP PHASE1:Hg19::chr1:110740082..110740093,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2410|description=CAGE_peak_at_chr1:110740082..110740093,+|id=chr1:110740082..110740093,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002567;1.12e-17;3|ontology_enrichment_celltype_v019_2=CL:0002567,1.12e-17,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.08e-44!57;UBERON:0005068!2.08e-44!57;UBERON:0006241!2.08e-44!57;UBERON:0007135!2.08e-44!57;UBERON:0002616!9.90e-43!59;UBERON:0000955!8.66e-42!69;UBERON:0006238!8.66e-42!69;UBERON:0001893!2.40e-39!34;UBERON:0001869!1.73e-37!32;UBERON:0002619!2.79e-37!22;UBERON:0001017!4.43e-37!82;UBERON:0002791!5.72e-36!33;UBERON:0002780!6.71e-36!41;UBERON:0001890!6.71e-36!41;UBERON:0006240!6.71e-36!41;UBERON:0001950!1.65e-35!20;UBERON:0005743!4.23e-35!86;UBERON:0002020!4.99e-35!34;UBERON:0003528!4.99e-35!34;UBERON:0003080!5.85e-35!42;UBERON:0000956!1.30e-32!25;UBERON:0000203!1.30e-32!25;UBERON:0000073!3.05e-31!94;UBERON:0001016!3.05e-31!94;UBERON:0003075!4.81e-30!86;UBERON:0007284!4.81e-30!86;UBERON:0007023!1.57e-29!115;UBERON:0002346!1.86e-28!90;UBERON:0003056!7.38e-23!61;UBERON:0000033!5.09e-21!123;UBERON:0001871!5.43e-21!7;UBERON:0000153!9.02e-20!129;UBERON:0007811!9.02e-20!129;UBERON:0000200!1.17e-19!6;UBERON:0004121!3.37e-16!169;UBERON:0000924!1.11e-15!173;UBERON:0006601!1.11e-15!173;UBERON:0000349!2.30e-15!5;UBERON:0001872!2.67e-15!5;UBERON:0002771!7.98e-15!3;UBERON:0004733!3.53e-13!12;UBERON:0002028!3.53e-13!12;UBERON:0007277!3.53e-13!12;UBERON:0000025!2.72e-12!194;UBERON:0004732!4.05e-12!13;UBERON:0001876!1.38e-10!2;UBERON:0003076!2.01e-10!15;UBERON:0003057!2.01e-10!15;UBERON:0004111!1.41e-09!241;UBERON:0002298!3.21e-09!8;UBERON:0002420!1.46e-08!9;UBERON:0007245!1.46e-08!9;UBERON:0010009!1.46e-08!9;UBERON:0010011!1.46e-08!9;UBERON:0000454!1.46e-08!9;UBERON:0002680!1.61e-08!9;UBERON:0001895!1.61e-08!9;UBERON:0010092!1.61e-08!9;UBERON:0000064!2.44e-08!219;UBERON:0000483!1.72e-07!309;UBERON:0000119!2.36e-07!312;UBERON:0000988!3.23e-07!3;UBERON:0000477!4.32e-07!286|ontology_enrichment_uberon_v019=UBERON:0001871;3.16e-29;6!UBERON:0002771;5.56e-26;2!UBERON:0001876;5.56e-26;2!UBERON:0000349;2.94e-11;5!UBERON:0001950;1.61e-10;20!UBERON:0002619;1.07e-09;22!UBERON:0000200;1.32e-09;6!UBERON:0000956;1.07e-08;25!UBERON:0000203;1.07e-08;25!UBERON:0001893;3.47e-07;34!UBERON:0003528;5.37e-07;34!UBERON:0002791;5.37e-07;32!UBERON:0002020;5.37e-07;34!UBERON:0001869;5.37e-07;32!UBERON:0002420;7.91e-07;9!UBERON:0007245;7.91e-07;9!UBERON:0010009;7.91e-07;9!UBERON:0010011;7.91e-07;9!UBERON:0000454;7.91e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.74e-29,6;UBERON:0001876,4.32e-26,2;UBERON:0002771,5.56e-26,2;UBERON:0000349,2.66e-11,5;UBERON:0001950,1.53e-10,20;UBERON:0002619,1.02e-09,22;UBERON:0000200,1.32e-09,6;UBERON:0000956,1.03e-08,25;UBERON:0000203,1.03e-08,25;UBERON:0002791,4.46e-07,32;UBERON:0001869,4.46e-07,32;UBERON:0002420,7.48e-07,9;UBERON:0007245,7.48e-07,9;UBERON:0010009,7.48e-07,9;UBERON:0010011,7.48e-07,9;UBERON:0000454,7.48e-07,9;UBERON:0003528,9.98e-07,34;UBERON:0002020,9.98e-07,34;UBERON:0001893,9.98e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,2.98244294329889,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.36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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2410 | |||
|description=CAGE_peak_at_chr1:110740082..110740093,+ | |||
|id=chr1:110740082..110740093,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.12e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.12e-17,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.08e-44!57;UBERON:0005068!2.08e-44!57;UBERON:0006241!2.08e-44!57;UBERON:0007135!2.08e-44!57;UBERON:0002616!9.90e-43!59;UBERON:0000955!8.66e-42!69;UBERON:0006238!8.66e-42!69;UBERON:0001893!2.40e-39!34;UBERON:0001869!1.73e-37!32;UBERON:0002619!2.79e-37!22;UBERON:0001017!4.43e-37!82;UBERON:0002791!5.72e-36!33;UBERON:0002780!6.71e-36!41;UBERON:0001890!6.71e-36!41;UBERON:0006240!6.71e-36!41;UBERON:0001950!1.65e-35!20;UBERON:0005743!4.23e-35!86;UBERON:0002020!4.99e-35!34;UBERON:0003528!4.99e-35!34;UBERON:0003080!5.85e-35!42;UBERON:0000956!1.30e-32!25;UBERON:0000203!1.30e-32!25;UBERON:0000073!3.05e-31!94;UBERON:0001016!3.05e-31!94;UBERON:0003075!4.81e-30!86;UBERON:0007284!4.81e-30!86;UBERON:0007023!1.57e-29!115;UBERON:0002346!1.86e-28!90;UBERON:0003056!7.38e-23!61;UBERON:0000033!5.09e-21!123;UBERON:0001871!5.43e-21!7;UBERON:0000153!9.02e-20!129;UBERON:0007811!9.02e-20!129;UBERON:0000200!1.17e-19!6;UBERON:0004121!3.37e-16!169;UBERON:0000924!1.11e-15!173;UBERON:0006601!1.11e-15!173;UBERON:0000349!2.30e-15!5;UBERON:0001872!2.67e-15!5;UBERON:0002771!7.98e-15!3;UBERON:0004733!3.53e-13!12;UBERON:0002028!3.53e-13!12;UBERON:0007277!3.53e-13!12;UBERON:0000025!2.72e-12!194;UBERON:0004732!4.05e-12!13;UBERON:0001876!1.38e-10!2;UBERON:0003076!2.01e-10!15;UBERON:0003057!2.01e-10!15;UBERON:0004111!1.41e-09!241;UBERON:0002298!3.21e-09!8;UBERON:0002420!1.46e-08!9;UBERON:0007245!1.46e-08!9;UBERON:0010009!1.46e-08!9;UBERON:0010011!1.46e-08!9;UBERON:0000454!1.46e-08!9;UBERON:0002680!1.61e-08!9;UBERON:0001895!1.61e-08!9;UBERON:0010092!1.61e-08!9;UBERON:0000064!2.44e-08!219;UBERON:0000483!1.72e-07!309;UBERON:0000119!2.36e-07!312;UBERON:0000988!3.23e-07!3;UBERON:0000477!4.32e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;3.16e-29;6!UBERON:0002771;5.56e-26;2!UBERON:0001876;5.56e-26;2!UBERON:0000349;2.94e-11;5!UBERON:0001950;1.61e-10;20!UBERON:0002619;1.07e-09;22!UBERON:0000200;1.32e-09;6!UBERON:0000956;1.07e-08;25!UBERON:0000203;1.07e-08;25!UBERON:0001893;3.47e-07;34!UBERON:0003528;5.37e-07;34!UBERON:0002791;5.37e-07;32!UBERON:0002020;5.37e-07;34!UBERON:0001869;5.37e-07;32!UBERON:0002420;7.91e-07;9!UBERON:0007245;7.91e-07;9!UBERON:0010009;7.91e-07;9!UBERON:0010011;7.91e-07;9!UBERON:0000454;7.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.74e-29,6;UBERON:0001876,4.32e-26,2;UBERON:0002771,5.56e-26,2;UBERON:0000349,2.66e-11,5;UBERON:0001950,1.53e-10,20;UBERON:0002619,1.02e-09,22;UBERON:0000200,1.32e-09,6;UBERON:0000956,1.03e-08,25;UBERON:0000203,1.03e-08,25;UBERON:0002791,4.46e-07,32;UBERON:0001869,4.46e-07,32;UBERON:0002420,7.48e-07,9;UBERON:0007245,7.48e-07,9;UBERON:0010009,7.48e-07,9;UBERON:0010011,7.48e-07,9;UBERON:0000454,7.48e-07,9;UBERON:0003528,9.98e-07,34;UBERON:0002020,9.98e-07,34;UBERON:0001893,9.98e-07,34 | |||
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|short_description=p@chr1:110740082..110740093,+ | |||
}} |
Revision as of 23:25, 11 September 2013
Short description: | p@chr1:110740082..110740093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:110740082..110740093, + |
Coexpression cluster: | C2410_medial_amygdala_brain_smallcell_putamen_cerebellum_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.74e-29 | 6 |
amygdala | 4.32e-26 | 2 |
middle temporal gyrus | 5.56e-26 | 2 |
limbic system | 2.66e-11 | 5 |
neocortex | 1.53e-10 | 20 |
regional part of cerebral cortex | 1.02e-09 | 22 |
gyrus | 1.32e-09 | 6 |
cerebral cortex | 1.03e-08 | 25 |
pallium | 1.03e-08 | 25 |
regional part of telencephalon | 4.46e-07 | 32 |
cerebral hemisphere | 4.46e-07 | 32 |
basal ganglion | 7.48e-07 | 9 |
nuclear complex of neuraxis | 7.48e-07 | 9 |
aggregate regional part of brain | 7.48e-07 | 9 |
collection of basal ganglia | 7.48e-07 | 9 |
cerebral subcortex | 7.48e-07 | 9 |
brain grey matter | 9.98e-07 | 34 |
gray matter | 9.98e-07 | 34 |
telencephalon | 9.98e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.