FFCP PHASE1:Hg19::chr1:182584314..182584339,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=284648|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=39bp_to_NR_036490_5end|coexpression_cluster_id=C2153|description=CAGE_peak_3_at_LOC284648_5end|id=chr1:182584314..182584339,+|ontology_enrichment_celltype=CL:0000738!3.31e-21!140;CL:0000037!3.59e-18!172;CL:0000566!3.59e-18!172;CL:0002087!9.31e-17!119;CL:0000988!1.65e-16!182;CL:0002031!1.54e-13!124;CL:0002032!4.43e-13!165;CL:0000837!4.43e-13!165;CL:0000838!3.00e-12!52;CL:0000542!6.34e-12!53;CL:0000051!6.34e-12!53;CL:0000624!6.88e-11!6;CL:0000623!3.52e-09!3;CL:0000825!3.52e-09!3;CL:0000784!6.39e-09!3;CL:0000767!1.21e-08!3;CL:0000134!1.87e-08!358;CL:0000842!3.27e-08!3;CL:0000219!4.26e-08!390;CL:0000791!4.73e-08!18;CL:0000789!4.73e-08!18;CL:0002420!4.73e-08!18;CL:0002419!4.73e-08!18;CL:0000790!4.73e-08!18;CL:0002320!4.90e-08!365|ontology_enrichment_celltype_v019=CL:0000623;1.51e-54;3!CL:0000784;7.46e-25;3!CL:0000451;2.20e-15;10!CL:0000840;4.52e-13;5!CL:0000771;1.50e-10;2!CL:0001014;2.07e-10;2!CL:0001016;2.07e-10;2!CL:0000990;5.00e-09;8!CL:0000226;2.32e-07;3!CL:0000842;2.32e-07;3|ontology_enrichment_celltype_v019_2=CL:0000623,1.51e-54,3;CL:0000825,1.51e-54,3;CL:0000784,1.01e-24,3;CL:0000451,2.49e-15,10;CL:0000840,5.11e-13,5;CL:0001029,5.11e-13,5;CL:0000771,1.43e-10,2;CL:0001014,2.07e-10,2;CL:0001016,2.07e-10,2;CL:0000738,4.29e-10,136;CL:0000990,5.42e-09,8;CL:0000037,4.70e-08,168;CL:0000988,1.30e-07,177;CL:0000226,2.19e-07,3;CL:0000842,2.19e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.81e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.863077176966451,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,2.64342657158052,1.68152568894461,0,0.196709770113833,0.786021525498329,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,2.15627574859517,3.33691894327346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@LOC284648}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=284648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=39bp_to_NR_036490_5end | |||
|coexpression_cluster_id=C2153 | |||
|description=CAGE_peak_3_at_LOC284648_5end | |||
|id=chr1:182584314..182584339,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.31e-21!140;CL:0000037!3.59e-18!172;CL:0000566!3.59e-18!172;CL:0002087!9.31e-17!119;CL:0000988!1.65e-16!182;CL:0002031!1.54e-13!124;CL:0002032!4.43e-13!165;CL:0000837!4.43e-13!165;CL:0000838!3.00e-12!52;CL:0000542!6.34e-12!53;CL:0000051!6.34e-12!53;CL:0000624!6.88e-11!6;CL:0000623!3.52e-09!3;CL:0000825!3.52e-09!3;CL:0000784!6.39e-09!3;CL:0000767!1.21e-08!3;CL:0000134!1.87e-08!358;CL:0000842!3.27e-08!3;CL:0000219!4.26e-08!390;CL:0000791!4.73e-08!18;CL:0000789!4.73e-08!18;CL:0002420!4.73e-08!18;CL:0002419!4.73e-08!18;CL:0000790!4.73e-08!18;CL:0002320!4.90e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.51e-54;3!CL:0000784;7.46e-25;3!CL:0000451;2.20e-15;10!CL:0000840;4.52e-13;5!CL:0000771;1.50e-10;2!CL:0001014;2.07e-10;2!CL:0001016;2.07e-10;2!CL:0000990;5.00e-09;8!CL:0000226;2.32e-07;3!CL:0000842;2.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.51e-54,3;CL:0000825,1.51e-54,3;CL:0000784,1.01e-24,3;CL:0000451,2.49e-15,10;CL:0000840,5.11e-13,5;CL:0001029,5.11e-13,5;CL:0000771,1.43e-10,2;CL:0001014,2.07e-10,2;CL:0001016,2.07e-10,2;CL:0000738,4.29e-10,136;CL:0000990,5.42e-09,8;CL:0000037,4.70e-08,168;CL:0000988,1.30e-07,177;CL:0000226,2.19e-07,3;CL:0000842,2.19e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.81e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.863077176966451,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,2.64342657158052,1.68152568894461,0,0.196709770113833,0.786021525498329,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0.604820229674197,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,2.15627574859517,3.33691894327346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LOC284648 | |||
}} |
Revision as of 02:08, 12 September 2013
Short description: | p3@LOC284648 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC284648_5end |
Coexpression cluster: | C2153_Eosinophils_Natural_Peripheral_CD34_Basophils_CD8_Dendritic |
Association with transcript: | 39bp_to_NR_036490_5end |
EntrezGene: | LOC284648 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.51e-54 | 3 |
pro-NK cell | 1.51e-54 | 3 |
plasmacytoid dendritic cell | 1.01e-24 | 3 |
dendritic cell | 2.49e-15 | 10 |
immature conventional dendritic cell | 5.11e-13 | 5 |
common dendritic progenitor | 5.11e-13 | 5 |
eosinophil | 1.43e-10 | 2 |
CD1a-positive Langerhans cell | 2.07e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.07e-10 | 2 |
leukocyte | 4.29e-10 | 136 |
conventional dendritic cell | 5.42e-09 | 8 |
hematopoietic stem cell | 4.70e-08 | 168 |
hematopoietic cell | 1.30e-07 | 177 |
single nucleate cell | 2.19e-07 | 3 |
mononuclear cell | 2.19e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.