FFCP PHASE1:Hg19::chr1:230846000..230846009,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C129|description=CAGE_peak_at_chr1:230846000..230846009,-|id=chr1:230846000..230846009,-|ontology_enrichment_celltype=CL:0000181!9.89e-15!12;CL:0000417!9.89e-15!12;CL:0000668!9.89e-15!12;CL:0000414!9.89e-15!12;CL:0000412!9.89e-15!12;CL:0000182!9.89e-15!12|ontology_enrichment_celltype_v019=CL:0000182;2.68e-65;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.84e-65,12;CL:0000223,1.22e-13,58|ontology_enrichment_development_v019=UBERON:0004161;5.08e-50;11!UBERON:0009497;2.12e-42;13!UBERON:0001041;1.41e-18;30!UBERON:0003104;6.06e-18;31!CL:0000223;4.10e-10;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.77e-42!57;UBERON:0005068!4.77e-42!57;UBERON:0006241!4.77e-42!57;UBERON:0007135!4.77e-42!57;UBERON:0002616!4.12e-37!59;UBERON:0001017!6.75e-36!82;UBERON:0000955!1.60e-35!69;UBERON:0006238!1.60e-35!69;UBERON:0005743!6.97e-34!86;UBERON:0002780!4.21e-30!41;UBERON:0001890!4.21e-30!41;UBERON:0006240!4.21e-30!41;UBERON:0000073!5.81e-30!94;UBERON:0001016!5.81e-30!94;UBERON:0007023!1.21e-29!115;UBERON:0003080!2.82e-29!42;UBERON:0003075!1.66e-27!86;UBERON:0007284!1.66e-27!86;UBERON:0001893!1.08e-26!34;UBERON:0002346!5.83e-26!90;UBERON:0001869!2.50e-25!32;UBERON:0002791!1.60e-24!33;UBERON:0002020!9.33e-24!34;UBERON:0003528!9.33e-24!34;UBERON:0000025!4.29e-19!194;UBERON:0003056!1.13e-18!61;UBERON:0000153!1.65e-18!129;UBERON:0007811!1.65e-18!129;UBERON:0002619!1.79e-18!22;UBERON:0000033!2.65e-18!123;UBERON:0001950!5.25e-17!20;UBERON:0000956!4.89e-16!25;UBERON:0000203!4.89e-16!25;UBERON:0002107!9.78e-15!19;UBERON:0006925!9.78e-15!19;UBERON:0008836!9.78e-15!19;UBERON:0004111!1.82e-14!241;UBERON:0003076!1.03e-13!15;UBERON:0003057!1.03e-13!15;UBERON:0004121!2.38e-13!169;UBERON:0000200!3.68e-13!6;UBERON:0000924!7.24e-13!173;UBERON:0006601!7.24e-13!173;UBERON:0008835!1.80e-12!22;UBERON:0003894!1.80e-12!22;UBERON:0000477!2.45e-12!286;UBERON:0000483!2.54e-12!309;UBERON:0000119!4.19e-12!312;UBERON:0009854!7.53e-12!23;UBERON:0007499!9.38e-11!25;UBERON:0009497!9.38e-11!25;UBERON:0000015!9.38e-11!25;UBERON:0002423!9.38e-11!25;UBERON:0006235!9.38e-11!25;UBERON:0004161!9.38e-11!25;UBERON:0001871!1.77e-10!7;UBERON:0005057!2.86e-10!26;UBERON:0009856!2.86e-10!26;UBERON:0002771!3.15e-10!3;UBERON:0004733!7.58e-10!12;UBERON:0002028!7.58e-10!12;UBERON:0007277!7.58e-10!12;UBERON:0000475!1.50e-09!365;UBERON:0002420!1.68e-09!9;UBERON:0007245!1.68e-09!9;UBERON:0010009!1.68e-09!9;UBERON:0010011!1.68e-09!9;UBERON:0000454!1.68e-09!9;UBERON:0002308!2.17e-09!9;UBERON:0000125!2.17e-09!9;UBERON:0004732!4.89e-09!13;UBERON:0002368!8.61e-09!35;UBERON:0002365!2.53e-08!31;UBERON:0002330!2.53e-08!31;UBERON:0000369!2.71e-08!4;UBERON:0002435!2.71e-08!4;UBERON:0000204!2.71e-08!4;UBERON:0010082!2.71e-08!4;UBERON:0009663!4.75e-08!7;UBERON:0002298!3.94e-07!8;UBERON:0000349!4.60e-07!5;UBERON:0002021!8.32e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;2.01e-73;19!UBERON:0006925;2.01e-73;19!UBERON:0002423;7.59e-56;25!UBERON:0002365;2.65e-43;31!UBERON:0002330;2.65e-43;31!UBERON:0002368;3.39e-38;33!UBERON:0000949;7.36e-28;43!UBERON:0005172;1.36e-16;52!UBERON:0005173;1.36e-16;52!UBERON:0002417;1.60e-14;58!UBERON:0000916;1.60e-14;58!UBERON:0002530;2.29e-14;57!UBERON:0001007;4.14e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.11e-73,19;UBERON:0006925,2.11e-73,19;UBERON:0008836,2.11e-73,19;UBERON:0008835,2.02e-63,22;UBERON:0003894,2.02e-63,22;UBERON:0009854,1.14e-60,23;UBERON:0007499,7.87e-56,25;UBERON:0009497,7.87e-56,25;UBERON:0000015,7.87e-56,25;UBERON:0002423,7.87e-56,25;UBERON:0006235,7.87e-56,25;UBERON:0004161,7.87e-56,25;UBERON:0009856,1.09e-53,26;UBERON:0002365,4.76e-45,31;UBERON:0002330,4.76e-45,31;UBERON:0002368,6.54e-40,35;UBERON:0000949,4.73e-31,45;UBERON:0003929,7.09e-26,54;UBERON:0005172,7.09e-26,54;UBERON:0005173,7.09e-26,54;UBERON:0002530,1.11e-23,59;UBERON:0002417,2.77e-23,60;UBERON:0000916,2.77e-23,60;UBERON:0005911,5.18e-17,82;UBERON:0001041,5.01e-16,87;UBERON:0005177,8.80e-14,101;UBERON:0009569,2.08e-12,112;UBERON:0003914,7.20e-12,117;UBERON:0004921,1.15e-11,118;UBERON:0005256,2.26e-11,122;UBERON:0001007,1.85e-09,145;UBERON:0001555,1.85e-09,145;UBERON:0007026,1.85e-09,145;UBERON:0000490,2.50e-09,148;UBERON:0001048,1.32e-08,160;UBERON:0003104,1.32e-08,160;UBERON:0009142,1.32e-08,160;UBERON:0004119,1.50e-08,160;UBERON:0000925,1.50e-08,160;UBERON:0006595,1.50e-08,160;UBERON:0000025,4.48e-07,192;UBERON:0002100,7.51e-07,199|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr1:230846000..230846009,- | |||
|id=chr1:230846000..230846009,- | |||
|ontology_enrichment_celltype=CL:0000181!9.89e-15!12;CL:0000417!9.89e-15!12;CL:0000668!9.89e-15!12;CL:0000414!9.89e-15!12;CL:0000412!9.89e-15!12;CL:0000182!9.89e-15!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.68e-65;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.84e-65,12;CL:0000223,1.22e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.08e-50;11!UBERON:0009497;2.12e-42;13!UBERON:0001041;1.41e-18;30!UBERON:0003104;6.06e-18;31!CL:0000223;4.10e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.77e-42!57;UBERON:0005068!4.77e-42!57;UBERON:0006241!4.77e-42!57;UBERON:0007135!4.77e-42!57;UBERON:0002616!4.12e-37!59;UBERON:0001017!6.75e-36!82;UBERON:0000955!1.60e-35!69;UBERON:0006238!1.60e-35!69;UBERON:0005743!6.97e-34!86;UBERON:0002780!4.21e-30!41;UBERON:0001890!4.21e-30!41;UBERON:0006240!4.21e-30!41;UBERON:0000073!5.81e-30!94;UBERON:0001016!5.81e-30!94;UBERON:0007023!1.21e-29!115;UBERON:0003080!2.82e-29!42;UBERON:0003075!1.66e-27!86;UBERON:0007284!1.66e-27!86;UBERON:0001893!1.08e-26!34;UBERON:0002346!5.83e-26!90;UBERON:0001869!2.50e-25!32;UBERON:0002791!1.60e-24!33;UBERON:0002020!9.33e-24!34;UBERON:0003528!9.33e-24!34;UBERON:0000025!4.29e-19!194;UBERON:0003056!1.13e-18!61;UBERON:0000153!1.65e-18!129;UBERON:0007811!1.65e-18!129;UBERON:0002619!1.79e-18!22;UBERON:0000033!2.65e-18!123;UBERON:0001950!5.25e-17!20;UBERON:0000956!4.89e-16!25;UBERON:0000203!4.89e-16!25;UBERON:0002107!9.78e-15!19;UBERON:0006925!9.78e-15!19;UBERON:0008836!9.78e-15!19;UBERON:0004111!1.82e-14!241;UBERON:0003076!1.03e-13!15;UBERON:0003057!1.03e-13!15;UBERON:0004121!2.38e-13!169;UBERON:0000200!3.68e-13!6;UBERON:0000924!7.24e-13!173;UBERON:0006601!7.24e-13!173;UBERON:0008835!1.80e-12!22;UBERON:0003894!1.80e-12!22;UBERON:0000477!2.45e-12!286;UBERON:0000483!2.54e-12!309;UBERON:0000119!4.19e-12!312;UBERON:0009854!7.53e-12!23;UBERON:0007499!9.38e-11!25;UBERON:0009497!9.38e-11!25;UBERON:0000015!9.38e-11!25;UBERON:0002423!9.38e-11!25;UBERON:0006235!9.38e-11!25;UBERON:0004161!9.38e-11!25;UBERON:0001871!1.77e-10!7;UBERON:0005057!2.86e-10!26;UBERON:0009856!2.86e-10!26;UBERON:0002771!3.15e-10!3;UBERON:0004733!7.58e-10!12;UBERON:0002028!7.58e-10!12;UBERON:0007277!7.58e-10!12;UBERON:0000475!1.50e-09!365;UBERON:0002420!1.68e-09!9;UBERON:0007245!1.68e-09!9;UBERON:0010009!1.68e-09!9;UBERON:0010011!1.68e-09!9;UBERON:0000454!1.68e-09!9;UBERON:0002308!2.17e-09!9;UBERON:0000125!2.17e-09!9;UBERON:0004732!4.89e-09!13;UBERON:0002368!8.61e-09!35;UBERON:0002365!2.53e-08!31;UBERON:0002330!2.53e-08!31;UBERON:0000369!2.71e-08!4;UBERON:0002435!2.71e-08!4;UBERON:0000204!2.71e-08!4;UBERON:0010082!2.71e-08!4;UBERON:0009663!4.75e-08!7;UBERON:0002298!3.94e-07!8;UBERON:0000349!4.60e-07!5;UBERON:0002021!8.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.01e-73;19!UBERON:0006925;2.01e-73;19!UBERON:0002423;7.59e-56;25!UBERON:0002365;2.65e-43;31!UBERON:0002330;2.65e-43;31!UBERON:0002368;3.39e-38;33!UBERON:0000949;7.36e-28;43!UBERON:0005172;1.36e-16;52!UBERON:0005173;1.36e-16;52!UBERON:0002417;1.60e-14;58!UBERON:0000916;1.60e-14;58!UBERON:0002530;2.29e-14;57!UBERON:0001007;4.14e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.11e-73,19;UBERON:0006925,2.11e-73,19;UBERON:0008836,2.11e-73,19;UBERON:0008835,2.02e-63,22;UBERON:0003894,2.02e-63,22;UBERON:0009854,1.14e-60,23;UBERON:0007499,7.87e-56,25;UBERON:0009497,7.87e-56,25;UBERON:0000015,7.87e-56,25;UBERON:0002423,7.87e-56,25;UBERON:0006235,7.87e-56,25;UBERON:0004161,7.87e-56,25;UBERON:0009856,1.09e-53,26;UBERON:0002365,4.76e-45,31;UBERON:0002330,4.76e-45,31;UBERON:0002368,6.54e-40,35;UBERON:0000949,4.73e-31,45;UBERON:0003929,7.09e-26,54;UBERON:0005172,7.09e-26,54;UBERON:0005173,7.09e-26,54;UBERON:0002530,1.11e-23,59;UBERON:0002417,2.77e-23,60;UBERON:0000916,2.77e-23,60;UBERON:0005911,5.18e-17,82;UBERON:0001041,5.01e-16,87;UBERON:0005177,8.80e-14,101;UBERON:0009569,2.08e-12,112;UBERON:0003914,7.20e-12,117;UBERON:0004921,1.15e-11,118;UBERON:0005256,2.26e-11,122;UBERON:0001007,1.85e-09,145;UBERON:0001555,1.85e-09,145;UBERON:0007026,1.85e-09,145;UBERON:0000490,2.50e-09,148;UBERON:0001048,1.32e-08,160;UBERON:0003104,1.32e-08,160;UBERON:0009142,1.32e-08,160;UBERON:0004119,1.50e-08,160;UBERON:0000925,1.50e-08,160;UBERON:0006595,1.50e-08,160;UBERON:0000025,4.48e-07,192;UBERON:0002100,7.51e-07,199 | |||
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|short_description=p@chr1:230846000..230846009,- | |||
}} | |||
Revision as of 04:11, 12 September 2013
| Short description: | p@chr1:230846000..230846009, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:230846000..230846009, - |
| Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 2.84e-65 | 12 |
| endodermal cell | 1.22e-13 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
