FFCP PHASE1:Hg19::chr1:57035544..57035561,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C84|description=CAGE_peak_at_chr1:57035544..57035561,-|id=chr1:57035544..57035561,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000135;1.17e-08;3!CL:0000388;1.17e-08;3!CL:0000182;2.65e-08;12|ontology_enrichment_celltype_v019_2=CL:0000135,1.04e-08,3;CL:0000388,1.04e-08,3;CL:0000182,3.07e-08,12|ontology_enrichment_development_v019=UBERON:0004161;5.63e-09;11!UBERON:0009497;9.84e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;2.45e-12;2!DOID:5093;8.37e-07;4!DOID:1612;8.37e-07;4|ontology_enrichment_disease_v019_2=DOID:3307,1.65e-12,2;DOID:5093,7.27e-07,4;DOID:1612,7.27e-07,4|ontology_enrichment_uberon=UBERON:0003135!1.35e-09!11;UBERON:0003101!2.10e-07!22;UBERON:0000079!2.10e-07!22|ontology_enrichment_uberon_v019=UBERON:0002107;4.29e-11;19!UBERON:0006925;4.29e-11;19!UBERON:0007846;1.17e-08;3!UBERON:0000043;1.17e-08;3!UBERON:0007845;1.17e-08;3!UBERON:0002423;1.39e-08;25!UBERON:0002365;6.63e-07;31!UBERON:0002330;6.63e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.84e-11,19;UBERON:0006925,4.84e-11,19;UBERON:0008836,4.84e-11,19;UBERON:0008835,1.27e-09,22;UBERON:0003894,1.27e-09,22;UBERON:0009854,3.12e-09,23;UBERON:0007846,1.04e-08,3;UBERON:0000043,1.04e-08,3;UBERON:0007845,1.04e-08,3;UBERON:0007499,1.53e-08,25;UBERON:0009497,1.53e-08,25;UBERON:0000015,1.53e-08,25;UBERON:0002423,1.53e-08,25;UBERON:0006235,1.53e-08,25;UBERON:0004161,1.53e-08,25;UBERON:0009856,3.08e-08,26;UBERON:0002365,5.30e-07,31;UBERON:0002330,5.30e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,1.0429658368404,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0.969332746095218,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,8.58314238183864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.782205530939212,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0,0,1.16495949527454,0,0.247247575143499,0.26961417541674,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0.211200673038813,0,0,0,0,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0.430227358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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr1:57035544..57035561,- | |||
|id=chr1:57035544..57035561,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.17e-08;3!CL:0000388;1.17e-08;3!CL:0000182;2.65e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.04e-08,3;CL:0000388,1.04e-08,3;CL:0000182,3.07e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.63e-09;11!UBERON:0009497;9.84e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.45e-12;2!DOID:5093;8.37e-07;4!DOID:1612;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.65e-12,2;DOID:5093,7.27e-07,4;DOID:1612,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.35e-09!11;UBERON:0003101!2.10e-07!22;UBERON:0000079!2.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.29e-11;19!UBERON:0006925;4.29e-11;19!UBERON:0007846;1.17e-08;3!UBERON:0000043;1.17e-08;3!UBERON:0007845;1.17e-08;3!UBERON:0002423;1.39e-08;25!UBERON:0002365;6.63e-07;31!UBERON:0002330;6.63e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.84e-11,19;UBERON:0006925,4.84e-11,19;UBERON:0008836,4.84e-11,19;UBERON:0008835,1.27e-09,22;UBERON:0003894,1.27e-09,22;UBERON:0009854,3.12e-09,23;UBERON:0007846,1.04e-08,3;UBERON:0000043,1.04e-08,3;UBERON:0007845,1.04e-08,3;UBERON:0007499,1.53e-08,25;UBERON:0009497,1.53e-08,25;UBERON:0000015,1.53e-08,25;UBERON:0002423,1.53e-08,25;UBERON:0006235,1.53e-08,25;UBERON:0004161,1.53e-08,25;UBERON:0009856,3.08e-08,26;UBERON:0002365,5.30e-07,31;UBERON:0002330,5.30e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,1.0429658368404,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0.969332746095218,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,8.58314238183864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.782205530939212,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0,0,1.16495949527454,0,0.247247575143499,0.26961417541674,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0.211200673038813,0,0,0,0,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0.432626562123789,0,0.109265571963696,0.126698501011437,0.407955318967927,0.534434810531121,0,0.250707539292375,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.808468755832877,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:57035544..57035561,- | |||
}} |
Revision as of 06:13, 12 September 2013
Short description: | p@chr1:57035544..57035561, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:57035544..57035561, - |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.04e-08 | 3 |
tendon cell | 1.04e-08 | 3 |
hepatocyte | 3.07e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.84e-11 | 19 |
digestive gland | 4.84e-11 | 19 |
liver bud | 4.84e-11 | 19 |
hepatic diverticulum | 1.27e-09 | 22 |
liver primordium | 1.27e-09 | 22 |
digestive tract diverticulum | 3.12e-09 | 23 |
dense regular connective tissue | 1.04e-08 | 3 |
tendon | 1.04e-08 | 3 |
regular connective tissue | 1.04e-08 | 3 |
epithelial sac | 1.53e-08 | 25 |
epithelium of foregut-midgut junction | 1.53e-08 | 25 |
anatomical boundary | 1.53e-08 | 25 |
hepatobiliary system | 1.53e-08 | 25 |
foregut-midgut junction | 1.53e-08 | 25 |
septum transversum | 1.53e-08 | 25 |
sac | 3.08e-08 | 26 |
exocrine gland | 5.30e-07 | 31 |
exocrine system | 5.30e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.65e-12 | 2 |
thoracic cancer | 7.27e-07 | 4 |
breast cancer | 7.27e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.