FFCP PHASE1:Hg19::chr1:63787320..63787340,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-120bp_to_ENST00000426393_5end|coexpression_cluster_id=C49|description=CAGE_peak_2_at_ENST00000426393_5end|id=chr1:63787320..63787340,-|ontology_enrichment_celltype=CL:0002322!3.23e-52!5;CL:0000039!1.06e-24!7;CL:0000586!1.06e-24!7;CL:0000540!6.58e-17!6;CL:0000031!6.58e-17!6;CL:0000404!6.58e-17!6;CL:0000047!7.91e-13!8;CL:0000148!5.12e-10!10;CL:0000541!5.12e-10!10;CL:0000133!7.78e-08!59;CL:0000147!2.68e-07!14|ontology_enrichment_celltype_v019=CL:0002322;8.32e-75;5!CL:0000039;2.57e-35;7!CL:0000586;2.57e-35;7!CL:0002321;4.05e-25;15!CL:0000540;5.11e-24;6!CL:0000404;5.11e-24;6!CL:0000148;3.76e-14;10!CL:0000147;2.76e-10;14!CL:0000710;2.29e-07;20|ontology_enrichment_celltype_v019_2=CL:0002322,7.71e-75,5;CL:0000039,2.57e-35,7;CL:0000586,2.57e-35,7;CL:0000540,5.31e-24,6;CL:0000031,5.31e-24,6;CL:0000404,5.31e-24,6;CL:0000047,3.51e-18,8;CL:0000148,3.67e-14,10;CL:0000541,3.67e-14,10;CL:0000147,2.71e-10,14;CL:0000133,8.22e-09,59;CL:0000710,2.26e-07,20;CL:0000221,3.27e-07,72|ontology_enrichment_development_v019=UBERON:0009117;7.23e-25;10!UBERON:0005564;7.23e-25;10!CL:0000031;5.11e-24;6|ontology_enrichment_disease=DOID:3095!1.09e-22!22;DOID:2994!1.09e-22!22|ontology_enrichment_disease_v019=DOID:3095;1.68e-11;22!DOID:2994;1.68e-11;22|ontology_enrichment_disease_v019_2=DOID:3095,1.68e-11,22;DOID:2994,1.68e-11,22|ontology_enrichment_uberon=UBERON:0000473!1.18e-21!8;UBERON:0003135!7.87e-16!11;UBERON:0000991!1.43e-12!21;UBERON:0009196!1.43e-12!21;UBERON:0009117!1.43e-12!21;UBERON:0005564!1.43e-12!21;UBERON:0004176!5.37e-12!22;UBERON:0006834!1.81e-11!1;UBERON:0003101!5.15e-08!22;UBERON:0000079!5.15e-08!22;UBERON:0003133!1.64e-07!48;UBERON:0004458!2.25e-07!49|ontology_enrichment_uberon_v019=UBERON:0000473;5.77e-31;8!UBERON:0003135;1.20e-22;11!UBERON:0000922;2.94e-15;49!UBERON:0000991;4.93e-12;21!UBERON:0003101;1.68e-11;22!UBERON:0000079;1.68e-11;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.77e-31,8;UBERON:0003135,1.20e-22,11;UBERON:0000991,4.93e-12,21;UBERON:0009196,4.93e-12,21;UBERON:0009117,4.93e-12,21;UBERON:0005564,4.93e-12,21;UBERON:0004176,1.68e-11,22;UBERON:0003101,1.68e-11,22;UBERON:0000079,1.68e-11,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.978555502977,10.0722623924329,11.6193942869518,7.67091807113741,7.31730467539322,8.39447925874409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8834332169092,40.7116732327812,40.7131531268601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0,25.8031739247214,16.0330443159336,34.9200618232411,11.0311317288645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p2@ENST00000426393}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-120bp_to_ENST00000426393_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_ENST00000426393_5end | |||
|id=chr1:63787320..63787340,- | |||
|ontology_enrichment_celltype=CL:0002322!3.23e-52!5;CL:0000039!1.06e-24!7;CL:0000586!1.06e-24!7;CL:0000540!6.58e-17!6;CL:0000031!6.58e-17!6;CL:0000404!6.58e-17!6;CL:0000047!7.91e-13!8;CL:0000148!5.12e-10!10;CL:0000541!5.12e-10!10;CL:0000133!7.78e-08!59;CL:0000147!2.68e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.32e-75;5!CL:0000039;2.57e-35;7!CL:0000586;2.57e-35;7!CL:0002321;4.05e-25;15!CL:0000540;5.11e-24;6!CL:0000404;5.11e-24;6!CL:0000148;3.76e-14;10!CL:0000147;2.76e-10;14!CL:0000710;2.29e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.71e-75,5;CL:0000039,2.57e-35,7;CL:0000586,2.57e-35,7;CL:0000540,5.31e-24,6;CL:0000031,5.31e-24,6;CL:0000404,5.31e-24,6;CL:0000047,3.51e-18,8;CL:0000148,3.67e-14,10;CL:0000541,3.67e-14,10;CL:0000147,2.71e-10,14;CL:0000133,8.22e-09,59;CL:0000710,2.26e-07,20;CL:0000221,3.27e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.23e-25;10!UBERON:0005564;7.23e-25;10!CL:0000031;5.11e-24;6 | |||
|ontology_enrichment_disease=DOID:3095!1.09e-22!22;DOID:2994!1.09e-22!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.68e-11;22!DOID:2994;1.68e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.68e-11,22;DOID:2994,1.68e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.18e-21!8;UBERON:0003135!7.87e-16!11;UBERON:0000991!1.43e-12!21;UBERON:0009196!1.43e-12!21;UBERON:0009117!1.43e-12!21;UBERON:0005564!1.43e-12!21;UBERON:0004176!5.37e-12!22;UBERON:0006834!1.81e-11!1;UBERON:0003101!5.15e-08!22;UBERON:0000079!5.15e-08!22;UBERON:0003133!1.64e-07!48;UBERON:0004458!2.25e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.77e-31;8!UBERON:0003135;1.20e-22;11!UBERON:0000922;2.94e-15;49!UBERON:0000991;4.93e-12;21!UBERON:0003101;1.68e-11;22!UBERON:0000079;1.68e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.77e-31,8;UBERON:0003135,1.20e-22,11;UBERON:0000991,4.93e-12,21;UBERON:0009196,4.93e-12,21;UBERON:0009117,4.93e-12,21;UBERON:0005564,4.93e-12,21;UBERON:0004176,1.68e-11,22;UBERON:0003101,1.68e-11,22;UBERON:0000079,1.68e-11,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.978555502977,10.0722623924329,11.6193942869518,7.67091807113741,7.31730467539322,8.39447925874409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8834332169092,40.7116732327812,40.7131531268601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0,25.8031739247214,16.0330443159336,34.9200618232411,11.0311317288645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@ENST00000426393 | |||
}} |
Revision as of 06:23, 12 September 2013
Short description: | p2@ENST00000426393 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000426393_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -120bp_to_ENST00000426393_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.71e-75 | 5 |
germ line cell | 2.57e-35 | 7 |
germ cell | 2.57e-35 | 7 |
neuron | 5.31e-24 | 6 |
neuroblast | 5.31e-24 | 6 |
electrically signaling cell | 5.31e-24 | 6 |
neuronal stem cell | 3.51e-18 | 8 |
melanocyte | 3.67e-14 | 10 |
melanoblast | 3.67e-14 | 10 |
pigment cell | 2.71e-10 | 14 |
neurectodermal cell | 8.22e-09 | 59 |
neurecto-epithelial cell | 2.26e-07 | 20 |
ectodermal cell | 3.27e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 5.77e-31 | 8 |
male reproductive organ | 1.20e-22 | 11 |
gonad | 4.93e-12 | 21 |
indifferent external genitalia | 4.93e-12 | 21 |
indifferent gonad | 4.93e-12 | 21 |
gonad primordium | 4.93e-12 | 21 |
external genitalia | 1.68e-11 | 22 |
male organism | 1.68e-11 | 22 |
male reproductive system | 1.68e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.68e-11 | 22 |
germ cell cancer | 1.68e-11 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.