FFCP PHASE1:Hg19::chr1:6418966..6419024,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24157|TSSclassifier=S|UniProt=O00154|association_with_transcript=0bp_to_NM_181866,uc001amq.2_5end|coexpression_cluster_id=C54|description=CAGE_peak_8_at_ACOT7_5end|id=chr1:6418966..6419024,-|ontology_enrichment_celltype=CL:0000222!6.88e-12!119;CL:0000213!8.61e-10!57;CL:0000215!8.61e-10!57;CL:0002139!7.55e-09!24;CL:0000115!4.19e-07!35;CL:0002078!7.20e-07!44|ontology_enrichment_celltype_v019=CL:0002139;4.33e-10;24!CL:1000413;6.29e-09;9!CL:0002595;2.14e-08;5!CL:0000163;9.22e-08;9!CL:0000840;1.02e-07;5!CL:0000359;2.64e-07;32!CL:0000115;4.43e-07;36!CL:0000071;5.99e-07;18|ontology_enrichment_celltype_v019_2=CL:0000222,1.95e-12,121;CL:0000213,8.17e-11,58;CL:0000215,8.17e-11,58;CL:0002139,3.96e-10,24;CL:1000413,5.74e-09,9;CL:0002078,2.41e-08,45;CL:0000115,2.48e-08,36;CL:0002595,2.80e-08,5;CL:0000359,6.61e-08,32;CL:0002321,8.21e-08,250;CL:0000163,9.18e-08,9;CL:0000840,1.04e-07,5;CL:0001029,1.04e-07,5;CL:0000071,5.02e-07,18;CL:0002546,5.02e-07,18;CL:0000076,5.87e-07,63|ontology_enrichment_development_v019=CL:0002546;5.99e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!1.81e-14!69;UBERON:0001981!9.54e-13!60;UBERON:0007500!9.54e-13!60;UBERON:0004537!9.54e-13!60;UBERON:0006965!9.54e-13!60;UBERON:0004872!1.22e-12!84;UBERON:0003914!5.25e-12!118;UBERON:0002049!5.11e-11!79;UBERON:0007798!5.11e-11!79;UBERON:0004535!1.18e-10!110;UBERON:0000477!5.58e-10!286;UBERON:0001009!9.09e-10!113;UBERON:0004111!1.02e-09!241;UBERON:0001637!1.37e-09!42;UBERON:0003509!1.37e-09!42;UBERON:0004572!1.37e-09!42;UBERON:0000025!1.39e-08!194;UBERON:0004573!7.89e-08!33;UBERON:0004571!7.89e-08!33;UBERON:0000490!4.79e-07!138|ontology_enrichment_uberon_v019=UBERON:0000055;3.23e-11;65!UBERON:0001637;1.24e-10;42!UBERON:0003509;1.24e-10;42!UBERON:0004572;1.24e-10;42!UBERON:0003513;2.62e-10;7!UBERON:0003915;6.29e-09;9!UBERON:0004700;6.29e-09;9!UBERON:0001917;6.29e-09;9!UBERON:0004573;7.70e-09;33!UBERON:0004571;7.70e-09;33!UBERON:0007500;1.88e-08;56!UBERON:0001981;1.88e-08;56!UBERON:0004537;1.88e-08;56!UBERON:0003834;2.14e-08;5!UBERON:0001533;2.14e-08;5!UBERON:0004638;5.99e-07;18!UBERON:0001986;5.99e-07;18!UBERON:0004852;5.99e-07;18!UBERON:0002049;9.08e-07;75!UBERON:0007798;9.08e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.21e-17,68;UBERON:0007500,1.85e-14,59;UBERON:0001981,1.85e-14,59;UBERON:0004537,1.85e-14,59;UBERON:0006965,1.85e-14,59;UBERON:0002049,9.07e-14,78;UBERON:0007798,9.07e-14,78;UBERON:0001637,2.89e-12,42;UBERON:0003509,2.89e-12,42;UBERON:0004572,2.89e-12,42;UBERON:0004872,5.30e-11,83;UBERON:0003513,2.80e-10,7;UBERON:0004573,7.25e-10,33;UBERON:0004571,7.25e-10,33;UBERON:0004535,9.13e-10,109;UBERON:0001009,3.18e-09,112;UBERON:0003915,5.74e-09,9;UBERON:0004700,5.74e-09,9;UBERON:0001917,5.74e-09,9;UBERON:0003914,7.17e-09,117;UBERON:0003834,2.80e-08,5;UBERON:0001533,2.80e-08,5;UBERON:0004111,1.56e-07,240;UBERON:0004638,5.02e-07,18;UBERON:0001986,5.02e-07,18;UBERON:0004852,5.02e-07,18;UBERON:0000025,8.39e-07,192|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0.993374274723366,0.738905305049512,0.472264687882075,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0.739508020333575,0,0,0.293600439334847,0,0,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0,0.983548850569165,0.393010762749165,1.64481199199607,0,0,0,0,0,0.883817722424512,1.10766947291811,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.339928028092699,0.766440987203842,1.03088233644789,1.01207876807801,1.27426165729639,0,0,0.451725357233318,0.383959833463255,0,0.947109008176067,0,0.403213486449465,0.534880391567015,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0,0.289693037921647,3.9764297352555,0,0,0,0.087834785693126,1.76821751921912,1.09288586487763,0.741568885568859,76.2686375088506,95.0748365653999,107.562990059762,0.953962497221368,0,0,2.38514888840046,1.72046919021225,1.38856200643038,2.26123176769604,2.93649605346934,3.57653454522088,3.9709043641994,0.516833518338658,1.42306505074684,1.00416183829401,0.402829317109147,1.52054421143703,2.4406205754817,0,2.43042584364528,0.17859945656816,0.44905874525234,0.450445921933289,1.53316637465883,0,0.732806975721629,0,0,3.05265836499774,0.496971951695318,0.506522046658319,0.264818361626438,0,0,0.560677600142307,1.06748995729705,13.3200476145266,0.311211035399766,0.942974704487816,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0,2.37600571456411,0.741800787835671,0,2.15585442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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24157 | |||
|TSSclassifier=S | |||
|UniProt=O00154 | |||
|association_with_transcript=0bp_to_NM_181866,uc001amq.2_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_8_at_ACOT7_5end | |||
|id=chr1:6418966..6419024,- | |||
|ontology_enrichment_celltype=CL:0000222!6.88e-12!119;CL:0000213!8.61e-10!57;CL:0000215!8.61e-10!57;CL:0002139!7.55e-09!24;CL:0000115!4.19e-07!35;CL:0002078!7.20e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.33e-10;24!CL:1000413;6.29e-09;9!CL:0002595;2.14e-08;5!CL:0000163;9.22e-08;9!CL:0000840;1.02e-07;5!CL:0000359;2.64e-07;32!CL:0000115;4.43e-07;36!CL:0000071;5.99e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.95e-12,121;CL:0000213,8.17e-11,58;CL:0000215,8.17e-11,58;CL:0002139,3.96e-10,24;CL:1000413,5.74e-09,9;CL:0002078,2.41e-08,45;CL:0000115,2.48e-08,36;CL:0002595,2.80e-08,5;CL:0000359,6.61e-08,32;CL:0002321,8.21e-08,250;CL:0000163,9.18e-08,9;CL:0000840,1.04e-07,5;CL:0001029,1.04e-07,5;CL:0000071,5.02e-07,18;CL:0002546,5.02e-07,18;CL:0000076,5.87e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;5.99e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.81e-14!69;UBERON:0001981!9.54e-13!60;UBERON:0007500!9.54e-13!60;UBERON:0004537!9.54e-13!60;UBERON:0006965!9.54e-13!60;UBERON:0004872!1.22e-12!84;UBERON:0003914!5.25e-12!118;UBERON:0002049!5.11e-11!79;UBERON:0007798!5.11e-11!79;UBERON:0004535!1.18e-10!110;UBERON:0000477!5.58e-10!286;UBERON:0001009!9.09e-10!113;UBERON:0004111!1.02e-09!241;UBERON:0001637!1.37e-09!42;UBERON:0003509!1.37e-09!42;UBERON:0004572!1.37e-09!42;UBERON:0000025!1.39e-08!194;UBERON:0004573!7.89e-08!33;UBERON:0004571!7.89e-08!33;UBERON:0000490!4.79e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;3.23e-11;65!UBERON:0001637;1.24e-10;42!UBERON:0003509;1.24e-10;42!UBERON:0004572;1.24e-10;42!UBERON:0003513;2.62e-10;7!UBERON:0003915;6.29e-09;9!UBERON:0004700;6.29e-09;9!UBERON:0001917;6.29e-09;9!UBERON:0004573;7.70e-09;33!UBERON:0004571;7.70e-09;33!UBERON:0007500;1.88e-08;56!UBERON:0001981;1.88e-08;56!UBERON:0004537;1.88e-08;56!UBERON:0003834;2.14e-08;5!UBERON:0001533;2.14e-08;5!UBERON:0004638;5.99e-07;18!UBERON:0001986;5.99e-07;18!UBERON:0004852;5.99e-07;18!UBERON:0002049;9.08e-07;75!UBERON:0007798;9.08e-07;75 | |||
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| |||
|short_description=p8@ACOT7 | |||
}} |
Revision as of 06:24, 12 September 2013
Short description: | p8@ACOT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ACOT7_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_NM_181866, uc001amq.2_5end |
EntrezGene: | ACOT7 |
HGNC: | 24157 |
UniProt: | O00154 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.95e-12 | 121 |
lining cell | 8.17e-11 | 58 |
barrier cell | 8.17e-11 | 58 |
endothelial cell of vascular tree | 3.96e-10 | 24 |
endothelial cell of artery | 5.74e-09 | 9 |
meso-epithelial cell | 2.41e-08 | 45 |
endothelial cell | 2.48e-08 | 36 |
smooth muscle cell of the subclavian artery | 2.80e-08 | 5 |
vascular associated smooth muscle cell | 6.61e-08 | 32 |
embryonic cell | 8.21e-08 | 250 |
endocrine cell | 9.18e-08 | 9 |
immature conventional dendritic cell | 1.04e-07 | 5 |
common dendritic progenitor | 1.04e-07 | 5 |
blood vessel endothelial cell | 5.02e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.02e-07 | 18 |
squamous epithelial cell | 5.87e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.21e-17 | 68 |
epithelial tube open at both ends | 1.85e-14 | 59 |
blood vessel | 1.85e-14 | 59 |
blood vasculature | 1.85e-14 | 59 |
vascular cord | 1.85e-14 | 59 |
vasculature | 9.07e-14 | 78 |
vascular system | 9.07e-14 | 78 |
artery | 2.89e-12 | 42 |
arterial blood vessel | 2.89e-12 | 42 |
arterial system | 2.89e-12 | 42 |
splanchnic layer of lateral plate mesoderm | 5.30e-11 | 83 |
trunk blood vessel | 2.80e-10 | 7 |
systemic artery | 7.25e-10 | 33 |
systemic arterial system | 7.25e-10 | 33 |
cardiovascular system | 9.13e-10 | 109 |
circulatory system | 3.18e-09 | 112 |
endothelial tube | 5.74e-09 | 9 |
arterial system endothelium | 5.74e-09 | 9 |
endothelium of artery | 5.74e-09 | 9 |
epithelial tube | 7.17e-09 | 117 |
thoracic segment blood vessel | 2.80e-08 | 5 |
subclavian artery | 2.80e-08 | 5 |
anatomical conduit | 1.56e-07 | 240 |
blood vessel endothelium | 5.02e-07 | 18 |
endothelium | 5.02e-07 | 18 |
cardiovascular system endothelium | 5.02e-07 | 18 |
tube | 8.39e-07 | 192 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.