Personal tools

Coexpression cluster:C54

From FANTOM5_SSTAR

Jump to: navigation, search


Full id: C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature



Phase1 CAGE Peaks

  Short description
Hg19::chr10:100204220..100204230,- p@chr10:100204220..100204230
-
Hg19::chr10:104338730..104338756,+ p@chr10:104338730..104338756
+
Hg19::chr10:119014647..119014658,+ p@chr10:119014647..119014658
+
Hg19::chr10:119014661..119014665,+ p@chr10:119014661..119014665
+
Hg19::chr10:127738449..127738456,- p@chr10:127738449..127738456
-
Hg19::chr10:127738483..127738488,- p@chr10:127738483..127738488
-
Hg19::chr10:127738495..127738498,- p@chr10:127738495..127738498
-
Hg19::chr10:127738503..127738517,- p@chr10:127738503..127738517
-
Hg19::chr10:127738525..127738534,- p@chr10:127738525..127738534
-
Hg19::chr10:127738551..127738554,- p@chr10:127738551..127738554
-
Hg19::chr10:127738567..127738604,- p@chr10:127738567..127738604
-
Hg19::chr10:29844110..29844136,- p18@SVIL
Hg19::chr10:46048728..46048735,- p@chr10:46048728..46048735
-
Hg19::chr10:46048740..46048751,- p@chr10:46048740..46048751
-
Hg19::chr10:49860332..49860349,- p6@ARHGAP22
Hg19::chr10:49893243..49893306,+ p3@WDFY4
Hg19::chr10:49893502..49893519,+ p4@WDFY4
Hg19::chr10:49917757..49917760,+ p5@WDFY4
Hg19::chr10:64399026..64399035,- p@chr10:64399026..64399035
-
Hg19::chr10:64564798..64564848,+ p4@ADO
Hg19::chr10:64565761..64565780,- p2@ENST00000425290
Hg19::chr10:90973138..90973160,- p@chr10:90973138..90973160
-
Hg19::chr10:90973385..90973402,- p@chr10:90973385..90973402
-
Hg19::chr10:90973438..90973461,- p@chr10:90973438..90973461
-
Hg19::chr10:90973564..90973577,- p@chr10:90973564..90973577
-
Hg19::chr10:90973582..90973594,- p@chr10:90973582..90973594
-
Hg19::chr10:90973608..90973618,- p@chr10:90973608..90973618
-
Hg19::chr10:90973672..90973683,- p@chr10:90973672..90973683
-
Hg19::chr10:90973762..90973771,- p@chr10:90973762..90973771
-
Hg19::chr10:90974002..90974011,- p@chr10:90974002..90974011
-
Hg19::chr10:90974245..90974254,- p@chr10:90974245..90974254
-
Hg19::chr10:90974302..90974318,- p@chr10:90974302..90974318
-
Hg19::chr10:90974368..90974396,- p@chr10:90974368..90974396
-
Hg19::chr10:90974443..90974454,- p@chr10:90974443..90974454
-
Hg19::chr10:90974462..90974478,- p@chr10:90974462..90974478
-
Hg19::chr10:90974488..90974495,- p@chr10:90974488..90974495
-
Hg19::chr10:90974582..90974590,- p@chr10:90974582..90974590
-
Hg19::chr10:90974591..90974623,- p@chr10:90974591..90974623
-
Hg19::chr10:90974639..90974650,- p@chr10:90974639..90974650
-
Hg19::chr10:90974750..90974762,- p@chr10:90974750..90974762
-
Hg19::chr10:90975757..90975768,- p@chr10:90975757..90975768
-
Hg19::chr10:90983491..90983502,- p15@LIPA
Hg19::chr10:90983516..90983545,- p9@LIPA
Hg19::chr10:90983566..90983579,- p14@LIPA
Hg19::chr10:90984900..90984932,- p8@LIPA
Hg19::chr10:90984960..90985007,- p7@LIPA
Hg19::chr10:90986735..90986753,- p@chr10:90986735..90986753
-
Hg19::chr10:90986757..90986768,- p@chr10:90986757..90986768
-
Hg19::chr10:90987988..90988002,- p@chr10:90987988..90988002
-
Hg19::chr10:90988013..90988023,- p@chr10:90988013..90988023
-
Hg19::chr10:90988035..90988053,- p@chr10:90988035..90988053
-
Hg19::chr10:90988063..90988075,- p@chr10:90988063..90988075
-
Hg19::chr10:90988088..90988122,- p@chr10:90988088..90988122
-
Hg19::chr10:91005509..91005551,- p@chr10:91005509..91005551
-
Hg19::chr10:91007323..91007347,- p11@LIPA
Hg19::chr10:91007364..91007388,- p12@LIPA
Hg19::chr10:91008780..91008814,- p@chr10:91008780..91008814
-
Hg19::chr10:91011525..91011541,- p2@LIPA
Hg19::chr10:91011548..91011636,- p1@LIPA
Hg19::chr11:102734908..102734911,- p@chr11:102734908..102734911
-
Hg19::chr11:102742411..102742449,- p@chr11:102742411..102742449
-
Hg19::chr11:102742640..102742679,- p@chr11:102742640..102742679
-
Hg19::chr11:102745704..102745720,- p1@MMP12
Hg19::chr11:117057817..117057863,+ p27@SIDT2
Hg19::chr11:1870362..1870366,- p@chr11:1870362..1870366
-
Hg19::chr11:1870376..1870388,- p@chr11:1870376..1870388
-
Hg19::chr11:1870461..1870472,+ p@chr11:1870461..1870472
+
Hg19::chr11:1870494..1870502,+ p@chr11:1870494..1870502
+
Hg19::chr11:62496376..62496420,+ p5@TTC9C
Hg19::chr11:62496425..62496434,+ p8@TTC9C
Hg19::chr11:7544914..7544928,+ p@chr11:7544914..7544928
+
Hg19::chr11:7544941..7544949,+ p@chr11:7544941..7544949
+
Hg19::chr11:96032868..96032879,- p@chr11:96032868..96032879
-
Hg19::chr11:96032916..96032925,- p@chr11:96032916..96032925
-
Hg19::chr12:12764947..12764986,+ p2@CREBL2
Hg19::chr12:12764995..12765017,+ p3@CREBL2
Hg19::chr12:133404969..133404985,- p11@GOLGA3
Hg19::chr12:15699302..15699354,+ p3@PTPRO
Hg19::chr12:15699539..15699569,+ p2@PTPRO
Hg19::chr12:15699573..15699617,+ p6@PTPRO
Hg19::chr12:1725865..1725884,+ p7@WNT5B
Hg19::chr12:51403047..51403061,- p5@SLC11A2
Hg19::chr12:8276495..8276523,+ p4@CLEC4A
Hg19::chr12:8278143..8278154,+ p@chr12:8278143..8278154
+
Hg19::chr13:50125637..50125647,- p@chr13:50125637..50125647
-
Hg19::chr13:52733249..52733254,+ p@chr13:52733249..52733254
+
Hg19::chr14:106071504..106071518,- p1@ENST00000390540
Hg19::chr14:24099350..24099380,+ p3@DHRS2
Hg19::chr14:55590616..55590617,+ p33@LGALS3
Hg19::chr14:55590646..55590689,+ p2@LGALS3
Hg19::chr14:61449076..61449109,+ p12@SLC38A6
Hg19::chr14:61452664..61452679,+ p@chr14:61452664..61452679
+
Hg19::chr14:61452692..61452701,+ p@chr14:61452692..61452701
+
Hg19::chr14:76071818..76071827,+ p14@FLVCR2
Hg19::chr14:76071847..76071857,+ p8@FLVCR2
Hg19::chr14:90527075..90527088,+ p@chr14:90527075..90527088
+
Hg19::chr14:90527557..90527602,+ p@chr14:90527557..90527602
+
Hg19::chr14:90528333..90528366,+ p1@KCNK13
Hg19::chr14:91019196..91019216,- -
p@chr14:91019196..91019216
Hg19::chr15:101529373..101529387,+ p@chr15:101529373..101529387
+
Hg19::chr15:45454976..45454985,+ p@chr15:45454976..45454985
+
Hg19::chr15:45879920..45879963,+ p7@PLDN
Hg19::chr15:58401896..58401913,+ p@chr15:58401896..58401913
+
Hg19::chr15:73978556..73978566,+ p@chr15:73978556..73978566
+
Hg19::chr15:78598854..78598866,- p@chr15:78598854..78598866
-
Hg19::chr15:99943910..99943923,- p@chr15:99943910..99943923
-
Hg19::chr16:31141328..31141350,+ p2@KAT8
Hg19::chr16:5070578..5070590,- p@chr16:5070578..5070590
-
Hg19::chr16:5070595..5070602,- p@chr16:5070595..5070602
-
Hg19::chr16:57397571..57397582,- p5@CU693343
Hg19::chr16:57397666..57397694,- p2@CU693343
Hg19::chr16:57397735..57397758,- p3@CU693343
Hg19::chr16:57397953..57397960,- p8@CU693343
Hg19::chr16:57398251..57398254,+ p@chr16:57398251..57398254
+
Hg19::chr16:57398312..57398334,- p@chr16:57398312..57398334
-
Hg19::chr16:57398336..57398358,+ p@chr16:57398336..57398358
+
Hg19::chr16:57398353..57398367,- p@chr16:57398353..57398367
-
Hg19::chr16:57398663..57398698,+ p@chr16:57398663..57398698
+
Hg19::chr16:57398987..57399006,+ p@chr16:57398987..57399006
+
Hg19::chr16:57399022..57399038,+ p@chr16:57399022..57399038
+
Hg19::chr16:57399043..57399070,+ p@chr16:57399043..57399070
+
Hg19::chr16:57399108..57399115,+ p@chr16:57399108..57399115
+
Hg19::chr16:57447773..57447787,+ p1@CCL17
Hg19::chr16:57449765..57449776,- p@chr16:57449765..57449776
-
Hg19::chr16:57449972..57449973,- p@chr16:57449972..57449973
-
Hg19::chr17:26961255..26961266,- p@chr17:26961255..26961266
-
Hg19::chr17:26970937..26970956,- p2@KIAA0100
Hg19::chr17:26970962..26970974,- p5@KIAA0100
Hg19::chr17:26971102..26971126,- p@chr17:26971102..26971126
-
Hg19::chr17:27441247..27441267,- p11@MYO18A
Hg19::chr17:27441287..27441300,- p16@MYO18A
Hg19::chr17:32683456..32683467,+ p2@CCL13
Hg19::chr17:32683491..32683506,+ p1@CCL13
Hg19::chr17:3704456..3704468,- p3@ITGAE
Hg19::chr17:4544965..4544979,- p1@ALOX15
Hg19::chr17:4545190..4545199,- p4@ALOX15
Hg19::chr17:46058415..46058422,+ p@chr17:46058415..46058422
+
Hg19::chr17:46058427..46058445,+ p@chr17:46058427..46058445
+
Hg19::chr17:46058446..46058447,+ p@chr17:46058446..46058447
+
Hg19::chr17:46058452..46058468,+ p@chr17:46058452..46058468
+
Hg19::chr17:5138079..5138093,- p2@SCIMP
Hg19::chr17:5138215..5138285,+ p@chr17:5138215..5138285
+
Hg19::chr17:58499737..58499752,- p@chr17:58499737..58499752
-
Hg19::chr17:58499766..58499803,- p@chr17:58499766..58499803
-
Hg19::chr17:67125340..67125350,- p@chr17:67125340..67125350
-
Hg19::chr17:67125354..67125365,- p@chr17:67125354..67125365
-
Hg19::chr17:6982145..6982156,- p1@CU691636
Hg19::chr17:6982162..6982170,- p2@CU691636
Hg19::chr17:6983479..6983490,- p4@CLEC10A
Hg19::chr17:6983503..6983512,- p5@CLEC10A
Hg19::chr17:6983550..6983578,- p1@CLEC10A
Hg19::chr17:8171916..8171922,+ p4@PFAS
Hg19::chr17:995355..995405,- p31@ABR
Hg19::chr17:995426..995430,- p54@ABR
Hg19::chr18:43620121..43620126,- p10@PSTPIP2
Hg19::chr18:43622921..43622930,- p@chr18:43622921..43622930
-
Hg19::chr18:59991691..59991708,+ p@chr18:59991691..59991708
+
Hg19::chr18:60190653..60190680,+ p4@ZCCHC2
Hg19::chr18:60190682..60190702,+ p5@ZCCHC2
Hg19::chr18:67624099..67624112,- p8@CD226
Hg19::chr18:9866805..9866820,- p@chr18:9866805..9866820
-
Hg19::chr18:9914760..9914776,+ p@chr18:9914760..9914776
+
Hg19::chr18:9914783..9914812,+ p@chr18:9914783..9914812
+
Hg19::chr19:10246009..10246023,+ p@chr19:10246009..10246023
+
Hg19::chr19:10246051..10246052,+ p@chr19:10246051..10246052
+
Hg19::chr19:11018749..11018760,+ p@chr19:11018749..11018760
+
Hg19::chr19:11018763..11018773,+ p@chr19:11018763..11018773
+
Hg19::chr19:17842944..17842967,+ p@chr19:17842944..17842967
+
Hg19::chr19:17842968..17843001,+ p@chr19:17842968..17843001
+
Hg19::chr19:17843005..17843009,+ p@chr19:17843005..17843009
+
Hg19::chr19:38778450..38778469,+ +
p@chr19:38778450..38778469
Hg19::chr19:4723083..4723095,+ p@chr19:4723083..4723095
+
Hg19::chr19:7606231..7606243,+ p@chr19:7606231..7606243
+
Hg19::chr19:7606381..7606391,+ p@chr19:7606381..7606391
+
Hg19::chr19:7764283..7764297,- p4@FCER2
Hg19::chr19:7795730..7795740,- p5@CLEC4G
Hg19::chr19:7806267..7806270,- p@chr19:7806267..7806270
-
Hg19::chr1:112162997..112163027,- p@chr1:112162997..112163027
-
Hg19::chr1:153744081..153744096,+ p@chr1:153744081..153744096
+
Hg19::chr1:153744224..153744233,+ p@chr1:153744224..153744233
+
Hg19::chr1:153744246..153744280,+ p@chr1:153744246..153744280
+
Hg19::chr1:153744286..153744294,+ p@chr1:153744286..153744294
+
Hg19::chr1:153744295..153744304,+ p@chr1:153744295..153744304
+
Hg19::chr1:153746683..153746732,+ p13@SLC27A3
Hg19::chr1:153747834..153747911,+ p1@SLC27A3
Hg19::chr1:153747915..153747927,+ p5@SLC27A3
Hg19::chr1:153747936..153747951,+ p4@SLC27A3
Hg19::chr1:153750622..153750640,+ p6@SLC27A3
Hg19::chr1:158224298..158224321,+ p6@CD1A
Hg19::chr1:158224323..158224353,+ p2@CD1A
Hg19::chr1:158224355..158224378,+ p3@CD1A
Hg19::chr1:158259591..158259602,+ p6@CD1C
Hg19::chr1:158259622..158259633,+ p7@CD1C
Hg19::chr1:158259705..158259821,+ p1@CD1C
Hg19::chr1:158260421..158260439,+ p8@CD1C
Hg19::chr1:158260509..158260514,+ p10@CD1C
Hg19::chr1:158260520..158260523,+ p18@CD1C
Hg19::chr1:158301249..158301260,- p8@CD1B
Hg19::chr1:158301312..158301328,- p1@CD1B
Hg19::chr1:159272420..159272431,+ p3@FCER1A
Hg19::chr1:159272441..159272452,+ p5@FCER1A
Hg19::chr1:21416212..21416241,- p@chr1:21416212..21416241
-
Hg19::chr1:224398082..224398104,- p2@ENST00000453760
Hg19::chr1:224398121..224398143,- p1@ENST00000453760
Hg19::chr1:26870235..26870246,+ p@chr1:26870235..26870246
+
Hg19::chr1:35496407..35496423,- p7@ZMYM6
Hg19::chr1:39468925..39468933,+ p@chr1:39468925..39468933
+
Hg19::chr1:63112277..63112278,+ p@chr1:63112277..63112278
+
Hg19::chr1:6418966..6419024,- p8@ACOT7
Hg19::chr1:75198605..75198621,- p6@CRYZ
Hg19::chr20:15229663..15229673,+ +
p@chr20:15229663..15229673
Hg19::chr20:57571735..57571753,+ p@chr20:57571735..57571753
+
Hg19::chr20:635110..635159,- p@chr20:635110..635159
-
Hg19::chr20:9966728..9966750,+ p1@ENST00000449270
Hg19::chr20:9966757..9966774,+ p1@ENST00000437504
Hg19::chr21:45110170..45110191,+ p@chr21:45110170..45110191
+
Hg19::chr21:45111299..45111337,+ +
p@chr21:45111299..45111337
Hg19::chr21:46351249..46351257,+ p@chr21:46351249..46351257
+
Hg19::chr22:22153778..22153825,- p@chr22:22153778..22153825
-
Hg19::chr22:38609570..38609585,+ p6@MAFF
Hg19::chr22:38609587..38609607,+ p7@MAFF
Hg19::chr22:38609611..38609624,+ p5@MAFF
Hg19::chr2:105372203..105372222,- p1@ENST00000424321
p1@uc002tci.1
Hg19::chr2:111877826..111877841,+ p@chr2:111877826..111877841
+
Hg19::chr2:111877864..111877875,+ p@chr2:111877864..111877875
+
Hg19::chr2:134024736..134024752,- p@chr2:134024736..134024752
-
Hg19::chr2:216878240..216878288,- p1@MREG
Hg19::chr2:218930415..218930444,- p1@CXCR2P1
Hg19::chr2:218933972..218933980,+ p1@RUFY4
Hg19::chr2:218954217..218954224,+ p@chr2:218954217..218954224
+
Hg19::chr2:239008780..239008802,+ p6@ESPNL
Hg19::chr2:239008973..239009011,+ p1@ESPNL
Hg19::chr2:239009020..239009045,+ p3@ESPNL
Hg19::chr2:27545434..27545444,- p8@MPV17
Hg19::chr2:96987571..96987587,- p3@ENST00000421534
Hg19::chr2:96987608..96987641,- p1@ENST00000421534
Hg19::chr2:97012075..97012086,+ p@chr2:97012075..97012086
+
Hg19::chr3:120500144..120500155,+ p@chr3:120500144..120500155
+
Hg19::chr3:120500162..120500171,+ p@chr3:120500162..120500171
+
Hg19::chr3:152588213..152588224,+ p@chr3:152588213..152588224
+
Hg19::chr3:152588255..152588266,+ p@chr3:152588255..152588266
+
Hg19::chr3:187492137..187492153,- p@chr3:187492137..187492153
-
Hg19::chr3:188001278..188001286,+ p@chr3:188001278..188001286
+
Hg19::chr3:188001317..188001332,+ p@chr3:188001317..188001332
+
Hg19::chr3:188302186..188302202,+ p21@LPP
Hg19::chr3:189025969..189025974,+ p@chr3:189025969..189025974
+
Hg19::chr3:195925842..195925889,- p2@ZDHHC19
Hg19::chr3:50648789..50648806,- p4@CISH
Hg19::chr3:50648941..50648958,+ p7@MAPKAPK3
Hg19::chr3:52280220..52280225,+ p12@PPM1M
Hg19::chr3:52280243..52280249,+ p10@PPM1M
Hg19::chr3:58477616..58477641,+ p2@KCTD6
Hg19::chr4:129491457..129491467,- p2@uc003igi.1
Hg19::chr4:129491478..129491496,- p1@uc003igi.1
Hg19::chr4:169632568..169632586,+ p@chr4:169632568..169632586
+
Hg19::chr4:169633317..169633344,+ p43@PALLD
Hg19::chr4:26324474..26324501,+ p16@RBPJ
Hg19::chr4:26324517..26324526,+ p48@RBPJ
Hg19::chr4:26887004..26887011,- p@chr4:26887004..26887011
-
Hg19::chr4:47916061..47916098,- p8@NFXL1
Hg19::chr4:47916504..47916515,- p6@NFXL1
Hg19::chr4:47916543..47916580,- p2@NFXL1
Hg19::chr4:78105380..78105389,+ p@chr4:78105380..78105389
+
Hg19::chr4:78105456..78105472,+ p@chr4:78105456..78105472
+
Hg19::chr4:78269658..78269665,+ p@chr4:78269658..78269665
+
Hg19::chr4:78301661..78301667,+ p@chr4:78301661..78301667
+
Hg19::chr4:91005462..91005483,+ p@chr4:91005462..91005483
+
Hg19::chr5:132200275..132200284,- p2@GDF9
Hg19::chr5:137330866..137330879,- p@chr5:137330866..137330879
-
Hg19::chr5:137333629..137333641,- p@chr5:137333629..137333641
-
Hg19::chr5:14492668..14492692,+ p19@TRIO
Hg19::chr5:176782864..176782872,- p@chr5:176782864..176782872
-
Hg19::chr5:41800428..41800437,- p@chr5:41800428..41800437
-
Hg19::chr5:52909608..52909635,+ p@chr5:52909608..52909635
+
Hg19::chr5:71803177..71803255,- p1@ZNF366
Hg19::chr5:86707848..86707855,- p@chr5:86707848..86707855
-
Hg19::chr5:86707911..86707917,- p@chr5:86707911..86707917
-
Hg19::chr5:86708217..86708246,+ p@chr5:86708217..86708246
+
Hg19::chr6:114291266..114291293,+ p1@ENST00000436876
Hg19::chr6:114291386..114291399,+ p1@ENST00000449620
Hg19::chr6:116691001..116691027,+ p9@DSE
Hg19::chr6:116691028..116691039,+ p21@DSE
Hg19::chr6:129927249..129927264,- p@chr6:129927249..129927264
-
Hg19::chr6:137105269..137105289,+ p@chr6:137105269..137105289
+
Hg19::chr6:137482892..137482907,- p1@IL22RA2
Hg19::chr6:154521022..154521041,- p@chr6:154521022..154521041
-
Hg19::chr6:154521063..154521071,- p@chr6:154521063..154521071
-
Hg19::chr6:16762587..16762608,- p@chr6:16762587..16762608
-
Hg19::chr6:18445716..18445720,+ p@chr6:18445716..18445720
+
Hg19::chr6:32156759..32156767,+ p@chr6:32156759..32156767
+
Hg19::chr6:32498031..32498042,- p4@HLA-DRB5
Hg19::chr6:32557517..32557540,- p3@HLA-DRB1
p3@HLA-DRB5
Hg19::chr6:32557549..32557560,- p6@HLA-DRB1
p7@HLA-DRB5
Hg19::chr6:41130847..41130867,- p1@TREM2
Hg19::chr6:41130884..41130890,- p4@TREM2
Hg19::chr6:41130893..41130905,- p3@TREM2
Hg19::chr6:41130921..41130949,- p2@TREM2
Hg19::chr6:42145678..42145695,+ p@chr6:42145678..42145695
+
Hg19::chr6:42145703..42145716,+ p@chr6:42145703..42145716
+
Hg19::chr6:6704542..6704546,- p@chr6:6704542..6704546
-
Hg19::chr6:6801352..6801378,- p@chr6:6801352..6801378
-
Hg19::chr6:6851625..6851634,+ p@chr6:6851625..6851634
+
Hg19::chr6:76311956..76311965,+ p13@SENP6
Hg19::chr6:76311970..76311977,+ p14@SENP6
Hg19::chr6:76311981..76311988,+ p15@SENP6
Hg19::chr7:115790735..115790752,- p@chr7:115790735..115790752
-
Hg19::chr7:28614860..28614868,- p@chr7:28614860..28614868
-
Hg19::chr7:28614885..28614902,- p@chr7:28614885..28614902
-
Hg19::chr7:73657872..73657896,- p2@RFC2
Hg19::chr8:101348539..101348566,- p17@RNF19A
Hg19::chr8:17777952..17777982,- -
p@chr8:17777952..17777982
Hg19::chr8:20258288..20258300,+ p@chr8:20258288..20258300
+
Hg19::chr8:20258347..20258360,+ p@chr8:20258347..20258360
+
Hg19::chr8:67101044..67101050,+ p@chr8:67101044..67101050
+
Hg19::chr8:97868092..97868102,+ p@chr8:97868092..97868102
+
Hg19::chr8:97906247..97906259,+ p@chr8:97906247..97906259
+
Hg19::chr9:124262213..124262234,- p3@GGTA1P
Hg19::chr9:124262252..124262263,- p8@GGTA1P
Hg19::chr9:124262289..124262296,- p9@GGTA1P
Hg19::chr9:131235669..131235680,+ +
p@chr9:131235669..131235680
Hg19::chr9:131235697..131235702,+ p@chr9:131235697..131235702
+
Hg19::chr9:135665202..135665215,- -
p@chr9:135665202..135665215
Hg19::chr9:35650229..35650243,- p1@AK093793
p1@AX748309
Hg19::chrX:43603033..43603042,+ p11@MAOA
Hg19::chrX:43603059..43603080,+ p4@MAOA
Hg19::chrX:43603088..43603100,+ p8@MAOA
Hg19::chrX:43684298..43684322,+ p@chrX:43684298..43684322
+
Hg19::chrX:80462246..80462271,+ p@chrX:80462246..80462271
+


Enriched pathways on this co-expression clusterSummary:
Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.
Analyst: Emmanuel Dimont

link to source dataset
data

p.valueFDRnGenesnPathwayName
2.56514820294416e-060.00162373881246366588Hematopoietic cell lineage (KEGG):04640
0.0001963575646258050.04143144613604495217IL-4 up reg. targets (Netpath):NetPath_16
7.59372259526931e-060.00240341320140274451{HLA-A,53} (Static Module):NA



Enriched Gene Ontology terms on this co-expression clusterSummary: Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter.
Analyst: Erik Arner

link to source dataset
data

GO IDGO nameFDR corrected p-value
GO:0019863IgE binding5.1960847290596e-05
GO:0005886plasma membrane0.000122264959160882
GO:0019865immunoglobulin binding0.000955205006431885
GO:0016020membrane0.00119483706388099
GO:0005529sugar binding0.00824731730437619
GO:0044425membrane part0.00824731730437619
GO:0006955immune response0.00824731730437619
GO:0030318melanocyte differentiation0.00824731730437619
GO:0050931pigment cell differentiation0.00824731730437619
GO:0016021integral to membrane0.00824731730437619
GO:0031224intrinsic to membrane0.00834284437193673
GO:0005887integral to plasma membrane0.0145372615868946
GO:0031226intrinsic to plasma membrane0.0147652395785898
GO:0002376immune system process0.0166019979534477
GO:0030246carbohydrate binding0.0166019979534477
GO:0044459plasma membrane part0.0183348900050476
GO:0048066pigmentation during development0.0191821965536301
GO:0044464cell part0.0276503768469693
GO:0019370leukotriene biosynthetic process0.0311516029945749
GO:0043450alkene biosynthetic process0.0311516029945749
GO:0032403protein complex binding0.0360937359626909
GO:0050730regulation of peptidyl-tyrosine phosphorylation0.0438007771105616
GO:0006691leukotriene metabolic process0.0438007771105616
GO:0043449alkene metabolic process0.0438007771105616
GO:0046456icosanoid biosynthetic process0.0438007771105616
GO:0008420CTD phosphatase activity0.0438007771105616
GO:0047757chondroitin-glucuronate 5-epimerase activity0.0438007771105616
GO:0042018interleukin-22 receptor activity0.0438007771105616
GO:0042017interleukin-22 binding0.0438007771105616
GO:0004642phosphoribosylformylglycinamidine synthase activity0.0438007771105616
GO:0004234macrophage elastase activity0.0438007771105616
GO:0008924malate dehydrogenase (acceptor) activity0.0438007771105616
GO:0047800cysteamine dioxygenase activity0.0438007771105616



Enriched sample ontology terms on this co-expression clusterSummary:To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. Analyst: Hideya Kawaji

links to source dataset

cell_data
uberon_data

Uber Anatomy
Ontology termp-valuen
bone marrow1.47e-0976
bone element6.90e-0982
musculoskeletal system1.92e-08167
umbilical artery2.26e-084
skeletal element3.96e-0890
immune system7.07e-0893
hematopoietic system1.72e-0798
blood island1.72e-0798
skeletal system2.40e-07100
hemolymphoid system8.01e-07108


Overrepresented TFBS (DNA) motifs on this co-expression clusterSummary:The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. Analyst: Michiel de Hoon

link to source data
Novel motifs
data

Jaspar motifs
data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10
MA0004.10.0157618
MA0006.10.151509
MA0007.10.00967796
MA0009.10.218055
MA0014.12.41082e-16
MA0017.10.712692
MA0019.10.0807652
MA0024.10.0412385
MA0025.10.13574
MA0027.10.944603
MA0028.16.73664e-05
MA0029.10.906894
MA0030.10.0978123
MA0031.10.0202565
MA0038.10.896473
MA0040.10.115042
MA0041.10.292338
MA0042.10.929411
MA0043.10.218543
MA0046.10.341104
MA0048.10.00471812
MA0050.10.53062
MA0051.10.232123
MA0052.10.716904
MA0055.10.0103618
MA0056.10
MA0057.10.000316045
MA0058.10.14596
MA0059.10.248881
MA0060.11.30622e-06
MA0061.10.00374819
MA0063.10
MA0066.10.245607
MA0067.10.354304
MA0068.10.677748
MA0069.13.73008
MA0070.10.180148
MA0071.11.32818
MA0072.12.64799
MA0073.15.85801e-06
MA0074.10.0636031
MA0076.17.12716e-05
MA0077.10.642706
MA0078.10.152897
MA0081.11.27558
MA0083.10.0154841
MA0084.10.331857
MA0087.10.661964
MA0088.10.0164825
MA0089.10
MA0090.10.412396
MA0091.11.08446
MA0092.10.175703
MA0093.10.00398186
MA0095.10
MA0098.10
MA0100.10.657384
MA0101.10.0986946
MA0103.10.064646
MA0105.15.87877e-06
MA0106.11.01637
MA0107.10.0263388
MA0108.20.267121
MA0109.10
MA0111.10.399277
MA0113.10.329606
MA0114.10.632288
MA0115.10.759537
MA0116.10.0431295
MA0117.10.066648
MA0119.10.0708219
MA0122.10.769667
MA0124.10.644035
MA0125.10.251084
MA0130.10
MA0131.10.0141969
MA0132.10
MA0133.10
MA0135.10.267759
MA0136.12.09926
MA0139.10.00392478
MA0140.10.0573481
MA0141.11.09224
MA0142.10.449971
MA0143.10.232036
MA0144.11.7428
MA0145.10.0453755
MA0146.14.14463e-07
MA0147.10.00370225
MA0148.10.0482425
MA0149.10.121301
MA0062.24.33784e-05
MA0035.20.139081
MA0039.21.46091e-12
MA0138.20.000942222
MA0002.20.00641655
MA0137.21.49974
MA0104.20.00016999
MA0047.20.0171591
MA0112.20.0205191
MA0065.20.163719
MA0150.10.470166
MA0151.10
MA0152.10.304744
MA0153.10.400116
MA0154.10.0134319
MA0155.10.212606
MA0156.11.06503
MA0157.10.0218286
MA0158.10
MA0159.10.0161421
MA0160.11.09387
MA0161.10
MA0162.16.65228e-06
MA0163.14.87744e-10
MA0164.11.02602
MA0080.26.21845
MA0018.20.127601
MA0099.20.306061
MA0079.20
MA0102.20.117463
MA0258.10.0237283
MA0259.10.0221593
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysisSummary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained.
Analyst: Erik Arner

link to source dataset

data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
SPI1#6688741.85097542570331.14115300581627e-076.62484039880183e-06



Relative expression of the co-expression clusterSummary:Co-expression clusters are compared against FANTOM5 samples to obtain relative expression.
Analyst:NA

link to data source
data

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=Coexpression_cluster:C54&oldid=3067172"