FFCP PHASE1:Hg19::chr21:30144444..30144467,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C48|description=CAGE_peak_at_chr21:30144444..30144467,-|id=chr21:30144444..30144467,-|ontology_enrichment_celltype=CL:0002504!3.03e-09!3;CL:1000279!3.03e-09!3;CL:1000280!3.03e-09!3;CL:0002622!3.21e-09!3;CL:1000487!4.70e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009143;1.44e-15;1!UBERON:0003124;1.44e-15;1!UBERON:0004874;1.44e-15;1!UBERON:0006603;4.32e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.55e-08;2|ontology_enrichment_disease_v019_2=DOID:3307,1.61e-08,2|ontology_enrichment_uberon=UBERON:0000162!9.41e-16!14;UBERON:0001353!9.41e-16!14;UBERON:0000163!9.41e-16!14;UBERON:0006866!9.41e-16!14;UBERON:0000164!9.41e-16!14;UBERON:0000931!9.41e-16!14;UBERON:0004122!1.41e-14!15;UBERON:0003937!1.85e-14!12;UBERON:0005399!1.85e-14!12;UBERON:0003101!6.67e-14!22;UBERON:0000079!6.67e-14!22;UBERON:0001046!7.52e-14!19;UBERON:0004921!3.60e-12!129;UBERON:0004185!3.60e-12!129;UBERON:0002367!4.12e-12!11;UBERON:0010147!4.12e-12!11;UBERON:0009846!4.12e-12!11;UBERON:0003353!4.12e-12!11;UBERON:0004902!4.12e-12!11;UBERON:0003820!4.12e-12!11;UBERON:0009847!4.12e-12!11;UBERON:0001007!9.91e-10!155;UBERON:0001555!9.91e-10!155;UBERON:0007026!9.91e-10!155;UBERON:0004119!3.73e-09!169;UBERON:0000925!3.73e-09!169;UBERON:0006595!3.73e-09!169;UBERON:0003064!4.92e-09!37;UBERON:0005156!6.51e-09!59;UBERON:0000990!6.51e-09!59;UBERON:0002530!1.67e-08!59;UBERON:0003929!2.29e-08!54;UBERON:0000160!6.88e-07!27;UBERON:0001008!8.87e-07!45;UBERON:0002100!9.34e-07!216;UBERON:0000077!9.36e-07!130|ontology_enrichment_uberon_v019=UBERON:0000996;9.28e-16;1!UBERON:0001000;1.44e-15;1!UBERON:0000989;1.44e-15;1!UBERON:0008811;1.44e-15;1!UBERON:0005352;1.44e-15;1!UBERON:0000077;2.89e-13;27!UBERON:0003101;1.23e-10;22!UBERON:0000079;1.23e-10;22!UBERON:0001255;1.29e-08;2!UBERON:0001556;1.29e-08;2!UBERON:0005156;1.31e-07;59!UBERON:0000990;1.31e-07;59|ontology_enrichment_uberon_v019_2=UBERON:0000162,1.15e-16,14;UBERON:0001353,1.15e-16,14;UBERON:0000163,1.15e-16,14;UBERON:0006866,1.15e-16,14;UBERON:0000164,1.15e-16,14;UBERON:0000931,1.15e-16,14;UBERON:0000996,8.63e-16,1;UBERON:0000989,1.16e-15,1;UBERON:0008811,1.16e-15,1;UBERON:0006258,1.16e-15,1;UBERON:0005876,1.16e-15,1;UBERON:0004874,1.16e-15,1;UBERON:0001000,1.34e-15,1;UBERON:0005352,1.34e-15,1;UBERON:0004122,1.41e-15,15;UBERON:0003064,8.60e-13,28;UBERON:0001046,2.31e-12,19;UBERON:0000077,2.55e-12,29;UBERON:0005156,2.76e-11,59;UBERON:0000990,2.76e-11,59;UBERON:0003101,1.23e-10,22;UBERON:0000079,1.23e-10,22;UBERON:0004175,2.31e-09,25;UBERON:0007023,2.82e-09,114;UBERON:0001255,1.29e-08,2;UBERON:0001556,1.29e-08,2;UBERON:0001008,2.00e-07,48;UBERON:0003133,2.20e-07,48|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.635795703478686,0,0.309157587715317,0.257640540045629,0,0,0,0.504867548488229,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.08875926222856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23074737923365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr21:30144444..30144467,- | |||
|id=chr21:30144444..30144467,- | |||
|ontology_enrichment_celltype=CL:0002504!3.03e-09!3;CL:1000279!3.03e-09!3;CL:1000280!3.03e-09!3;CL:0002622!3.21e-09!3;CL:1000487!4.70e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.44e-15;1!UBERON:0003124;1.44e-15;1!UBERON:0004874;1.44e-15;1!UBERON:0006603;4.32e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.55e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000162!9.41e-16!14;UBERON:0001353!9.41e-16!14;UBERON:0000163!9.41e-16!14;UBERON:0006866!9.41e-16!14;UBERON:0000164!9.41e-16!14;UBERON:0000931!9.41e-16!14;UBERON:0004122!1.41e-14!15;UBERON:0003937!1.85e-14!12;UBERON:0005399!1.85e-14!12;UBERON:0003101!6.67e-14!22;UBERON:0000079!6.67e-14!22;UBERON:0001046!7.52e-14!19;UBERON:0004921!3.60e-12!129;UBERON:0004185!3.60e-12!129;UBERON:0002367!4.12e-12!11;UBERON:0010147!4.12e-12!11;UBERON:0009846!4.12e-12!11;UBERON:0003353!4.12e-12!11;UBERON:0004902!4.12e-12!11;UBERON:0003820!4.12e-12!11;UBERON:0009847!4.12e-12!11;UBERON:0001007!9.91e-10!155;UBERON:0001555!9.91e-10!155;UBERON:0007026!9.91e-10!155;UBERON:0004119!3.73e-09!169;UBERON:0000925!3.73e-09!169;UBERON:0006595!3.73e-09!169;UBERON:0003064!4.92e-09!37;UBERON:0005156!6.51e-09!59;UBERON:0000990!6.51e-09!59;UBERON:0002530!1.67e-08!59;UBERON:0003929!2.29e-08!54;UBERON:0000160!6.88e-07!27;UBERON:0001008!8.87e-07!45;UBERON:0002100!9.34e-07!216;UBERON:0000077!9.36e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;9.28e-16;1!UBERON:0001000;1.44e-15;1!UBERON:0000989;1.44e-15;1!UBERON:0008811;1.44e-15;1!UBERON:0005352;1.44e-15;1!UBERON:0000077;2.89e-13;27!UBERON:0003101;1.23e-10;22!UBERON:0000079;1.23e-10;22!UBERON:0001255;1.29e-08;2!UBERON:0001556;1.29e-08;2!UBERON:0005156;1.31e-07;59!UBERON:0000990;1.31e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,1.15e-16,14;UBERON:0001353,1.15e-16,14;UBERON:0000163,1.15e-16,14;UBERON:0006866,1.15e-16,14;UBERON:0000164,1.15e-16,14;UBERON:0000931,1.15e-16,14;UBERON:0000996,8.63e-16,1;UBERON:0000989,1.16e-15,1;UBERON:0008811,1.16e-15,1;UBERON:0006258,1.16e-15,1;UBERON:0005876,1.16e-15,1;UBERON:0004874,1.16e-15,1;UBERON:0001000,1.34e-15,1;UBERON:0005352,1.34e-15,1;UBERON:0004122,1.41e-15,15;UBERON:0003064,8.60e-13,28;UBERON:0001046,2.31e-12,19;UBERON:0000077,2.55e-12,29;UBERON:0005156,2.76e-11,59;UBERON:0000990,2.76e-11,59;UBERON:0003101,1.23e-10,22;UBERON:0000079,1.23e-10,22;UBERON:0004175,2.31e-09,25;UBERON:0007023,2.82e-09,114;UBERON:0001255,1.29e-08,2;UBERON:0001556,1.29e-08,2;UBERON:0001008,2.00e-07,48;UBERON:0003133,2.20e-07,48 | |||
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|short_description=p@chr21:30144444..30144467,- | |||
}} |
Revision as of 10:00, 12 September 2013
Short description: | p@chr21:30144444..30144467, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:30144444..30144467, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cloaca | 1.15e-16 | 14 |
anal region | 1.15e-16 | 14 |
embryonic cloaca | 1.15e-16 | 14 |
terminal part of digestive tract | 1.15e-16 | 14 |
primitive urogenital sinus | 1.15e-16 | 14 |
proctodeum | 1.15e-16 | 14 |
vagina | 8.63e-16 | 1 |
penis | 1.16e-15 | 1 |
intromittent organ | 1.16e-15 | 1 |
lateral plate mesenchyme | 1.16e-15 | 1 |
undifferentiated genital tubercle | 1.16e-15 | 1 |
somatopleure | 1.16e-15 | 1 |
vas deferens | 1.34e-15 | 1 |
spermatic cord | 1.34e-15 | 1 |
genitourinary system | 1.41e-15 | 15 |
intermediate mesoderm | 8.60e-13 | 28 |
hindgut | 2.31e-12 | 19 |
mixed endoderm/mesoderm-derived structure | 2.55e-12 | 29 |
reproductive structure | 2.76e-11 | 59 |
reproductive system | 2.76e-11 | 59 |
male organism | 1.23e-10 | 22 |
male reproductive system | 1.23e-10 | 22 |
internal genitalia | 2.31e-09 | 25 |
adult organism | 2.82e-09 | 114 |
urinary bladder | 1.29e-08 | 2 |
lower urinary tract | 1.29e-08 | 2 |
renal system | 2.00e-07 | 48 |
reproductive organ | 2.20e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.61e-08 | 2 |
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