FFCP PHASE1:Hg19::chr21:45682336..45682380,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29947|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2980|TSSclassifier=N|UniProt=Q9UJW3|association_with_transcript=-237bp_to_ENST00000270172,ENST00000418993,NM_013369,NM_175867,uc002zeg.1,uc002zeh.1_5end|coexpression_cluster_id=C89|description=CAGE_peak_5_at_DNMT3L_5end|id=chr21:45682336..45682380,-|ontology_enrichment_celltype=CL:0000039!9.66e-51!7;CL:0000586!9.66e-51!7;CL:0002322!3.54e-12!5|ontology_enrichment_celltype_v019=CL:0000039;1.61e-23;7!CL:0000586;1.61e-23;7!CL:0000047;6.96e-21;2!CL:0002319;7.24e-07;25|ontology_enrichment_celltype_v019_2=CL:0000039,1.61e-23,7;CL:0000586,1.61e-23,7;CL:0002319,7.24e-07,25|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3|ontology_enrichment_disease=DOID:3095!3.03e-16!22;DOID:2994!3.03e-16!22;DOID:1799!1.16e-15!1;DOID:10165!1.16e-15!1;DOID:1798!1.16e-15!1|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:3095;3.27e-08;22!DOID:2994;3.27e-08;22!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7|ontology_enrichment_uberon=UBERON:0000473!1.02e-16!8;UBERON:0003135!2.49e-12!11;UBERON:0004458!2.96e-07!49|ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,2.3056390438806,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3724627989127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.58589565543461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0.534434810531121,2.48116228744081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@DNMT3L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2980 | |||
|TSSclassifier=N | |||
|UniProt=Q9UJW3 | |||
|association_with_transcript=-237bp_to_ENST00000270172,ENST00000418993,NM_013369,NM_175867,uc002zeg.1,uc002zeh.1_5end | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_5_at_DNMT3L_5end | |||
|id=chr21:45682336..45682380,- | |||
|ontology_enrichment_celltype=CL:0000039!9.66e-51!7;CL:0000586!9.66e-51!7;CL:0002322!3.54e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.61e-23;7!CL:0000586;1.61e-23;7!CL:0000047;6.96e-21;2!CL:0002319;7.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.61e-23,7;CL:0000586,1.61e-23,7;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease=DOID:3095!3.03e-16!22;DOID:2994!3.03e-16!22;DOID:1799!1.16e-15!1;DOID:10165!1.16e-15!1;DOID:1798!1.16e-15!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:3095;3.27e-08;22!DOID:2994;3.27e-08;22!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.02e-16!8;UBERON:0003135!2.49e-12!11;UBERON:0004458!2.96e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,2.3056390438806,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3724627989127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.58589565543461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0.534434810531121,2.48116228744081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@DNMT3L | |||
}} |
Revision as of 10:40, 12 September 2013
Short description: | p5@DNMT3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DNMT3L_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | -237bp_to_ENST00000270172, ENST00000418993, NM_013369, NM_175867, uc002zeg.1, uc002zeh.1_5end |
EntrezGene: | DNMT3L |
HGNC: | 2980 |
UniProt: | Q9UJW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.61e-23 | 7 |
germ cell | 1.61e-23 | 7 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
germ cell and embryonal cancer | 3.27e-08 | 22 |
germ cell cancer | 3.27e-08 | 22 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.