FFCP PHASE1:Hg19::chr22:44427230..44427253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29780|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14653|TSSclassifier=S|UniProt=B0QYP8|association_with_transcript=0bp_to_ENST00000444029_5end|coexpression_cluster_id=C12|description=CAGE_peak_8_at_PARVB_5end|id=chr22:44427230..44427253,+|ontology_enrichment_celltype=CL:0002139!2.90e-21!24;CL:0000115!5.13e-17!35;CL:0000071!5.17e-15!18;CL:0002546!5.17e-15!18;CL:0002078!1.94e-12!44;CL:0002274!1.95e-12!5;CL:0000457!1.95e-12!5;CL:0002191!1.95e-12!5;CL:0000097!1.95e-12!5;CL:0000831!1.95e-12!5;CL:0002028!1.95e-12!5;CL:0000213!1.86e-08!57;CL:0000215!1.86e-08!57;CL:1000413!2.10e-08!9;CL:0005020!6.20e-08!6;CL:0002138!6.20e-08!6;CL:0005022!6.20e-08!6;CL:0002144!2.88e-07!3;CL:0002618!3.78e-07!3;CL:0000898!9.50e-07!3|ontology_enrichment_celltype_v019=CL:0000097;2.62e-63;5!CL:0000163;2.93e-35;9!CL:0000151;3.43e-08;36|ontology_enrichment_celltype_v019_2=CL:0000097,2.80e-63,5;CL:0002028,2.80e-63,5;CL:0000163,3.04e-35,9;CL:0000151,8.43e-09,36;CL:0000763,2.42e-08,108;CL:0000049,2.42e-08,108|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!5.17e-15!18;UBERON:0004638!5.17e-15!18;UBERON:0004852!5.17e-15!18;UBERON:0000487!1.03e-11!22;UBERON:0006914!6.11e-10!25;UBERON:0003915!2.10e-08!9;UBERON:0004700!2.10e-08!9;UBERON:0001917!2.10e-08!9;UBERON:0000055!9.94e-08!69;UBERON:0002193!1.23e-07!112;UBERON:0003081!1.37e-07!216;UBERON:0001009!1.62e-07!113;UBERON:0001915!2.88e-07!3;UBERON:0001982!2.88e-07!3|ontology_enrichment_uberon_v019=UBERON:0002171;1.33e-13;1!UBERON:0006518;1.33e-13;1!UBERON:0008949;1.33e-13;1!UBERON:0000101;1.33e-13;1!UBERON:0002167;1.33e-13;1|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.61e-13,1;UBERON:0006518,1.61e-13,1;UBERON:0008949,1.61e-13,1;UBERON:0000101,1.61e-13,1;UBERON:0002167,1.61e-13,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0,0,0,0,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0,0.56530794192401,0.838998872419812,0.550236083880135,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,0,0,0.535798369704479,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,4.43396914106349,9.42118243941519,14.9276243189356,20.0326735249576,36.231578393371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8682022125677,0.66614393599564,2.81974010175699,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.997270091400938,0,0,0,0,2.2251121057253,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.657887425858975,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@PARVB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |||
|TSSclassifier=S | |||
|UniProt=B0QYP8 | |||
|association_with_transcript=0bp_to_ENST00000444029_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_8_at_PARVB_5end | |||
|id=chr22:44427230..44427253,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.90e-21!24;CL:0000115!5.13e-17!35;CL:0000071!5.17e-15!18;CL:0002546!5.17e-15!18;CL:0002078!1.94e-12!44;CL:0002274!1.95e-12!5;CL:0000457!1.95e-12!5;CL:0002191!1.95e-12!5;CL:0000097!1.95e-12!5;CL:0000831!1.95e-12!5;CL:0002028!1.95e-12!5;CL:0000213!1.86e-08!57;CL:0000215!1.86e-08!57;CL:1000413!2.10e-08!9;CL:0005020!6.20e-08!6;CL:0002138!6.20e-08!6;CL:0005022!6.20e-08!6;CL:0002144!2.88e-07!3;CL:0002618!3.78e-07!3;CL:0000898!9.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.62e-63;5!CL:0000163;2.93e-35;9!CL:0000151;3.43e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.80e-63,5;CL:0002028,2.80e-63,5;CL:0000163,3.04e-35,9;CL:0000151,8.43e-09,36;CL:0000763,2.42e-08,108;CL:0000049,2.42e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.17e-15!18;UBERON:0004638!5.17e-15!18;UBERON:0004852!5.17e-15!18;UBERON:0000487!1.03e-11!22;UBERON:0006914!6.11e-10!25;UBERON:0003915!2.10e-08!9;UBERON:0004700!2.10e-08!9;UBERON:0001917!2.10e-08!9;UBERON:0000055!9.94e-08!69;UBERON:0002193!1.23e-07!112;UBERON:0003081!1.37e-07!216;UBERON:0001009!1.62e-07!113;UBERON:0001915!2.88e-07!3;UBERON:0001982!2.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.33e-13;1!UBERON:0006518;1.33e-13;1!UBERON:0008949;1.33e-13;1!UBERON:0000101;1.33e-13;1!UBERON:0002167;1.33e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.61e-13,1;UBERON:0006518,1.61e-13,1;UBERON:0008949,1.61e-13,1;UBERON:0000101,1.61e-13,1;UBERON:0002167,1.61e-13,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0,0,0,0,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0,0.56530794192401,0.838998872419812,0.550236083880135,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,0,0,0.535798369704479,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,4.43396914106349,9.42118243941519,14.9276243189356,20.0326735249576,36.231578393371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8682022125677,0.66614393599564,2.81974010175699,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.997270091400938,0,0,0,0,2.2251121057253,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.657887425858975,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PARVB | |||
}} |
Revision as of 12:18, 12 September 2013
Short description: | p8@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PARVB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000444029_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | B0QYP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.80e-63 | 5 |
basophil mast progenitor cell | 2.80e-63 | 5 |
endocrine cell | 3.04e-35 | 9 |
secretory cell | 8.43e-09 | 36 |
myeloid cell | 2.42e-08 | 108 |
common myeloid progenitor | 2.42e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.61e-13 | 1 |
right lung lobe | 1.61e-13 | 1 |
lower lobe of lung | 1.61e-13 | 1 |
lobe of lung | 1.61e-13 | 1 |
right lung | 1.61e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.