FFCP PHASE1:Hg19::chr2:128928131..128928144,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56886|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=15663|TSSclassifier=S|UniProt=|association_with_transcript=90bp_to_AK074376_5end|coexpression_cluster_id=C55|description=CAGE_peak_7_at_UGGT1_5end|id=chr2:128928131..128928144,+|ontology_enrichment_celltype=CL:0002127!9.79e-26!1;CL:0000914!9.79e-26!1;CL:0000911!9.79e-26!1;CL:0000814!9.79e-26!1;CL:0002042!9.79e-26!1;CL:0002039!9.79e-26!1;CL:0002040!9.79e-26!1;CL:0002041!9.79e-26!1;CL:0000181!1.87e-19!12;CL:0000417!1.87e-19!12;CL:0000668!1.87e-19!12;CL:0000414!1.87e-19!12;CL:0000412!1.87e-19!12;CL:0000182!1.87e-19!12;CL:0000893!1.37e-13!2;CL:0002489!1.37e-13!2;CL:0000809!1.37e-13!2;CL:0000808!1.37e-13!2;CL:0000894!1.37e-13!2;CL:0000806!1.37e-13!2;CL:0000807!1.37e-13!2;CL:0000805!1.37e-13!2;CL:0002425!1.37e-13!2|ontology_enrichment_celltype_v019=CL:0000182;8.61e-38;12|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58|ontology_enrichment_development_v019=UBERON:0004161;4.07e-41;11!UBERON:0009497;5.63e-35;13!UBERON:0001041;9.12e-16;30!UBERON:0003104;5.89e-15;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;7.51e-13;39!DOID:1036;1.80e-07;8|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39;DOID:1036,1.80e-07,8|ontology_enrichment_uberon=UBERON:0001301!7.62e-26!1;UBERON:0005057!8.97e-16!26;UBERON:0002107!1.45e-12!19;UBERON:0006925!1.45e-12!19;UBERON:0008836!1.45e-12!19;UBERON:0002368!7.69e-12!35;UBERON:0008835!6.05e-11!22;UBERON:0003894!6.05e-11!22;UBERON:0009854!1.69e-10!23;UBERON:0007499!1.04e-09!25;UBERON:0009497!1.04e-09!25;UBERON:0000015!1.04e-09!25;UBERON:0002423!1.04e-09!25;UBERON:0006235!1.04e-09!25;UBERON:0004161!1.04e-09!25;UBERON:0006947!1.54e-09!3;UBERON:0004054!1.54e-09!3;UBERON:0009856!2.31e-09!26;UBERON:0000949!2.65e-09!45;UBERON:0002365!5.94e-08!31;UBERON:0002330!5.94e-08!31;UBERON:0003929!8.16e-08!54;UBERON:0005172!1.10e-07!55;UBERON:0005173!1.10e-07!55;UBERON:0005904!1.80e-07!4;UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4;UBERON:0002530!3.50e-07!59;UBERON:0002417!5.78e-07!61;UBERON:0000916!5.78e-07!61|ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;3.81e-14;31!UBERON:0002330;3.81e-14;31!UBERON:0002368;2.43e-13;33!UBERON:0000949;2.01e-10;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6482077561262,5.35703079477582,5.72930122760572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@UGGT1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15663 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=90bp_to_AK074376_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_7_at_UGGT1_5end | |||
|id=chr2:128928131..128928144,+ | |||
|ontology_enrichment_celltype=CL:0002127!9.79e-26!1;CL:0000914!9.79e-26!1;CL:0000911!9.79e-26!1;CL:0000814!9.79e-26!1;CL:0002042!9.79e-26!1;CL:0002039!9.79e-26!1;CL:0002040!9.79e-26!1;CL:0002041!9.79e-26!1;CL:0000181!1.87e-19!12;CL:0000417!1.87e-19!12;CL:0000668!1.87e-19!12;CL:0000414!1.87e-19!12;CL:0000412!1.87e-19!12;CL:0000182!1.87e-19!12;CL:0000893!1.37e-13!2;CL:0002489!1.37e-13!2;CL:0000809!1.37e-13!2;CL:0000808!1.37e-13!2;CL:0000894!1.37e-13!2;CL:0000806!1.37e-13!2;CL:0000807!1.37e-13!2;CL:0000805!1.37e-13!2;CL:0002425!1.37e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.61e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.07e-41;11!UBERON:0009497;5.63e-35;13!UBERON:0001041;9.12e-16;30!UBERON:0003104;5.89e-15;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.51e-13;39!DOID:1036;1.80e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39;DOID:1036,1.80e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001301!7.62e-26!1;UBERON:0005057!8.97e-16!26;UBERON:0002107!1.45e-12!19;UBERON:0006925!1.45e-12!19;UBERON:0008836!1.45e-12!19;UBERON:0002368!7.69e-12!35;UBERON:0008835!6.05e-11!22;UBERON:0003894!6.05e-11!22;UBERON:0009854!1.69e-10!23;UBERON:0007499!1.04e-09!25;UBERON:0009497!1.04e-09!25;UBERON:0000015!1.04e-09!25;UBERON:0002423!1.04e-09!25;UBERON:0006235!1.04e-09!25;UBERON:0004161!1.04e-09!25;UBERON:0006947!1.54e-09!3;UBERON:0004054!1.54e-09!3;UBERON:0009856!2.31e-09!26;UBERON:0000949!2.65e-09!45;UBERON:0002365!5.94e-08!31;UBERON:0002330!5.94e-08!31;UBERON:0003929!8.16e-08!54;UBERON:0005172!1.10e-07!55;UBERON:0005173!1.10e-07!55;UBERON:0005904!1.80e-07!4;UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4;UBERON:0002530!3.50e-07!59;UBERON:0002417!5.78e-07!61;UBERON:0000916!5.78e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;3.81e-14;31!UBERON:0002330;3.81e-14;31!UBERON:0002368;2.43e-13;33!UBERON:0000949;2.01e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6482077561262,5.35703079477582,5.72930122760572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@UGGT1 | |||
}} |
Revision as of 13:27, 12 September 2013
Short description: | p7@UGGT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_UGGT1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 90bp_to_AK074376_5end |
EntrezGene: | UGGT1 |
HGNC: | 15663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.38e-12 | 39 |
chronic leukemia | 1.80e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.