FFCP PHASE1:Hg19::chr2:216301027..216301035,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=51bp_to_ENST00000412951_5end|description=CAGE_peak_6_at_ENST00000412951_5end|id=chr2:216301027..216301035,+|ontology_enrichment_celltype=CL:0000188!1.71e-09!9;CL:0000055!1.29e-08!180;CL:0000680!1.28e-07!57;CL:0000056!1.28e-07!57;CL:0000355!1.28e-07!57|ontology_enrichment_celltype_v019=CL:0002541;2.23e-40;3!CL:0000349;1.49e-17;19!CL:0000511;1.50e-14;1!CL:0002625;1.50e-14;1!CL:0000216;1.50e-14;1!CL:0002536;6.35e-08;2!CL:0002596;6.35e-08;2|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-40,3;CL:0000349,1.17e-17,19;CL:0000511,1.07e-14,1;CL:0002625,1.07e-14,1;CL:0000216,1.07e-14,1;CL:0002536,4.69e-08,2;CL:0002596,6.15e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!4.18e-14!14;UBERON:0000158!4.18e-14!14;UBERON:0000478!1.18e-09!24;UBERON:0004871!2.00e-09!8;UBERON:0000305!5.70e-08!7;UBERON:0004290!6.40e-08!70;UBERON:0003124!9.41e-08!7;UBERON:0000914!1.66e-07!83;UBERON:0002329!1.66e-07!83;UBERON:0003077!1.66e-07!83;UBERON:0003059!1.66e-07!83;UBERON:0007282!1.66e-07!83;UBERON:0009618!1.66e-07!83;UBERON:0007285!1.66e-07!83;UBERON:0004923!1.81e-07!57;UBERON:0000486!3.86e-07!82;UBERON:0002385!4.87e-07!63;UBERON:0001015!4.87e-07!63;UBERON:0000383!4.87e-07!63|ontology_enrichment_uberon_v019=UBERON:0003124;2.23e-40;3!UBERON:0000920;2.23e-40;3!UBERON:0005631;2.93e-33;10!UBERON:0000158;2.93e-33;10!UBERON:0001000;1.50e-14;1!UBERON:0001136;1.50e-14;1!UBERON:0001343;1.50e-14;1!UBERON:0004910;1.50e-14;1!UBERON:0004813;1.50e-14;1!UBERON:0005352;1.50e-14;1!UBERON:0005904;3.60e-14;4!UBERON:0000478;6.70e-14;24!UBERON:0000305;1.27e-08;7!UBERON:0004909;6.35e-08;2!UBERON:0005396;6.35e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-40,3;UBERON:0005631,6.14e-24,14;UBERON:0000158,6.14e-24,14;UBERON:0003124,8.79e-18,7;UBERON:0004871,8.56e-16,8;UBERON:0001136,1.07e-14,1;UBERON:0001343,1.07e-14,1;UBERON:0004910,1.07e-14,1;UBERON:0005154,1.07e-14,1;UBERON:0005295,1.07e-14,1;UBERON:0004813,1.07e-14,1;UBERON:0005297,1.07e-14,1;UBERON:0005294,1.07e-14,1;UBERON:0010141,1.07e-14,1;UBERON:0005891,1.07e-14,1;UBERON:0001000,1.23e-14,1;UBERON:0005352,1.23e-14,1;UBERON:0005904,2.76e-14,4;UBERON:0000478,5.55e-14,24;UBERON:0000305,1.05e-08,7;UBERON:0004909,5.37e-08,2;UBERON:0005396,6.15e-08,2;UBERON:0004923,4.93e-07,66|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,1.84636884759917,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31022952033047,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0,0.605429710579726,0,0,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.328508624055237,0,0.348631135379878,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.614014698904518,0.413509717453592,0.537101224341368,0.435050081742686,0.511359764496605,0.0890320356467374,0,0,1.02090169995667,0,0,0,0.6970372701606,0,0,0,0.37064843820784,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.95460974377781,1.56989728039846,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=51bp_to_ENST00000412951_5end | |||
|description=CAGE_peak_6_at_ENST00000412951_5end | |||
|id=chr2:216301027..216301035,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.71e-09!9;CL:0000055!1.29e-08!180;CL:0000680!1.28e-07!57;CL:0000056!1.28e-07!57;CL:0000355!1.28e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.23e-40;3!CL:0000349;1.49e-17;19!CL:0000511;1.50e-14;1!CL:0002625;1.50e-14;1!CL:0000216;1.50e-14;1!CL:0002536;6.35e-08;2!CL:0002596;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-40,3;CL:0000349,1.17e-17,19;CL:0000511,1.07e-14,1;CL:0002625,1.07e-14,1;CL:0000216,1.07e-14,1;CL:0002536,4.69e-08,2;CL:0002596,6.15e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.18e-14!14;UBERON:0000158!4.18e-14!14;UBERON:0000478!1.18e-09!24;UBERON:0004871!2.00e-09!8;UBERON:0000305!5.70e-08!7;UBERON:0004290!6.40e-08!70;UBERON:0003124!9.41e-08!7;UBERON:0000914!1.66e-07!83;UBERON:0002329!1.66e-07!83;UBERON:0003077!1.66e-07!83;UBERON:0003059!1.66e-07!83;UBERON:0007282!1.66e-07!83;UBERON:0009618!1.66e-07!83;UBERON:0007285!1.66e-07!83;UBERON:0004923!1.81e-07!57;UBERON:0000486!3.86e-07!82;UBERON:0002385!4.87e-07!63;UBERON:0001015!4.87e-07!63;UBERON:0000383!4.87e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.23e-40;3!UBERON:0000920;2.23e-40;3!UBERON:0005631;2.93e-33;10!UBERON:0000158;2.93e-33;10!UBERON:0001000;1.50e-14;1!UBERON:0001136;1.50e-14;1!UBERON:0001343;1.50e-14;1!UBERON:0004910;1.50e-14;1!UBERON:0004813;1.50e-14;1!UBERON:0005352;1.50e-14;1!UBERON:0005904;3.60e-14;4!UBERON:0000478;6.70e-14;24!UBERON:0000305;1.27e-08;7!UBERON:0004909;6.35e-08;2!UBERON:0005396;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-40,3;UBERON:0005631,6.14e-24,14;UBERON:0000158,6.14e-24,14;UBERON:0003124,8.79e-18,7;UBERON:0004871,8.56e-16,8;UBERON:0001136,1.07e-14,1;UBERON:0001343,1.07e-14,1;UBERON:0004910,1.07e-14,1;UBERON:0005154,1.07e-14,1;UBERON:0005295,1.07e-14,1;UBERON:0004813,1.07e-14,1;UBERON:0005297,1.07e-14,1;UBERON:0005294,1.07e-14,1;UBERON:0010141,1.07e-14,1;UBERON:0005891,1.07e-14,1;UBERON:0001000,1.23e-14,1;UBERON:0005352,1.23e-14,1;UBERON:0005904,2.76e-14,4;UBERON:0000478,5.55e-14,24;UBERON:0000305,1.05e-08,7;UBERON:0004909,5.37e-08,2;UBERON:0005396,6.15e-08,2;UBERON:0004923,4.93e-07,66 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,1.84636884759917,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31022952033047,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0,0.605429710579726,0,0,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.328508624055237,0,0.348631135379878,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.614014698904518,0.413509717453592,0.537101224341368,0.435050081742686,0.511359764496605,0.0890320356467374,0,0,1.02090169995667,0,0,0,0.6970372701606,0,0,0,0.37064843820784,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.95460974377781,1.56989728039846,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,3.8605408508243,0.307160702099232,0,0,0.556543525114529,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91400695839152,2.74792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.202210631562555,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0,0.457680136793847,0.302461847526478,0,0,0,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0,0,0.363697318405119,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,1.05522746615772,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p6@ENST00000412951 | |||
}} |
Revision as of 16:41, 12 September 2013
Short description: | p6@ENST00000412951 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ENST00000412951_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_ENST00000412951_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.71e-40 | 3 |
extraembryonic cell | 1.17e-17 | 19 |
androgen binding protein secreting cell | 1.07e-14 | 1 |
seminiferous tubule epithelial cell | 1.07e-14 | 1 |
Sertoli cell | 1.07e-14 | 1 |
amniotic epithelial cell | 4.69e-08 | 2 |
smooth muscle cell of the carotid artery | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.71e-40 | 3 |
extraembryonic membrane | 6.14e-24 | 14 |
membranous layer | 6.14e-24 | 14 |
chorion | 8.79e-18 | 7 |
somatic layer of lateral plate mesoderm | 8.56e-16 | 8 |
mesothelium | 1.07e-14 | 1 |
seminiferous tubule of testis | 1.07e-14 | 1 |
epithelium of male gonad | 1.07e-14 | 1 |
epithelial cord | 1.07e-14 | 1 |
sex cord | 1.07e-14 | 1 |
seminiferous tubule epithelium | 1.07e-14 | 1 |
testis sex cord | 1.07e-14 | 1 |
genital ridge | 1.07e-14 | 1 |
primitive sex cord of indifferent gonad | 1.07e-14 | 1 |
coelomic epithelium | 1.07e-14 | 1 |
vas deferens | 1.23e-14 | 1 |
spermatic cord | 1.23e-14 | 1 |
duct of male reproductive system | 2.76e-14 | 4 |
extraembryonic structure | 5.55e-14 | 24 |
amnion | 1.05e-08 | 7 |
epithelium of gonad | 5.37e-08 | 2 |
carotid artery segment | 6.15e-08 | 2 |
organ component layer | 4.93e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.