FFCP PHASE1:Hg19::chr2:26915117..26915159,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6278|TSSclassifier=S|UniProt=B9EIJ4|association_with_transcript=-398bp_to_ENST00000538762_5end|description=CAGE_peak_4_at_KCNK3_5end|id=chr2:26915117..26915159,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000319;1.24e-10;1!CL:0002553;2.62e-10;1|ontology_enrichment_celltype_v019_2=CL:0000319,1.19e-10,1;CL:0002553,1.73e-10,1|ontology_enrichment_development_v019=UBERON:0007297;2.06e-19;2!UBERON:0005754;7.40e-11;1!UBERON:0003124;9.82e-11;1!UBERON:0003918;4.95e-09;10!UBERON:0007687;4.95e-09;10!UBERON:0007123;2.68e-08;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;1.24e-10;1|ontology_enrichment_disease_v019_2=DOID:3030,1.19e-10,1|ontology_enrichment_uberon=UBERON:0007023!1.99e-21!115;UBERON:0000489!1.40e-08!32;UBERON:0002113!6.19e-08!27;UBERON:0003918!6.19e-08!27;UBERON:0005095!6.19e-08!27;UBERON:0007687!6.19e-08!27;UBERON:0002298!2.26e-07!8;UBERON:0003887!2.79e-07!21;UBERON:0003135!4.22e-07!11;UBERON:0006947!4.91e-07!3;UBERON:0004054!4.91e-07!3;UBERON:0000073!5.27e-07!94;UBERON:0001016!5.27e-07!94;UBERON:0001049!6.22e-07!57;UBERON:0005068!6.22e-07!57;UBERON:0006241!6.22e-07!57;UBERON:0007135!6.22e-07!57|ontology_enrichment_uberon_v019=UBERON:0006947;6.22e-28;3!UBERON:0004054;6.22e-28;3!UBERON:0005904;4.02e-21;4!UBERON:0000998;7.40e-11;1!UBERON:0006868;7.40e-11;1!UBERON:0002171;1.24e-10;1!UBERON:0006518;1.24e-10;1!UBERON:0008949;1.24e-10;1!UBERON:0000101;1.24e-10;1!UBERON:0002167;1.24e-10;1!UBERON:0007029;2.62e-10;1!UBERON:0001000;2.62e-10;1!UBERON:0001301;2.62e-10;1!UBERON:0005352;2.62e-10;1!UBERON:0000058;8.72e-09;10!UBERON:0002046;2.68e-08;5!UBERON:0003135;4.96e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.08e-27,3;UBERON:0004054,1.08e-27,3;UBERON:0005904,6.07e-21,4;UBERON:0000998,7.40e-11,1;UBERON:0006868,7.40e-11,1;UBERON:0002171,1.30e-10,1;UBERON:0006518,1.30e-10,1;UBERON:0008949,1.30e-10,1;UBERON:0000101,1.30e-10,1;UBERON:0002167,1.30e-10,1;UBERON:0007029,2.08e-10,1;UBERON:0001000,3.29e-10,1;UBERON:0005352,3.29e-10,1;UBERON:0001301,3.61e-10,1;UBERON:0002113,9.79e-09,26;UBERON:0003918,9.79e-09,26;UBERON:0011143,9.79e-09,26;UBERON:0005095,9.79e-09,26;UBERON:0007687,9.79e-09,26;UBERON:0002046,2.19e-08,5;UBERON:0004117,2.19e-08,5;UBERON:0007689,2.19e-08,5;UBERON:0007123,2.19e-08,5;UBERON:0003091,2.19e-08,5;UBERON:0003135,5.74e-08,11;UBERON:0000489,2.69e-07,31|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46329140498388,0,0,0.949964660035881,0,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.671624264166535,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,5.89936136621401,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0,0.461701551022782,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0,0,1.99052386215701,0.619202951523374,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0,1.18375320854817,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.04836000945218,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.551639951094387,0.786818822024972,0,0.179287339332845,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0.517131825446202,0.66116300871345,0,0,0.533937062838473,9.11784969578063,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6278 | |||
|TSSclassifier=S | |||
|UniProt=B9EIJ4 | |||
|association_with_transcript=-398bp_to_ENST00000538762_5end | |||
|description=CAGE_peak_4_at_KCNK3_5end | |||
|id=chr2:26915117..26915159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.24e-10;1!CL:0002553;2.62e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.19e-10,1;CL:0002553,1.73e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.06e-19;2!UBERON:0005754;7.40e-11;1!UBERON:0003124;9.82e-11;1!UBERON:0003918;4.95e-09;10!UBERON:0007687;4.95e-09;10!UBERON:0007123;2.68e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.24e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.19e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-21!115;UBERON:0000489!1.40e-08!32;UBERON:0002113!6.19e-08!27;UBERON:0003918!6.19e-08!27;UBERON:0005095!6.19e-08!27;UBERON:0007687!6.19e-08!27;UBERON:0002298!2.26e-07!8;UBERON:0003887!2.79e-07!21;UBERON:0003135!4.22e-07!11;UBERON:0006947!4.91e-07!3;UBERON:0004054!4.91e-07!3;UBERON:0000073!5.27e-07!94;UBERON:0001016!5.27e-07!94;UBERON:0001049!6.22e-07!57;UBERON:0005068!6.22e-07!57;UBERON:0006241!6.22e-07!57;UBERON:0007135!6.22e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.22e-28;3!UBERON:0004054;6.22e-28;3!UBERON:0005904;4.02e-21;4!UBERON:0000998;7.40e-11;1!UBERON:0006868;7.40e-11;1!UBERON:0002171;1.24e-10;1!UBERON:0006518;1.24e-10;1!UBERON:0008949;1.24e-10;1!UBERON:0000101;1.24e-10;1!UBERON:0002167;1.24e-10;1!UBERON:0007029;2.62e-10;1!UBERON:0001000;2.62e-10;1!UBERON:0001301;2.62e-10;1!UBERON:0005352;2.62e-10;1!UBERON:0000058;8.72e-09;10!UBERON:0002046;2.68e-08;5!UBERON:0003135;4.96e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.08e-27,3;UBERON:0004054,1.08e-27,3;UBERON:0005904,6.07e-21,4;UBERON:0000998,7.40e-11,1;UBERON:0006868,7.40e-11,1;UBERON:0002171,1.30e-10,1;UBERON:0006518,1.30e-10,1;UBERON:0008949,1.30e-10,1;UBERON:0000101,1.30e-10,1;UBERON:0002167,1.30e-10,1;UBERON:0007029,2.08e-10,1;UBERON:0001000,3.29e-10,1;UBERON:0005352,3.29e-10,1;UBERON:0001301,3.61e-10,1;UBERON:0002113,9.79e-09,26;UBERON:0003918,9.79e-09,26;UBERON:0011143,9.79e-09,26;UBERON:0005095,9.79e-09,26;UBERON:0007687,9.79e-09,26;UBERON:0002046,2.19e-08,5;UBERON:0004117,2.19e-08,5;UBERON:0007689,2.19e-08,5;UBERON:0007123,2.19e-08,5;UBERON:0003091,2.19e-08,5;UBERON:0003135,5.74e-08,11;UBERON:0000489,2.69e-07,31 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46329140498388,0,0,0.949964660035881,0,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.671624264166535,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,5.89936136621401,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0,0.461701551022782,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0,0,1.99052386215701,0.619202951523374,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0,1.18375320854817,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.04836000945218,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.551639951094387,0.786818822024972,0,0.179287339332845,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0.517131825446202,0.66116300871345,0,0,0.533937062838473,9.11784969578063,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.54604819096007,0,0,0,0,0.318004350653419,0,1.60114149657094,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,3.81420191699347,0,0,0.203909198930495,0.131545547125698,0,0,0.941917114206168,0,0,0,3.23891386827932,3.34426181520935,0.142953088353313,0.47404083519818,0,0,0,0,0.3414369541879,0,0,0,0,6.35080575286394,0,0.31020638566432,0,0,0,0,0,0,0,1.45713297917742,0,0.596852325484105,0,0,0.109940516745429,0.301925687133347,0.463044948647668,0.874238242015829,0.470317296361523,0,0,0.392616934229891,0,0,0,0.281951753939561,0.773494655682926,0,0.71421575442263,0.705789743431384,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.760191006068622,0.101988829741982,0,0.18378979906969,0,0.227336094654718,0,0,0,0,0.23806443146374,0.0645889098360061,0,1.6819779387092,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p4@KCNK3 | |||
}} |
Revision as of 18:03, 12 September 2013
Short description: | p4@KCNK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KCNK3_5end |
Coexpression cluster: | NA |
Association with transcript: | -398bp_to_ENST00000538762_5end |
EntrezGene: | KCNK3 |
HGNC: | 6278 |
UniProt: | B9EIJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.19e-10 | 1 |
lung fibroblast | 1.73e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.08e-27 | 3 |
internal male genitalia | 1.08e-27 | 3 |
duct of male reproductive system | 6.07e-21 | 4 |
seminal vesicle | 7.40e-11 | 1 |
seminal fluid secreting gland | 7.40e-11 | 1 |
lower lobe of right lung | 1.30e-10 | 1 |
right lung lobe | 1.30e-10 | 1 |
lower lobe of lung | 1.30e-10 | 1 |
lobe of lung | 1.30e-10 | 1 |
right lung | 1.30e-10 | 1 |
surface | 2.08e-10 | 1 |
vas deferens | 3.29e-10 | 1 |
spermatic cord | 3.29e-10 | 1 |
epididymis | 3.61e-10 | 1 |
kidney | 9.79e-09 | 26 |
kidney mesenchyme | 9.79e-09 | 26 |
upper urinary tract | 9.79e-09 | 26 |
kidney rudiment | 9.79e-09 | 26 |
kidney field | 9.79e-09 | 26 |
thyroid gland | 2.19e-08 | 5 |
pharyngeal pouch | 2.19e-08 | 5 |
thyroid diverticulum | 2.19e-08 | 5 |
pharyngeal pouch 2 | 2.19e-08 | 5 |
thyroid primordium | 2.19e-08 | 5 |
male reproductive organ | 5.74e-08 | 11 |
cavitated compound organ | 2.69e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.19e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.