FFCP PHASE1:Mm9::chr10:96980294..96980307,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:96980294..96980307,+|id=chr10:96980294..96980307,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,4.23e-11,6;CL:0000187,4.23e-11,6;CL:0000056,4.23e-11,6;CL:0000222,2.41e-09,7;CL:0000355,5.20e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.34e-07!23;UBERON:0001009!1.34e-07!23;UBERON:0003914!1.58e-07!47;UBERON:0000926!8.13e-07!193;UBERON:0004120!8.13e-07!193;UBERON:0006603!8.13e-07!193;UBERON:0000468!9.74e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000474,9.65e-11,9;UBERON:0003134,2.16e-09,8;UBERON:0003100,1.80e-08,11;UBERON:0000947,1.19e-07,4;UBERON:0001637,1.19e-07,4;UBERON:0004573,1.19e-07,4;UBERON:0003509,1.19e-07,4;UBERON:0004571,1.19e-07,4;UBERON:0010191,1.19e-07,4;UBERON:0004572,1.19e-07,4;UBERON:0005156,1.47e-07,26;UBERON:0000990,1.47e-07,26;UBERON:0003133,4.82e-07,24;UBERON:0001134,5.20e-07,9;UBERON:0002036,5.20e-07,9;UBERON:0002385,5.20e-07,9;UBERON:0000486,5.20e-07,9;UBERON:0007503,5.20e-07,9;UBERON:0001015,5.20e-07,9;UBERON:0002329,5.20e-07,9;UBERON:0003082,5.20e-07,9;UBERON:0003059,5.20e-07,9;UBERON:0007282,5.20e-07,9;UBERON:0004290,5.20e-07,9;UBERON:0009618,5.20e-07,9|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8662440354303,31.528225609269,4.9557623083654,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,5.14518872071894,3.72493471920384,3.09403255366465,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0.075726193333184,0.302286240427142,0.869593466105033,12.0459342777394,0,0,1.29955283489534,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0.593768556259299,0.346970653532272,0,0.691846491768175,0.60289056221049,1.05829836422134,0.376999773989026,0.988779870937496,1.59059292611903,0,1.7794353494215,0.883366073841574,8.727754556434,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,4.68461073711455,0.995255764880744,1.0108910337347,0.841767423545896,0,0.919608417733892,0.900310649026746,2.56198190320716,0.748401490664606,1.2811372028485,1.40552586839593,2.58703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,2.78047249225598,1.0447564995665,2.05782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,0.817357396570186,0.987359099480883,2.95501435342371,1.78351381000883,1.02339991197733,0.658650345873152,2.14730270016595,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0.494096864172033,1.00534083520108,0.795825888164603,0.974820435595601,0.898819408654221,0.432276099749388,1.1948476395262,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.350679099451593,0.442655759869801,0.295220295959204,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.486405680325106,0.549122826376163,7.18841032636773,1.48856379067401,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.651859905768103,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0,0,0.478364305972461,0.983179888294428,0.863424909329478,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.163934945376675,0.757412781613119,0,0,0,0,0,0,0,0,0.790575555893047,0,1.84522110770749,2.13678724400706,2.76907830901079,2.47455184458803,0,0,0.604647113929502,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.535106452806212,1.31639216481697,0.304464949114599,0.23467170806371,1.48282449604674,0.220528398054962,0.65954501176592,0.484393280087717,0.904693873922338,1.67121281604391,0.328281799490123,1.1659233465194,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,1.42323626988794,1.18805874903981,1.25452977608681,0.87345025498471,1.75323650300267,1.48776220305605,1.30877970992015,0.388844919875379,1.24267862617385,0,0,0.330916980914195,0.583353565032143,0.129159823477731,1.520605129417,2.58185925020659,2.21347454234715,0.629156066554265,0.483168241652012,0.288030006257865,0,0.608175645870493,0.924398614483445,0.389762468933385,0.358053391334963,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0,0.384847366561318,0.350630706544707,1.81384306892169,0,0,0,3.67060228661162,4.69206188627955,3.29672923681077,1.71494703263253,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.6667401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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:96980294..96980307,+ | |||
|id=chr10:96980294..96980307,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.23e-11,6;CL:0000187,4.23e-11,6;CL:0000056,4.23e-11,6;CL:0000222,2.41e-09,7;CL:0000355,5.20e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.34e-07!23;UBERON:0001009!1.34e-07!23;UBERON:0003914!1.58e-07!47;UBERON:0000926!8.13e-07!193;UBERON:0004120!8.13e-07!193;UBERON:0006603!8.13e-07!193;UBERON:0000468!9.74e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,9.65e-11,9;UBERON:0003134,2.16e-09,8;UBERON:0003100,1.80e-08,11;UBERON:0000947,1.19e-07,4;UBERON:0001637,1.19e-07,4;UBERON:0004573,1.19e-07,4;UBERON:0003509,1.19e-07,4;UBERON:0004571,1.19e-07,4;UBERON:0010191,1.19e-07,4;UBERON:0004572,1.19e-07,4;UBERON:0005156,1.47e-07,26;UBERON:0000990,1.47e-07,26;UBERON:0003133,4.82e-07,24;UBERON:0001134,5.20e-07,9;UBERON:0002036,5.20e-07,9;UBERON:0002385,5.20e-07,9;UBERON:0000486,5.20e-07,9;UBERON:0007503,5.20e-07,9;UBERON:0001015,5.20e-07,9;UBERON:0002329,5.20e-07,9;UBERON:0003082,5.20e-07,9;UBERON:0003059,5.20e-07,9;UBERON:0007282,5.20e-07,9;UBERON:0004290,5.20e-07,9;UBERON:0009618,5.20e-07,9 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8662440354303,31.528225609269,4.9557623083654,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,5.14518872071894,3.72493471920384,3.09403255366465,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0.075726193333184,0.302286240427142,0.869593466105033,12.0459342777394,0,0,1.29955283489534,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0.593768556259299,0.346970653532272,0,0.691846491768175,0.60289056221049,1.05829836422134,0.376999773989026,0.988779870937496,1.59059292611903,0,1.7794353494215,0.883366073841574,8.727754556434,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,4.68461073711455,0.995255764880744,1.0108910337347,0.841767423545896,0,0.919608417733892,0.900310649026746,2.56198190320716,0.748401490664606,1.2811372028485,1.40552586839593,2.58703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,2.78047249225598,1.0447564995665,2.05782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,0.817357396570186,0.987359099480883,2.95501435342371,1.78351381000883,1.02339991197733,0.658650345873152,2.14730270016595,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0.494096864172033,1.00534083520108,0.795825888164603,0.974820435595601,0.898819408654221,0.432276099749388,1.1948476395262,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.350679099451593,0.442655759869801,0.295220295959204,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.486405680325106,0.549122826376163,7.18841032636773,1.48856379067401,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.651859905768103,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0,0,0.478364305972461,0.983179888294428,0.863424909329478,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.163934945376675,0.757412781613119,0,0,0,0,0,0,0,0,0.790575555893047,0,1.84522110770749,2.13678724400706,2.76907830901079,2.47455184458803,0,0,0.604647113929502,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.535106452806212,1.31639216481697,0.304464949114599,0.23467170806371,1.48282449604674,0.220528398054962,0.65954501176592,0.484393280087717,0.904693873922338,1.67121281604391,0.328281799490123,1.1659233465194,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,1.42323626988794,1.18805874903981,1.25452977608681,0.87345025498471,1.75323650300267,1.48776220305605,1.30877970992015,0.388844919875379,1.24267862617385,0,0,0.330916980914195,0.583353565032143,0.129159823477731,1.520605129417,2.58185925020659,2.21347454234715,0.629156066554265,0.483168241652012,0.288030006257865,0,0.608175645870493,0.924398614483445,0.389762468933385,0.358053391334963,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0,0.384847366561318,0.350630706544707,1.81384306892169,0,0,0,3.67060228661162,4.69206188627955,3.29672923681077,1.71494703263253,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.206035057238894,0.64183841918363,0.505394423527595,0,0.188626341386076,1.12369808963859,0.768301828858431,0.459483751644906,0,0.463537303779422,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,1.0174249164263,0.282328141245992,0.676916863133412,0.365855945745545,1.57841826862706,0.407412341537585,0.561142271657738,0.593175090620871,0.591026894253381,1.22769312950907,0,1.54325288784913,0.749431733813838,0.935726433781634,0.859484216193193,0.57386499620653,1.54413993383661,1.85494268496337 | |||
|short_description=p@chr10:96980294..96980307,+ | |||
}} |
Revision as of 18:06, 12 September 2013
Short description: | p@chr10:96980294..96980307, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96980294..96980307, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.23e-11 | 6 |
muscle cell | 4.23e-11 | 6 |
myoblast | 4.23e-11 | 6 |
mesodermal cell | 2.41e-09 | 7 |
multi-potent skeletal muscle stem cell | 5.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
female reproductive system | 9.65e-11 | 9 |
female reproductive organ | 2.16e-09 | 8 |
female organism | 1.80e-08 | 11 |
aorta | 1.19e-07 | 4 |
artery | 1.19e-07 | 4 |
systemic artery | 1.19e-07 | 4 |
arterial blood vessel | 1.19e-07 | 4 |
systemic arterial system | 1.19e-07 | 4 |
aortic system | 1.19e-07 | 4 |
arterial system | 1.19e-07 | 4 |
reproductive structure | 1.47e-07 | 26 |
reproductive system | 1.47e-07 | 26 |
reproductive organ | 4.82e-07 | 24 |
skeletal muscle tissue | 5.20e-07 | 9 |
striated muscle tissue | 5.20e-07 | 9 |
muscle tissue | 5.20e-07 | 9 |
multilaminar epithelium | 5.20e-07 | 9 |
epithelial vesicle | 5.20e-07 | 9 |
musculature | 5.20e-07 | 9 |
somite | 5.20e-07 | 9 |
myotome | 5.20e-07 | 9 |
presomitic mesoderm | 5.20e-07 | 9 |
presumptive segmental plate | 5.20e-07 | 9 |
dermomyotome | 5.20e-07 | 9 |
trunk paraxial mesoderm | 5.20e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.