FFCP PHASE1:Hg19::chr3:136676869..136676878,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=53833|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6004|TSSclassifier=S|UniProt=Q8IYY5,F8WC67|association_with_transcript=18bp_to_ENST00000309741,ENST00000469964_5end|coexpression_cluster_id=C2720|description=CAGE_peak_4_at_IL20RB_5end|id=chr3:136676869..136676878,+|ontology_enrichment_celltype=CL:0000066!1.17e-23!254;CL:0002076!1.02e-18!43;CL:0000223!3.07e-14!59;CL:0002159!4.63e-12!13;CL:0002251!9.20e-11!21;CL:0000154!3.38e-09!6;CL:0000076!1.10e-08!62;CL:0000622!5.72e-08!5;CL:0002368!1.07e-07!13;CL:0002321!9.05e-07!248|ontology_enrichment_celltype_v019=CL:0002251;5.83e-24;20!CL:0002076;1.24e-21;42!CL:0002159;1.83e-16;14!CL:0000154;5.18e-16;6!CL:0000622;7.07e-13;5!CL:0002621;2.41e-11;3!CL:0000362;1.10e-10;9!CL:0000240;1.36e-10;6!CL:0000311;1.36e-10;6!CL:0000079;1.36e-10;6!CL:0000237;1.36e-10;6!CL:0000575;6.78e-09;2!CL:0002327;1.28e-08;4!CL:0000317;1.48e-08;2!CL:1000448;1.48e-08;2!CL:0002308;1.48e-08;2!CL:0002140;1.48e-08;2!CL:0000312;9.31e-08;5!CL:0002368;2.88e-07;13!CL:0000150;3.76e-07;9|ontology_enrichment_celltype_v019_2=CL:0002076,1.01e-27,42;CL:0002251,3.40e-24,20;CL:0000066,1.39e-22,253;CL:0000223,5.84e-21,58;CL:0002159,1.26e-16,14;CL:0000154,2.43e-16,6;CL:0000076,5.59e-15,63;CL:0000622,4.39e-13,5;CL:0002621,6.84e-12,3;CL:0000362,8.20e-11,9;CL:0000240,2.12e-10,6;CL:0000311,2.12e-10,6;CL:0000079,2.12e-10,6;CL:0000237,2.12e-10,6;CL:0000036,2.12e-10,6;CL:0000357,2.12e-10,6;CL:0000114,2.12e-10,6;CL:0000575,7.80e-09,2;CL:0000317,8.10e-09,2;CL:1000448,8.10e-09,2;CL:0002308,8.10e-09,2;CL:0002140,8.10e-09,2;CL:0002327,1.45e-08,4;CL:0000312,9.67e-08,5;CL:0002321,1.36e-07,250;CL:0002368,2.92e-07,13;CL:0000150,2.92e-07,9|ontology_enrichment_development_v019=CL:0000223;7.11e-13;58!CL:0000357;1.36e-10;6!CL:0000114;1.36e-10;6!UBERON:0008814;4.04e-08;2!UBERON:0010056;4.04e-08;2|ontology_enrichment_disease=DOID:305!7.99e-14!106;DOID:0050687!8.50e-12!143;DOID:1749!3.35e-08!14|ontology_enrichment_disease_v019=DOID:1749;3.22e-09;14|ontology_enrichment_disease_v019_2=DOID:1749,2.68e-09,14|ontology_enrichment_uberon=UBERON:0001004!2.99e-12!72;UBERON:0003102!1.72e-11!95;UBERON:0004119!2.99e-11!169;UBERON:0000925!2.99e-11!169;UBERON:0006595!2.99e-11!169;UBERON:0000065!3.89e-09!53;UBERON:0001007!1.71e-08!155;UBERON:0001555!1.71e-08!155;UBERON:0007026!1.71e-08!155;UBERON:0001737!3.48e-08!9;UBERON:0000161!2.04e-07!35;UBERON:0001557!3.91e-07!19;UBERON:0000166!5.30e-07!21|ontology_enrichment_uberon_v019=UBERON:0001949;2.41e-11;3!UBERON:0001041;2.24e-09;14!UBERON:0003729;2.40e-09;13!UBERON:0000165;4.78e-09;28!UBERON:0000161;1.15e-08;19!UBERON:0000166;1.15e-08;19!UBERON:0001911;1.28e-08;4!UBERON:0002419;1.48e-08;2!UBERON:0007771;1.48e-08;2!UBERON:0003297;1.48e-08;2!UBERON:0001821;1.48e-08;2!UBERON:0003487;1.48e-08;2!UBERON:0001820;1.48e-08;2!UBERON:0000473;1.80e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.84e-12,3;UBERON:0000166,1.16e-09,22;UBERON:0003729,1.63e-09,13;UBERON:0001004,3.97e-09,74;UBERON:0002419,8.10e-09,2;UBERON:0007771,8.10e-09,2;UBERON:0003297,8.10e-09,2;UBERON:0001821,8.10e-09,2;UBERON:0003487,8.10e-09,2;UBERON:0001820,8.10e-09,2;UBERON:0005089,8.10e-09,2;UBERON:0005088,8.10e-09,2;UBERON:0000165,9.56e-09,29;UBERON:0000930,9.56e-09,29;UBERON:0001911,1.45e-08,4;UBERON:0005333,1.45e-08,4;UBERON:0008425,1.45e-08,4;UBERON:0005311,1.45e-08,4;UBERON:0003102,4.45e-08,99;UBERON:0004119,1.95e-07,160;UBERON:0000925,1.95e-07,160;UBERON:0006595,1.95e-07,160;UBERON:0000473,2.03e-07,8;UBERON:0000153,3.08e-07,62;UBERON:0007811,3.08e-07,62;UBERON:0000033,4.89e-07,56;UBERON:0001444,5.56e-07,49;UBERON:0000161,6.70e-07,36|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,2.18577172975525,3.33705998505986,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0.759783069987479,0,1.43418310374407,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,1.40592859100278,0.312160076830321,0,0,0,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0,0.427114777637135,0.423863802319124,0.600182192168805,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0,0,0,1.73934767846967,1.90922284413584,1.43402297694502,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,1.0647612003586,0.505754070234305,0.723033089650446,0.992645754591546,0.435758888184812,1.18635309555548,0.134831308160164,1.37355025587742,0,0,0,0,0,0,0,0,0,0,0,6.80451769533479,2.24803506515239,3.41798506199545,1.01847289674383,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0.567100388969546,1.25381931783988,1.453169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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=53833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6004 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYY5,F8WC67 | |||
|association_with_transcript=18bp_to_ENST00000309741,ENST00000469964_5end | |||
|coexpression_cluster_id=C2720 | |||
|description=CAGE_peak_4_at_IL20RB_5end | |||
|id=chr3:136676869..136676878,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-23!254;CL:0002076!1.02e-18!43;CL:0000223!3.07e-14!59;CL:0002159!4.63e-12!13;CL:0002251!9.20e-11!21;CL:0000154!3.38e-09!6;CL:0000076!1.10e-08!62;CL:0000622!5.72e-08!5;CL:0002368!1.07e-07!13;CL:0002321!9.05e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002251;5.83e-24;20!CL:0002076;1.24e-21;42!CL:0002159;1.83e-16;14!CL:0000154;5.18e-16;6!CL:0000622;7.07e-13;5!CL:0002621;2.41e-11;3!CL:0000362;1.10e-10;9!CL:0000240;1.36e-10;6!CL:0000311;1.36e-10;6!CL:0000079;1.36e-10;6!CL:0000237;1.36e-10;6!CL:0000575;6.78e-09;2!CL:0002327;1.28e-08;4!CL:0000317;1.48e-08;2!CL:1000448;1.48e-08;2!CL:0002308;1.48e-08;2!CL:0002140;1.48e-08;2!CL:0000312;9.31e-08;5!CL:0002368;2.88e-07;13!CL:0000150;3.76e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.01e-27,42;CL:0002251,3.40e-24,20;CL:0000066,1.39e-22,253;CL:0000223,5.84e-21,58;CL:0002159,1.26e-16,14;CL:0000154,2.43e-16,6;CL:0000076,5.59e-15,63;CL:0000622,4.39e-13,5;CL:0002621,6.84e-12,3;CL:0000362,8.20e-11,9;CL:0000240,2.12e-10,6;CL:0000311,2.12e-10,6;CL:0000079,2.12e-10,6;CL:0000237,2.12e-10,6;CL:0000036,2.12e-10,6;CL:0000357,2.12e-10,6;CL:0000114,2.12e-10,6;CL:0000575,7.80e-09,2;CL:0000317,8.10e-09,2;CL:1000448,8.10e-09,2;CL:0002308,8.10e-09,2;CL:0002140,8.10e-09,2;CL:0002327,1.45e-08,4;CL:0000312,9.67e-08,5;CL:0002321,1.36e-07,250;CL:0002368,2.92e-07,13;CL:0000150,2.92e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;7.11e-13;58!CL:0000357;1.36e-10;6!CL:0000114;1.36e-10;6!UBERON:0008814;4.04e-08;2!UBERON:0010056;4.04e-08;2 | |||
|ontology_enrichment_disease=DOID:305!7.99e-14!106;DOID:0050687!8.50e-12!143;DOID:1749!3.35e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.22e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.68e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.99e-12!72;UBERON:0003102!1.72e-11!95;UBERON:0004119!2.99e-11!169;UBERON:0000925!2.99e-11!169;UBERON:0006595!2.99e-11!169;UBERON:0000065!3.89e-09!53;UBERON:0001007!1.71e-08!155;UBERON:0001555!1.71e-08!155;UBERON:0007026!1.71e-08!155;UBERON:0001737!3.48e-08!9;UBERON:0000161!2.04e-07!35;UBERON:0001557!3.91e-07!19;UBERON:0000166!5.30e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.41e-11;3!UBERON:0001041;2.24e-09;14!UBERON:0003729;2.40e-09;13!UBERON:0000165;4.78e-09;28!UBERON:0000161;1.15e-08;19!UBERON:0000166;1.15e-08;19!UBERON:0001911;1.28e-08;4!UBERON:0002419;1.48e-08;2!UBERON:0007771;1.48e-08;2!UBERON:0003297;1.48e-08;2!UBERON:0001821;1.48e-08;2!UBERON:0003487;1.48e-08;2!UBERON:0001820;1.48e-08;2!UBERON:0000473;1.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.84e-12,3;UBERON:0000166,1.16e-09,22;UBERON:0003729,1.63e-09,13;UBERON:0001004,3.97e-09,74;UBERON:0002419,8.10e-09,2;UBERON:0007771,8.10e-09,2;UBERON:0003297,8.10e-09,2;UBERON:0001821,8.10e-09,2;UBERON:0003487,8.10e-09,2;UBERON:0001820,8.10e-09,2;UBERON:0005089,8.10e-09,2;UBERON:0005088,8.10e-09,2;UBERON:0000165,9.56e-09,29;UBERON:0000930,9.56e-09,29;UBERON:0001911,1.45e-08,4;UBERON:0005333,1.45e-08,4;UBERON:0008425,1.45e-08,4;UBERON:0005311,1.45e-08,4;UBERON:0003102,4.45e-08,99;UBERON:0004119,1.95e-07,160;UBERON:0000925,1.95e-07,160;UBERON:0006595,1.95e-07,160;UBERON:0000473,2.03e-07,8;UBERON:0000153,3.08e-07,62;UBERON:0007811,3.08e-07,62;UBERON:0000033,4.89e-07,56;UBERON:0001444,5.56e-07,49;UBERON:0000161,6.70e-07,36 | |||
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|short_description=p4@IL20RB | |||
}} |
Revision as of 21:43, 12 September 2013
Short description: | p4@IL20RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IL20RB_5end |
Coexpression cluster: | C2720_salivary_cervical_epidermoid_malignant_Keratinocyte_Small_Sebocyte |
Association with transcript: | 18bp_to_ENST00000309741, ENST00000469964_5end |
EntrezGene: | IL20RB |
HGNC: | 6004 |
UniProt: | Q8IYY5F8WC67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.01e-27 | 42 |
epithelial cell of alimentary canal | 3.40e-24 | 20 |
epithelial cell | 1.39e-22 | 253 |
endodermal cell | 5.84e-21 | 58 |
general ecto-epithelial cell | 1.26e-16 | 14 |
protein secreting cell | 2.43e-16 | 6 |
squamous epithelial cell | 5.59e-15 | 63 |
acinar cell | 4.39e-13 | 5 |
gingival epithelial cell | 6.84e-12 | 3 |
epidermal cell | 8.20e-11 | 9 |
stratified squamous epithelial cell | 2.12e-10 | 6 |
keratin accumulating cell | 2.12e-10 | 6 |
stratified epithelial cell | 2.12e-10 | 6 |
keratinizing barrier epithelial cell | 2.12e-10 | 6 |
epithelial fate stem cell | 2.12e-10 | 6 |
stratified epithelial stem cell | 2.12e-10 | 6 |
surface ectodermal cell | 2.12e-10 | 6 |
corneal epithelial cell | 7.80e-09 | 2 |
sebum secreting cell | 8.10e-09 | 2 |
epithelial cell of sweat gland | 8.10e-09 | 2 |
epithelial cell of skin gland | 8.10e-09 | 2 |
acinar cell of sebaceous gland | 8.10e-09 | 2 |
mammary gland epithelial cell | 1.45e-08 | 4 |
keratinocyte | 9.67e-08 | 5 |
embryonic cell | 1.36e-07 | 250 |
respiratory epithelial cell | 2.92e-07 | 13 |
glandular epithelial cell | 2.92e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.84e-12 | 3 |
oral opening | 1.16e-09 | 22 |
mouth mucosa | 1.63e-09 | 13 |
respiratory system | 3.97e-09 | 74 |
skin gland | 8.10e-09 | 2 |
epidermis gland | 8.10e-09 | 2 |
gland of integumental system | 8.10e-09 | 2 |
sebaceous gland | 8.10e-09 | 2 |
skin sebaceous gland | 8.10e-09 | 2 |
sweat gland | 8.10e-09 | 2 |
sweat gland placode | 8.10e-09 | 2 |
sebaceous gland placode | 8.10e-09 | 2 |
mouth | 9.56e-09 | 29 |
stomodeum | 9.56e-09 | 29 |
mammary gland | 1.45e-08 | 4 |
mammary bud | 1.45e-08 | 4 |
mammary ridge | 1.45e-08 | 4 |
mammary placode | 1.45e-08 | 4 |
surface structure | 4.45e-08 | 99 |
endoderm-derived structure | 1.95e-07 | 160 |
endoderm | 1.95e-07 | 160 |
presumptive endoderm | 1.95e-07 | 160 |
testis | 2.03e-07 | 8 |
anterior region of body | 3.08e-07 | 62 |
craniocervical region | 3.08e-07 | 62 |
head | 4.89e-07 | 56 |
subdivision of head | 5.56e-07 | 49 |
orifice | 6.70e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.68e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.