Personal tools

FFCP PHASE1:Mm9::chr13:52692230..52692280,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=1348|UniProt=P48025,Q3UPF7,Q6P1E0|association_with_transcript=0bp_to_NM_011518,uc007qna.1_5end|description=CAGE_peak_1_at_Syk_5end|id=chr13:52692230..52692280,+|ontology_enrichment_celltype=CL:0000049!5.02e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,2.53e-10,19;CL:0000763,3.55e-08,16;CL:0000988,4.41e-07,32;CL:0002032,4.41e-07,32;CL:0000037,4.41e-07,32;CL:0000837,4.41e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!8.96e-13!70;UBERON:0002193!8.58e-12!48;UBERON:0002371!1.26e-10!16;UBERON:0002390!3.88e-10!45;UBERON:0003061!3.88e-10!45;UBERON:0001474!9.33e-10!22;UBERON:0004765!9.33e-10!22;UBERON:0001434!9.33e-10!22;UBERON:0002204!2.63e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.29e-19,48;UBERON:0002405,3.29e-19,48;UBERON:0002390,8.40e-17,45;UBERON:0003061,8.40e-17,45;UBERON:0002371,1.23e-13,16;UBERON:0001474,1.43e-13,22;UBERON:0004765,1.43e-13,22;UBERON:0001434,1.43e-13,22;UBERON:0002204,2.04e-10,32;UBERON:0003081,1.49e-07,87|phase1_expression=0,1.74487703819681,1.81999695755814,0,0,2.01455126294268,2.80335168714631,0.129123323441576,0,0,0,0,0,0,23.3176833270964,36.4455481301687,9.09430441566591,202.684441242668,219.931551503605,213.892384506207,1.36069264241712,32.4681410426895,28.9931765944218,31.5185072903011,30.7408436630008,1.72269589234506,5.59990595006797,3.878482188346,0.190023419456374,0.252030129759931,3.99114919179548,0,0,0,0,0,0,5.02237956884289,3.1253413780952,5.75876118371178,34.1174263057988,28.0048648832963,14.5653105909346,0,0,0,0,0,0,0,0.139986421625363,0,138.420649997632,0.725362142011344,2.01656279485478,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0,0,15.7482450524245,39.554654502679,20.6039233334369,5.69240209984969,3.45796474789399,0,0,0,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.383062014255563,0.614426133024974,0,0,0,0.558365998002762,0,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0.151452386666368,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0.649776417447669,0,4.77511028447956,0,0,0,0,0,0,0,0,0,0,4.11061966988616,75.350924141327,1.48442139064825,0.520455980298408,0.608930956624282,0,0,0.470354828542819,0.251333182659351,0.494389935468748,5.20557684911682,22.9998743506967,2.26473589926373,5.30019644304944,7.27312879702833,1.86391761218122,0.292780797011547,0,1.53274233125155,29.5943357529623,14.9975682748352,24.6516240521746,0,0.915001205637253,0,0.521472960576829,0.511430914660661,1.0389402227978,0.648965052271031,0.407357455401265,7.71323217782577,0.252722758433675,1.05220927943237,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.657587197282725,0.278047249225598,0.696504333044333,2.67516777330327,0.398068533636986,17.5553296828309,13.1247432628505,11.0823764764281,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.820837320395476,0.891756905004413,0.877199924551994,4.17145219052996,1.47627060636409,1.26173969138476,0.102904612379284,0.991256348951394,1.58670339998127,0.213288250535234,0,0.257734922644187,0.80673409849337,0,0,0.474529061544512,0.164698954724011,0,0.994782360205754,0.38992817423824,1.79763881730844,1.08069024937347,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.505892296994058,0.147610147979602,1.09899109488962,0.246794327843601,0.592905254174298,1.50160595144485,2.35870794135844,1.12431056192427,2.43432145666204,1.92941727801933,2.03700681425136,2.5892652370573,2.43202840162553,3.0201755450689,1.43768206527355,4.09355042435354,1.24815069245824,1.01031551178845,0.717589654087649,1.92977408545347,14.5955020231618,0,0.488894929326078,0.169745085775188,0.234690248288502,0.837531287209079,0.952174563544055,1.36593553500459,3.15270288212382,2.21464689648775,2.23236676120482,8.35702905050264,8.63424909329478,5.20736610893442,99.5222473999197,150.117968733964,4.42587845717133,3.31124095565679,0.321101179975584,0.234423373184406,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,0.81443479676788,2.14461159864296,6.63725691699814,0.485561272309963,0.604647113929502,0.565815239267694,1.47650946440386,0.922305443831782,0.516856586336442,0.727067458955011,1.06949213515416,2.84433082142234,2.10837217149998,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,1.07021290561242,0.329098041204242,0.304464949114599,0.704015124191131,0.42366414172764,1.10264199027481,1.31909002353184,0.968786560175433,0.72375509913787,0.477489376012546,0,0.582961673259701,1.29797711407357,39.1294317027083,4.33412422722767,7.22258656741876,12.9974235333237,42.7852932766809,50.5599762786415,35.0155565787342,33.8682514623252,36.3465931105635,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.539457385539283,0.826534557253359,1.57053565190418,1.16653475962614,5.59205381778233,0,0,0,0,0.387479470433193,0.506868376472335,0.352071715937262,0.2604087696879,0,0.241584120826006,0.288030006257865,4.74016680942267,9.32535990334755,10.9900724166365,8.96453678546786,5.01274747868948,4.96703386953162,3.00488623799922,3.39685912501528,2.72609414859999,3.12447907285499,2.11734988787365,2.92373642219257,2.88635524920988,2.57129184799452,0,0,0,0,1.15913756419314,2.25218970541418,0.36630324853453,1.2862102744744,0.501572104035363,1.6942555278512,0,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.824140228955577,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.749132059759059,0.960377286073039,0.574354689556133,0.952587382566147,0.695305955669133,0.38581844092741,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,0.476872379894642,1.30811774969096,1.2234219453993,0.761531471025089,0,1.31534855718921,0.679020569229309,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.619747364743864,0.578719832943424,0.499621155875892,0.935726433781634,1.28922632428979,1.91288332068843,1.32354851471709,0.927471342481686|short_description=p1@Syk}}
|EntrezGene=20963
|HGNC=
|MCL_coexpression_id=1348
|UniProt=P48025,Q3UPF7,Q6P1E0
|association_with_transcript=0bp_to_NM_011518,uc007qna.1_5end
|description=CAGE_peak_1_at_Syk_5end
|id=chr13:52692230..52692280,+
|ontology_enrichment_celltype=CL:0000049!5.02e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000049,2.53e-10,19;CL:0000763,3.55e-08,16;CL:0000988,4.41e-07,32;CL:0002032,4.41e-07,32;CL:0000037,4.41e-07,32;CL:0000837,4.41e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!8.96e-13!70;UBERON:0002193!8.58e-12!48;UBERON:0002371!1.26e-10!16;UBERON:0002390!3.88e-10!45;UBERON:0003061!3.88e-10!45;UBERON:0001474!9.33e-10!22;UBERON:0004765!9.33e-10!22;UBERON:0001434!9.33e-10!22;UBERON:0002204!2.63e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.29e-19,48;UBERON:0002405,3.29e-19,48;UBERON:0002390,8.40e-17,45;UBERON:0003061,8.40e-17,45;UBERON:0002371,1.23e-13,16;UBERON:0001474,1.43e-13,22;UBERON:0004765,1.43e-13,22;UBERON:0001434,1.43e-13,22;UBERON:0002204,2.04e-10,32;UBERON:0003081,1.49e-07,87
|phase1_expression=0,1.74487703819681,1.81999695755814,0,0,2.01455126294268,2.80335168714631,0.129123323441576,0,0,0,0,0,0,23.3176833270964,36.4455481301687,9.09430441566591,202.684441242668,219.931551503605,213.892384506207,1.36069264241712,32.4681410426895,28.9931765944218,31.5185072903011,30.7408436630008,1.72269589234506,5.59990595006797,3.878482188346,0.190023419456374,0.252030129759931,3.99114919179548,0,0,0,0,0,0,5.02237956884289,3.1253413780952,5.75876118371178,34.1174263057988,28.0048648832963,14.5653105909346,0,0,0,0,0,0,0,0.139986421625363,0,138.420649997632,0.725362142011344,2.01656279485478,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0,0,15.7482450524245,39.554654502679,20.6039233334369,5.69240209984969,3.45796474789399,0,0,0,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.383062014255563,0.614426133024974,0,0,0,0.558365998002762,0,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0.151452386666368,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0.649776417447669,0,4.77511028447956,0,0,0,0,0,0,0,0,0,0,4.11061966988616,75.350924141327,1.48442139064825,0.520455980298408,0.608930956624282,0,0,0.470354828542819,0.251333182659351,0.494389935468748,5.20557684911682,22.9998743506967,2.26473589926373,5.30019644304944,7.27312879702833,1.86391761218122,0.292780797011547,0,1.53274233125155,29.5943357529623,14.9975682748352,24.6516240521746,0,0.915001205637253,0,0.521472960576829,0.511430914660661,1.0389402227978,0.648965052271031,0.407357455401265,7.71323217782577,0.252722758433675,1.05220927943237,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.657587197282725,0.278047249225598,0.696504333044333,2.67516777330327,0.398068533636986,17.5553296828309,13.1247432628505,11.0823764764281,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.820837320395476,0.891756905004413,0.877199924551994,4.17145219052996,1.47627060636409,1.26173969138476,0.102904612379284,0.991256348951394,1.58670339998127,0.213288250535234,0,0.257734922644187,0.80673409849337,0,0,0.474529061544512,0.164698954724011,0,0.994782360205754,0.38992817423824,1.79763881730844,1.08069024937347,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.505892296994058,0.147610147979602,1.09899109488962,0.246794327843601,0.592905254174298,1.50160595144485,2.35870794135844,1.12431056192427,2.43432145666204,1.92941727801933,2.03700681425136,2.5892652370573,2.43202840162553,3.0201755450689,1.43768206527355,4.09355042435354,1.24815069245824,1.01031551178845,0.717589654087649,1.92977408545347,14.5955020231618,0,0.488894929326078,0.169745085775188,0.234690248288502,0.837531287209079,0.952174563544055,1.36593553500459,3.15270288212382,2.21464689648775,2.23236676120482,8.35702905050264,8.63424909329478,5.20736610893442,99.5222473999197,150.117968733964,4.42587845717133,3.31124095565679,0.321101179975584,0.234423373184406,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,0.81443479676788,2.14461159864296,6.63725691699814,0.485561272309963,0.604647113929502,0.565815239267694,1.47650946440386,0.922305443831782,0.516856586336442,0.727067458955011,1.06949213515416,2.84433082142234,2.10837217149998,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,1.07021290561242,0.329098041204242,0.304464949114599,0.704015124191131,0.42366414172764,1.10264199027481,1.31909002353184,0.968786560175433,0.72375509913787,0.477489376012546,0,0.582961673259701,1.29797711407357,39.1294317027083,4.33412422722767,7.22258656741876,12.9974235333237,42.7852932766809,50.5599762786415,35.0155565787342,33.8682514623252,36.3465931105635,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.539457385539283,0.826534557253359,1.57053565190418,1.16653475962614,5.59205381778233,0,0,0,0,0.387479470433193,0.506868376472335,0.352071715937262,0.2604087696879,0,0.241584120826006,0.288030006257865,4.74016680942267,9.32535990334755,10.9900724166365,8.96453678546786,5.01274747868948,4.96703386953162,3.00488623799922,3.39685912501528,2.72609414859999,3.12447907285499,2.11734988787365,2.92373642219257,2.88635524920988,2.57129184799452,0,0,0,0,1.15913756419314,2.25218970541418,0.36630324853453,1.2862102744744,0.501572104035363,1.6942555278512,0,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.824140228955577,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.749132059759059,0.960377286073039,0.574354689556133,0.952587382566147,0.695305955669133,0.38581844092741,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,0.476872379894642,1.30811774969096,1.2234219453993,0.761531471025089,0,1.31534855718921,0.679020569229309,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.619747364743864,0.578719832943424,0.499621155875892,0.935726433781634,1.28922632428979,1.91288332068843,1.32354851471709,0.927471342481686
|short_description=p1@Syk
}}

Revision as of 00:45, 13 September 2013

Short description:p1@Syk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Syk_5end
Coexpression cluster:MCL_coexpression_mm9:1348
Association with transcript: 0bp_to_NM_011518, uc007qna.1_5end
EntrezGene:Syk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Syk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2202.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4219.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6213.89
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I928.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D230.74
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2138.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E739.55
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D220.60
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H975.35
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G223.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.65
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.71
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.08
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B114.60
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A199.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1150.12
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G239.13
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D113.00
spleen, neonate N20.CNhs11112.824-19H142.79
spleen, neonate N25.CNhs11099.1354-25G350.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C635.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D336.35
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I210.99
thymus, embryo E16.CNhs11002.456-26C58.96
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system3.29e-1948
immune system3.29e-1948
hematopoietic system8.40e-1745
blood island8.40e-1745
bone marrow1.23e-1316
bone element1.43e-1322
skeletal element1.43e-1322
skeletal system1.43e-1322
musculoskeletal system2.04e-1032
lateral plate mesoderm1.49e-0787







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:52692230..52692280,%2B&oldid=2912213"